BLASTX nr result

ID: Glycyrrhiza32_contig00033321 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00033321
         (547 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004495572.1 PREDICTED: pentatricopeptide repeat-containing pr...    78   2e-13
XP_014628528.1 PREDICTED: pentatricopeptide repeat-containing pr...    74   5e-12
XP_017410977.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   4e-10
XP_014513289.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   5e-10
XP_007144015.1 hypothetical protein PHAVU_007G122000g [Phaseolus...    66   2e-09

>XP_004495572.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08610
           [Cicer arietinum] XP_004495573.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g08610
           [Cicer arietinum]
          Length = 578

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 14/83 (16%)
 Frame = +3

Query: 339 MRHTASLQNNICSFHSLIGLHGRNSQGTCISGDSSDHSSRK-------------NYPLSW 479
           MRHT S QN   SFHSL   HGRN+QG+C+ G SS+HSSRK             N    W
Sbjct: 1   MRHTTSFQNKSFSFHSLNDPHGRNNQGSCVFGTSSNHSSRKIMSSLHQNDCFSTNRCSYW 60

Query: 480 RGLQCRSLRASVLIDRVG-EVDH 545
           +GL+CRSL A++L DRV  EVDH
Sbjct: 61  KGLRCRSLYATLLNDRVDYEVDH 83


>XP_014628528.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max] KRG92629.1 hypothetical
           protein GLYMA_20G222900 [Glycine max] KRG92630.1
           hypothetical protein GLYMA_20G222900 [Glycine max]
          Length = 589

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 43/88 (48%), Positives = 50/88 (56%), Gaps = 19/88 (21%)
 Frame = +3

Query: 339 MRHTASLQNNICSFHSLIGLHGRNSQGTCISGDSS--DHSSRKN---------------- 464
           M H A+LQ+NI SFHSL GLH  N Q +CI G  S  DHS RK                 
Sbjct: 1   MGHIATLQHNIFSFHSLNGLHICNKQESCILGACSALDHSLRKKTPTLHRICFGDYFSTT 60

Query: 465 -YPLSWRGLQCRSLRASVLIDRVGEVDH 545
            Y + W+GL+CRS + SVLIDR  EVDH
Sbjct: 61  KYSIPWKGLRCRSFQRSVLIDRANEVDH 88


>XP_017410977.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08610
           [Vigna angularis] XP_017410979.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g08610
           [Vigna angularis] KOM29997.1 hypothetical protein
           LR48_Vigan845s002500 [Vigna angularis] BAT94932.1
           hypothetical protein VIGAN_08158400 [Vigna angularis
           var. angularis]
          Length = 590

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 19/88 (21%)
 Frame = +3

Query: 339 MRHTASLQNNICSFHSLIGLHGRNSQGTCISGDSS--DHSSRK----------------- 461
           M H  +LQNN  SFHSL GL G N + +CI G +S  DHSSRK                 
Sbjct: 1   MGHIGTLQNNFLSFHSLNGLLGCNKEESCIFGANSAPDHSSRKEPPTLHRLYFGDYFCST 60

Query: 462 NYPLSWRGLQCRSLRASVLIDRVGEVDH 545
            Y   W+GL+C+S   SVLIDRV EV++
Sbjct: 61  KYHFPWKGLRCKSFHGSVLIDRVVEVEN 88


>XP_014513289.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08610
           [Vigna radiata var. radiata] XP_014513290.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g08610
           [Vigna radiata var. radiata]
          Length = 590

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 19/88 (21%)
 Frame = +3

Query: 339 MRHTASLQNNICSFHSLIGLHGRNSQGTCISGDSS--DHSSRKNYPLS------------ 476
           M H  +LQNNI   HSL GL G N + +CI G +S  DHSSRK  P+             
Sbjct: 1   MGHIGTLQNNILGSHSLNGLLGCNKEESCIFGGNSALDHSSRKESPIRHRVYFGDYFCST 60

Query: 477 -----WRGLQCRSLRASVLIDRVGEVDH 545
                W+GL+C+S   SVLIDRV EVD+
Sbjct: 61  KYHFPWKGLRCKSFHGSVLIDRVVEVDN 88


>XP_007144015.1 hypothetical protein PHAVU_007G122000g [Phaseolus vulgaris]
           ESW16009.1 hypothetical protein PHAVU_007G122000g
           [Phaseolus vulgaris]
          Length = 589

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 19/88 (21%)
 Frame = +3

Query: 339 MRHTASLQNNICSFHSLIGLHGRNSQGTCISGDSSD--HSSRKN---------------- 464
           M H A+LQNN+ S HSL GL G N + +CI   SS   HSSRK                 
Sbjct: 1   MGHIATLQNNVFSSHSLNGLLGCNKEESCILCASSALVHSSRKKPPTLHRIYFGDYFCST 60

Query: 465 -YPLSWRGLQCRSLRASVLIDRVGEVDH 545
            Y   W+GL+CRS + SVLIDRV E DH
Sbjct: 61  KYSFPWKGLRCRSFQGSVLIDRVIEADH 88


Top