BLASTX nr result

ID: Glycyrrhiza32_contig00032212 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00032212
         (201 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013448203.1 RNA polymerase II, Rpb4, core protein [Medicago t...    59   2e-09
AFK42923.1 unknown [Medicago truncatula]                               59   3e-09
XP_013452147.1 RNA polymerase II, Rpb4, core protein [Medicago t...    58   7e-09
XP_019442045.1 PREDICTED: uncharacterized protein LOC109346746 [...    52   1e-06
KRG97927.1 hypothetical protein GLYMA_18G039600, partial [Glycin...    52   1e-06
XP_003552972.1 PREDICTED: DNA-directed RNA polymerase III subuni...    52   1e-06
OIW12567.1 hypothetical protein TanjilG_04731 [Lupinus angustifo...    52   3e-06
KRH30952.1 hypothetical protein GLYMA_11G217000 [Glycine max]          51   4e-06
NP_001238744.1 uncharacterized protein LOC100526847 [Glycine max...    51   4e-06
KHN17941.1 DNA-directed RNA polymerase III subunit RPC9 [Glycine...    51   6e-06

>XP_013448203.1 RNA polymerase II, Rpb4, core protein [Medicago truncatula]
           KEH22230.1 RNA polymerase II, Rpb4, core protein
           [Medicago truncatula]
          Length = 159

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = +1

Query: 1   LPPPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGEEQMDTS 135
           LP PPDK  PEEIT GDEET   KH   +EIS+D+TE  EQMDTS
Sbjct: 118 LPAPPDKATPEEITKGDEETETQKH---DEISQDQTEDGEQMDTS 159


>AFK42923.1 unknown [Medicago truncatula]
          Length = 170

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = +1

Query: 1   LPPPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGEEQMDTS 135
           LP PPDK  PEEIT GDEET   KH   +EIS+D+TE  EQMDTS
Sbjct: 129 LPAPPDKATPEEITKGDEETETQKH---DEISQDQTEDGEQMDTS 170


>XP_013452147.1 RNA polymerase II, Rpb4, core protein [Medicago truncatula]
           KEH26175.1 RNA polymerase II, Rpb4, core protein
           [Medicago truncatula]
          Length = 149

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 30/45 (66%), Positives = 32/45 (71%)
 Frame = +1

Query: 1   LPPPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGEEQMDTS 135
           LP PPDK  PEEIT GDEET   KH   +EIS D+TE  EQMDTS
Sbjct: 108 LPAPPDKATPEEITKGDEETETQKH---DEISYDQTEDGEQMDTS 149


>XP_019442045.1 PREDICTED: uncharacterized protein LOC109346746 [Lupinus
           angustifolius]
          Length = 166

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/49 (63%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
 Frame = +1

Query: 1   LPPPPDKTMPEEITNGDEETA---KLKHGKGNEIS-EDKTEGEEQMDTS 135
           LPPPP KT  EEIT G+EET    K +  KGNE S ED+ EG EQMDTS
Sbjct: 118 LPPPPAKTEAEEITEGNEETTEHQKEEITKGNEESAEDQNEGGEQMDTS 166


>KRG97927.1 hypothetical protein GLYMA_18G039600, partial [Glycine max]
          Length = 158

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +1

Query: 7   PPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGEEQMDTS 135
           P P     EEIT  DEETA LK+ KGN+IS+D++EG EQM+TS
Sbjct: 116 PLPLNMKQEEITKVDEETATLKNEKGNQISQDQSEGGEQMNTS 158


>XP_003552972.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Glycine max]
          Length = 161

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +1

Query: 7   PPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGEEQMDTS 135
           P P     EEIT  DEETA LK+ KGN+IS+D++EG EQM+TS
Sbjct: 119 PLPLNMKQEEITKVDEETATLKNEKGNQISQDQSEGGEQMNTS 161


>OIW12567.1 hypothetical protein TanjilG_04731 [Lupinus angustifolius]
          Length = 573

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 31/49 (63%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
 Frame = +1

Query: 1   LPPPPDKTMPEEITNGDEETA---KLKHGKGNEIS-EDKTEGEEQMDTS 135
           LPPPP KT  EEIT G+EET    K +  KGNE S ED+ EG EQMDTS
Sbjct: 525 LPPPPAKTEAEEITEGNEETTEHQKEEITKGNEESAEDQNEGGEQMDTS 573


>KRH30952.1 hypothetical protein GLYMA_11G217000 [Glycine max]
          Length = 161

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +1

Query: 7   PPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGEEQMDTS 135
           P P     EEIT GDEETA LK+ KGN+I +D+ E  E+MDTS
Sbjct: 119 PLPLNMKKEEITKGDEETATLKNEKGNKIRQDQNEDGEEMDTS 161


>NP_001238744.1 uncharacterized protein LOC100526847 [Glycine max] ACU15853.1
           unknown [Glycine max]
          Length = 161

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +1

Query: 7   PPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGEEQMDTS 135
           P P     EEIT GDEETA LK+ KGN+I +D+ E  E+MDTS
Sbjct: 119 PLPLNMKKEEITKGDEETATLKNEKGNKIRQDQNEDGEEMDTS 161


>KHN17941.1 DNA-directed RNA polymerase III subunit RPC9 [Glycine soja]
          Length = 198

 Score = 50.8 bits (120), Expect = 6e-06
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +1

Query: 7   PPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGEEQMDTS 135
           P P     EEIT GDEETA LK+ KGN+I +D+ E  E+MDTS
Sbjct: 156 PLPLNMKKEEITKGDEETATLKNEKGNKIRQDQNEDGEEMDTS 198


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