BLASTX nr result

ID: Glycyrrhiza32_contig00033342 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00033342
         (321 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU46456.1 hypothetical protein TSUD_402230 [Trifolium subterran...    57   2e-07
GAU12679.1 hypothetical protein TSUD_121710 [Trifolium subterran...    54   2e-06
KYP47844.1 hypothetical protein KK1_030479 [Cajanus cajan]             53   5e-06
GAU51196.1 hypothetical protein TSUD_374470 [Trifolium subterran...    53   6e-06
KYP66749.1 LINE-1 reverse transcriptase isogeny, partial [Cajanu...    53   7e-06
KYP41802.1 hypothetical protein KK1_036824, partial [Cajanus cajan]    52   7e-06

>GAU46456.1 hypothetical protein TSUD_402230 [Trifolium subterraneum]
          Length = 392

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 22/89 (24%)
 Frame = +2

Query: 113 SFSNPAGYVCLGMCLRDASGSFI----------------------QAIQWVQLLGYTRVI 226
           SFS  +  VC+GMC+RD +G F+                      +A+ W+  +  T V 
Sbjct: 248 SFSPMSNKVCIGMCIRDTNGCFVAARTEWMEPILDVDIGEAMGLLRALNWMNEIQLTNVD 307

Query: 227 IETDCKQVVDHLHTARPLLSEFGVILQQC 313
           +E DCK+VVD+L+++R   S+ G IL  C
Sbjct: 308 LEMDCKRVVDNLYSSRTYRSDLGDILSDC 336


>GAU12679.1 hypothetical protein TSUD_121710 [Trifolium subterraneum]
          Length = 225

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 22/85 (25%)
 Frame = +2

Query: 125 PAGYVCLGMCLRDASGSFI----------------------QAIQWVQLLGYTRVIIETD 238
           P     +G CLR+  G FI                      Q ++W+  +GY +VI E D
Sbjct: 86  PEQKASMGACLRNEKGEFITAFSCYTSAVFTPAEAEAWGLLQGLEWIATMGYNKVIFEMD 145

Query: 239 CKQVVDHLHTARPLLSEFGVILQQC 313
           CK VV+ ++  +P  SE+GVI+ +C
Sbjct: 146 CKMVVEDVNRFKPNRSEYGVIINKC 170


>KYP47844.1 hypothetical protein KK1_030479 [Cajanus cajan]
          Length = 271

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 22/78 (28%)
 Frame = +2

Query: 146 GMCLRDASGSF----------------------IQAIQWVQLLGYTRVIIETDCKQVVDH 259
           G+C+RD  G F                      ++AIQ++    Y  V +ETDCKQV DH
Sbjct: 171 GICVRDTRGLFQTAISGWKHGLPPPHEAEAAAMLEAIQYLIHSPYDNVCVETDCKQVADH 230

Query: 260 LHTARPLLSEFGVILQQC 313
           L++ + L SE+G+I+ QC
Sbjct: 231 LNSTQVLHSEYGIIINQC 248


>GAU51196.1 hypothetical protein TSUD_374470 [Trifolium subterraneum]
          Length = 243

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
 Frame = +2

Query: 17  KPLYPTQDFWQKRLHRGGQ*LQQSDWKKLCF*S-FSNPAGYVCLGMCLRDASGSFI---- 181
           KP+ PT +  Q+  H   + L  +++ K    +     +  V +G C+RD  G F+    
Sbjct: 70  KPIQPTLNMQQQEQHNRWK-LPLAEYLKCNIGAALFTLSNQVSMGACIRDDKGHFVAATT 128

Query: 182 ------------------QAIQWVQLLGYTRVIIETDCKQVVDHLHTARPLLSEFGVILQ 307
                             QA+ W++++GY  VI E DCK +VD +HT +  +SE+G ++ 
Sbjct: 129 RYIDVIMTPAEGEAWELQQAMMWMEMIGYHNVIFEMDCK-MVDDVHTQKHNMSEYGSLID 187

Query: 308 QC 313
            C
Sbjct: 188 DC 189


>KYP66749.1 LINE-1 reverse transcriptase isogeny, partial [Cajanus cajan]
          Length = 816

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 22/78 (28%)
 Frame = +2

Query: 146 GMCLRDASGSF----------------------IQAIQWVQLLGYTRVIIETDCKQVVDH 259
           G+C+RD  G F                      ++AIQ++    Y  V +ETDCKQV DH
Sbjct: 684 GICVRDTRGLFQTAISGWKHGLPPPHEAEAAAMLEAIQYLIHSPYDNVCVETDCKQVADH 743

Query: 260 LHTARPLLSEFGVILQQC 313
           L++ + L SE+G+I+ QC
Sbjct: 744 LNSTQVLHSEYGIIINQC 761


>KYP41802.1 hypothetical protein KK1_036824, partial [Cajanus cajan]
          Length = 212

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 22/49 (44%), Positives = 34/49 (69%)
 Frame = +2

Query: 167 SGSFIQAIQWVQLLGYTRVIIETDCKQVVDHLHTARPLLSEFGVILQQC 313
           + + ++A+Q++    Y  V +ETDCKQVVDHL+    L SE+G+I+ QC
Sbjct: 97  AAAMLEALQYLIHSPYENVCVETDCKQVVDHLNNTHVLHSEYGIIINQC 145


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