BLASTX nr result

ID: Glycyrrhiza32_contig00032603 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00032603
         (209 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004491510.1 PREDICTED: putative pentatricopeptide repeat-cont...    58   4e-08
XP_003617808.1 pentatricopeptide (PPR) repeat protein [Medicago ...    54   7e-07

>XP_004491510.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial [Cicer arietinum]
          Length = 813

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 31/44 (70%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +2

Query: 80  HIHHQPSSTCLGGAYALDSHSYAHMLQQTIRNG-DPNAGKRVHC 208
           HI HQ    CL    ALDSHSYAHMLQQ IRNG DPNAGK++HC
Sbjct: 22  HIQHQ-HQPCL---VALDSHSYAHMLQQIIRNGADPNAGKQLHC 61


>XP_003617808.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
           AET00767.1 pentatricopeptide (PPR) repeat protein
           [Medicago truncatula]
          Length = 811

 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 30/44 (68%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
 Frame = +2

Query: 80  HIHHQPSSTCLGGAYALDSHSYAHMLQQTIRNG-DPNAGKRVHC 208
           +IHHQ    CL    ALDSHSYAHMLQQ IRNG DP AGK +HC
Sbjct: 22  NIHHQQ---CLS---ALDSHSYAHMLQQIIRNGADPIAGKHLHC 59


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