BLASTX nr result
ID: Glycyrrhiza32_contig00032298
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00032298
(203 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KIU54340.1 conjugal transfer protein TraG, partial [Bradyrhizobi... 82 1e-16
WP_011505126.1 conjugal transfer protein TraG [Nitrobacter hambu... 74 5e-14
WP_012564827.1 conjugal transfer protein TraG [Oligotropha carbo... 74 5e-14
OCX32506.1 conjugal transfer protein TraG [Bradyrhizobium sp. UA... 72 3e-13
WP_043854997.1 conjugal transfer protein TraG [Bradyrhizobium el... 72 4e-13
WP_044407308.1 MULTISPECIES: conjugal transfer protein TraG [Bra... 71 7e-13
WP_006023726.1 MULTISPECIES: hypothetical protein [Afipia] EKS33... 69 4e-12
WP_034462687.1 conjugal transfer protein TraG [Afipia sp. P52-10... 69 4e-12
SDR63788.1 type IV secretion system protein VirD4 [Rhizobiales b... 69 4e-12
BAV52653.1 TRAG protein (plasmid) [Mesorhizobium loti] 69 6e-12
WP_038357820.1 conjugal transfer protein TraG [Bosea sp. UNC402C... 65 1e-10
SCB50240.1 type IV secretion system protein VirD4 [Rhizobium mul... 63 5e-10
WP_040427721.1 conjugal transfer protein TraG [Afipia birgiae] 63 5e-10
WP_069694317.1 conjugal transfer protein TraG [Bosea vaviloviae]... 62 2e-09
WP_061979851.1 MULTISPECIES: conjugal transfer protein TraG [Bra... 60 8e-09
WP_066719726.1 MULTISPECIES: conjugal transfer protein TraG [Rhi... 59 2e-08
WP_043854869.1 hypothetical protein [Bradyrhizobium elkanii] KIU... 51 2e-06
>KIU54340.1 conjugal transfer protein TraG, partial [Bradyrhizobium elkanii]
Length = 419
Score = 81.6 bits (200), Expect = 1e-16
Identities = 39/51 (76%), Positives = 39/51 (76%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
MARVVAYRIG WSMAYEIVVALRWAPGRFPGEGASRWGLF
Sbjct: 1 MARVVAYRIGIAILLLLAFCLLWSMAYEIVVALRWAPGRFPGEGASRWGLF 51
>WP_011505126.1 conjugal transfer protein TraG [Nitrobacter hamburgensis]
ABE65020.1 TRAG protein (plasmid) [Nitrobacter
hamburgensis X14]
Length = 714
Score = 74.3 bits (181), Expect = 5e-14
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
MARVVAYRIG WSMAYE+VVALRWAP RFP EGASRW LF
Sbjct: 1 MARVVAYRIGIAVLLLLAFWLLWSMAYEVVVALRWAPSRFPSEGASRWALF 51
>WP_012564827.1 conjugal transfer protein TraG [Oligotropha carboxidovorans]
ACI94803.1 trag protein [Oligotropha carboxidovorans
OM5] AEI04678.1 type IV secretion protein VirD4
(plasmid) [Oligotropha carboxidovorans OM4] AEI08307.1
type IV secretion protein VirD4 (plasmid) [Oligotropha
carboxidovorans OM5]
Length = 718
Score = 74.3 bits (181), Expect = 5e-14
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
MARVVAYRIG WSMAYEIVVALRWAPGRFP EG +RW LF
Sbjct: 1 MARVVAYRIGVAILLLLAFWLLWSMAYEIVVALRWAPGRFPSEGTTRWALF 51
>OCX32506.1 conjugal transfer protein TraG [Bradyrhizobium sp. UASWS1016]
Length = 713
Score = 72.4 bits (176), Expect = 3e-13
Identities = 33/51 (64%), Positives = 36/51 (70%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
MARVVAY++G WSMAYE+VVALRWAP RFP EGASRW LF
Sbjct: 1 MARVVAYKLGIAILTLLAFWLLWSMAYEVVVALRWAPARFPSEGASRWALF 51
>WP_043854997.1 conjugal transfer protein TraG [Bradyrhizobium elkanii] KIU53307.1
conjugal transfer protein TraG [Bradyrhizobium elkanii]
OJV00524.1 conjugal transfer protein TraG [Nitrobacter
sp. 62-23]
Length = 721
Score = 72.0 bits (175), Expect = 4e-13
Identities = 34/51 (66%), Positives = 35/51 (68%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
MARVVAYRIG WSMAYE+VVALRWAP RFP EG SRW LF
Sbjct: 1 MARVVAYRIGIAILLLLGFWLLWSMAYEVVVALRWAPTRFPSEGTSRWALF 51
>WP_044407308.1 MULTISPECIES: conjugal transfer protein TraG [Bradyrhizobiaceae]
KIZ46688.1 conjugal transfer protein TraG
[Rhodopseudomonas palustris] KQW18072.1 conjugal
transfer protein TraG [Afipia sp. Root123D2]
Length = 716
Score = 71.2 bits (173), Expect = 7e-13
Identities = 34/51 (66%), Positives = 35/51 (68%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
MARVVAYRIG WSMAYE+VVA RWAP RFP EGASRW LF
Sbjct: 1 MARVVAYRIGIAILLLLAFWLLWSMAYEVVVAQRWAPTRFPSEGASRWALF 51
>WP_006023726.1 MULTISPECIES: hypothetical protein [Afipia] EKS33006.1 hypothetical
protein HMPREF9695_05021 [Afipia broomeae ATCC 49717]
CEG10519.1 Conjugal transfer protein TraG [Afipia felis]
Length = 712
Score = 68.9 bits (167), Expect = 4e-12
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
M+R++A+RIG WS+AYE+VVALRWAP RFP EGASRW LF
Sbjct: 1 MSRIIAFRIGIGLLVLLAFCLLWSLAYEVVVALRWAPHRFPSEGASRWALF 51
>WP_034462687.1 conjugal transfer protein TraG [Afipia sp. P52-10] ETR79437.1
conjugal transfer protein TraG [Afipia sp. P52-10]
Length = 713
Score = 68.9 bits (167), Expect = 4e-12
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
M+R++A+RIG WS+AYE+VVALRWAP RFP EGASRW LF
Sbjct: 1 MSRIIAFRIGVGLLVLLAFLLLWSLAYEVVVALRWAPQRFPSEGASRWALF 51
>SDR63788.1 type IV secretion system protein VirD4 [Rhizobiales bacterium
GAS113]
Length = 729
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/50 (66%), Positives = 34/50 (68%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGL 198
MARVVAYRIG WS+AYEIVVA RWAP RFP EGASRW L
Sbjct: 1 MARVVAYRIGIAVFALIAFFLVWSLAYEIVVAWRWAPARFPSEGASRWAL 50
>BAV52653.1 TRAG protein (plasmid) [Mesorhizobium loti]
Length = 713
Score = 68.6 bits (166), Expect = 6e-12
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGL 198
MARVVA+RIG WS+AYEIVVALRWAP RFP EGA+RW L
Sbjct: 1 MARVVAFRIGVALLALIGFWLLWSLAYEIVVALRWAPARFPSEGATRWAL 50
>WP_038357820.1 conjugal transfer protein TraG [Bosea sp. UNC402CLCol]
Length = 715
Score = 64.7 bits (156), Expect = 1e-10
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGL 198
MAR+VAYRI WS+AYE++V LRWAP RFP EGA RW L
Sbjct: 1 MARIVAYRISVAVLALIAFWLLWSLAYEVIVGLRWAPSRFPAEGAQRWAL 50
>SCB50240.1 type IV secretion system protein VirD4 [Rhizobium multihospitium]
Length = 718
Score = 63.2 bits (152), Expect = 5e-10
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGL 198
M RVVA+R+ WS+AYE+VV LRWAP RFP EGASRW L
Sbjct: 1 MTRVVAFRLAIALIGVVAFWLLWSLAYEVVVGLRWAPARFPSEGASRWAL 50
>WP_040427721.1 conjugal transfer protein TraG [Afipia birgiae]
Length = 723
Score = 63.2 bits (152), Expect = 5e-10
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGL 198
MARV A+RIG WS+AYEI V LRWAP RFP EGA+RW L
Sbjct: 1 MARVTAFRIGVAIICAVAFWLLWSLAYEIAVGLRWAPTRFPSEGATRWAL 50
>WP_069694317.1 conjugal transfer protein TraG [Bosea vaviloviae] AOO85134.1
conjugal transfer protein TraG (plasmid) [Bosea
vaviloviae]
Length = 710
Score = 61.6 bits (148), Expect = 2e-09
Identities = 29/51 (56%), Positives = 31/51 (60%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
M RV YR G WS+AYEIVVA RWAP RFP EGA+RW LF
Sbjct: 1 MLRVHLYRAGIVLFGILAFFLLWSLAYEIVVAWRWAPSRFPSEGANRWALF 51
>WP_061979851.1 MULTISPECIES: conjugal transfer protein TraG [Bradyrhizobium]
Length = 726
Score = 59.7 bits (143), Expect = 8e-09
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGL 198
MAR+V +R+G WS+AYEI V RWAP RFP EGA+RW L
Sbjct: 1 MARIVVFRLGVALICAVAFCLLWSLAYEIAVGWRWAPTRFPSEGATRWAL 50
>WP_066719726.1 MULTISPECIES: conjugal transfer protein TraG [Rhizobiales]
Length = 720
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/51 (52%), Positives = 30/51 (58%)
Frame = +1
Query: 49 MARVVAYRIGXXXXXXXXXXXXWSMAYEIVVALRWAPGRFPGEGASRWGLF 201
M RV YR G WS+AYE+VVA RWAP +FP EGA RW LF
Sbjct: 1 MLRVHLYRAGIVAFALLAFFLLWSLAYELVVAWRWAPTKFPSEGADRWALF 51
>WP_043854869.1 hypothetical protein [Bradyrhizobium elkanii] KIU54341.1
hypothetical protein QU41_00400 [Bradyrhizobium elkanii]
Length = 115
Score = 50.8 bits (120), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 3 RMAEWREQRTGGKGRHGARRRV 68
RMAEWREQRTGGKGRHGARRRV
Sbjct: 94 RMAEWREQRTGGKGRHGARRRV 115