BLASTX nr result
ID: Glycyrrhiza32_contig00031641
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00031641
(298 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_068729.1 putative reverse transcriptase [Soybean chlorotic mo... 122 2e-30
AFK73387.1 reverse transcriptase, partial [Blueberry red ringspo... 113 5e-29
AEQ49589.1 reverse transcriptase [Blueberry red ringspot virus] 116 2e-28
AEH95573.1 reverse transcriptase [Blueberry red ringspot virus] 116 2e-28
AEE01492.1 reverse transcriptase [Blueberry red ringspot virus] 116 2e-28
NP_395469.1 putative reverse transcriptase [Blueberry red ringsp... 116 3e-28
AEQ38577.1 reverse transcriptase [Blueberry red ringspot virus] 116 3e-28
CCG14716.1 ORF V protein [Strawberry vein banding virus] 115 6e-28
ALF37644.1 putative reverse transcriptase [Strawberry vein bandi... 115 6e-28
AKB94071.1 ORF V protein [Strawberry vein banding virus] 115 6e-28
YP_009254008.1 putative aspartic protease [Water chestnut soymov... 114 1e-27
NP_043933.1 hypothetical protein [Strawberry vein banding virus]... 112 1e-26
ADD11018.1 reverse transcriptase, partial [Cauliflower mosaic vi... 103 3e-25
ADD11015.1 reverse transcriptase, partial [Cauliflower mosaic vi... 103 3e-25
ADD11021.1 reverse transcriptase, partial [Cauliflower mosaic vi... 102 4e-25
YP_006907834.1 polyprotein [Horseradish latent virus] AAW56089.1... 105 2e-24
NP_042513.1 reverse transcriptase [Peanut chlorotic streak virus... 104 4e-24
ABX80502.1 RdRp, partial [Cauliflower mosaic virus] 103 5e-24
ABX80501.1 RdRp, partial [Cauliflower mosaic virus] 103 5e-24
ABX80500.1 RdRp, partial [Cauliflower mosaic virus] 102 9e-24
>NP_068729.1 putative reverse transcriptase [Soybean chlorotic mottle virus]
P15629.2 RecName: Full=Enzymatic polyprotein; Includes:
RecName: Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase CAC16945.1 putative reverse transcriptase
[Soybean chlorotic mottle virus]
Length = 692
Score = 122 bits (306), Expect = 2e-30
Identities = 61/96 (63%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Frame = -3
Query: 287 NKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFY 111
NKN L+E++LKDP++EI I YT +D EF E+ + + +KGL+R S+S HSAPAFY
Sbjct: 186 NKNGLLIEIRLKDPLQEINVTNRIPYTIRDVQEFKEECEDLLKKGLIRESQSPHSAPAFY 245
Query: 110 VENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
VENHNEIKRGKRRMVINYK+MN+A GD+Y LPRKD
Sbjct: 246 VENHNEIKRGKRRMVINYKKMNEATIGDSYKLPRKD 281
>AFK73387.1 reverse transcriptase, partial [Blueberry red ringspot virus]
Length = 255
Score = 113 bits (283), Expect = 5e-29
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Frame = -3
Query: 287 NKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFY 111
NKN EL+E+KLKDP EI I YT++D +EF ED++ + K L+RPSKS HSAPAFY
Sbjct: 46 NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKELIRPSKSPHSAPAFY 105
Query: 110 VENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
VENH+EIKR KRR+VINYK MN+A G LPR D
Sbjct: 106 VENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSD 141
>AEQ49589.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 657
Score = 116 bits (291), Expect = 2e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 287 NKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFY 111
NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS HSAPAFY
Sbjct: 172 NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFY 231
Query: 110 VENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
VENH+EIKR KRR+VINYK MN+A G LPR D
Sbjct: 232 VENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSD 267
>AEH95573.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 667
Score = 116 bits (291), Expect = 2e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 287 NKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFY 111
NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS HSAPAFY
Sbjct: 182 NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFY 241
Query: 110 VENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
VENH+EIKR KRR+VINYK MN+A G LPR D
Sbjct: 242 VENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSD 277
>AEE01492.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 680
Score = 116 bits (291), Expect = 2e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 287 NKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFY 111
NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS HSAPAFY
Sbjct: 195 NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLLNKGLIRPSKSPHSAPAFY 254
Query: 110 VENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
VENH+EIKR KRR+VINYK MN+A G LPR D
Sbjct: 255 VENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSD 290
>NP_395469.1 putative reverse transcriptase [Blueberry red ringspot virus]
AAL13274.1 putative reverse transcriptase [Blueberry red
ringspot virus]
Length = 657
Score = 116 bits (290), Expect = 3e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 287 NKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFY 111
NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS HSAPAFY
Sbjct: 172 NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFY 231
Query: 110 VENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
VENH+EIKR KRR+VINYK MN+A G LPR D
Sbjct: 232 VENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRAD 267
>AEQ38577.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 657
Score = 116 bits (290), Expect = 3e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 287 NKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFY 111
NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS HSAPAFY
Sbjct: 172 NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFY 231
Query: 110 VENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
VENH+EIKR KRR+VINYK MN+A G LPR D
Sbjct: 232 VENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRAD 267
>CCG14716.1 ORF V protein [Strawberry vein banding virus]
Length = 699
Score = 115 bits (288), Expect = 6e-28
Identities = 55/98 (56%), Positives = 71/98 (72%)
Frame = -3
Query: 296 KINNKNIELVELKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPA 117
+IN E ++ L DP K IKCKPM Y+ QDR+EF I+++ + G++RPSKS HS+PA
Sbjct: 251 RINKGKFE-AQITLLDPNKVIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKSPHSSPA 309
Query: 116 FYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
F V NH EIKRGK RMVINYK++ND +GD Y LP K+
Sbjct: 310 FMVRNHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKE 347
>ALF37644.1 putative reverse transcriptase [Strawberry vein banding virus]
Length = 704
Score = 115 bits (288), Expect = 6e-28
Identities = 55/98 (56%), Positives = 71/98 (72%)
Frame = -3
Query: 296 KINNKNIELVELKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPA 117
+IN E ++ L DP K IKCKPM Y+ QDR+EF I+++ + G++RPSKS HS+PA
Sbjct: 256 RINKGKFE-AQITLLDPNKVIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKSPHSSPA 314
Query: 116 FYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
F V NH EIKRGK RMVINYK++ND +GD Y LP K+
Sbjct: 315 FMVRNHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKE 352
>AKB94071.1 ORF V protein [Strawberry vein banding virus]
Length = 704
Score = 115 bits (288), Expect = 6e-28
Identities = 55/98 (56%), Positives = 71/98 (72%)
Frame = -3
Query: 296 KINNKNIELVELKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPA 117
+IN E ++ L DP K IKCKPM Y+ QDR+EF I+++ + G++RPSKS HS+PA
Sbjct: 256 RINKGKFE-AQITLLDPNKVIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKSPHSSPA 314
Query: 116 FYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
F V NH EIKRGK RMVINYK++ND +GD Y LP K+
Sbjct: 315 FMVRNHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKE 352
>YP_009254008.1 putative aspartic protease [Water chestnut soymovirus 1] AND65752.1
putative aspartic protease [Water chestnut soymovirus 1]
Length = 680
Score = 114 bits (286), Expect = 1e-27
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = -3
Query: 293 INNKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPA 117
+ N N ELVE+KLKDP +E+ I YT+QD EFVE+ M EKG++ + S HSAPA
Sbjct: 176 VKNTNSELVEIKLKDPKQEVNVVNRIPYTEQDVLEFVEETSMMLEKGIIEIANSPHSAPA 235
Query: 116 FYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
FYV NH E KRGKRRMVINYK MN+A G+AY LPR+D
Sbjct: 236 FYVNNHAEQKRGKRRMVINYKAMNNATVGEAYKLPRQD 273
>NP_043933.1 hypothetical protein [Strawberry vein banding virus] CAA65970.1 ORF
V [Strawberry vein banding virus]
Length = 708
Score = 112 bits (279), Expect = 1e-26
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = -3
Query: 296 KINNKNIELVELKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPA 117
+IN E ++ L D K IKCKPM Y+ QDR+EF I+++ + G++RPSKS HS+PA
Sbjct: 260 RINKGKFE-AQIALLDTNKIIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKSPHSSPA 318
Query: 116 FYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKD 3
F V NH EIKRGK RMVINYK++ND +GD Y LP K+
Sbjct: 319 FMVRNHAEIKRGKARMVINYKKLNDHTKGDGYLLPNKE 356
>ADD11018.1 reverse transcriptase, partial [Cauliflower mosaic virus]
Length = 231
Score = 103 bits (256), Expect = 3e-25
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = -3
Query: 263 LKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEIKR 84
+KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H APAF V N E +R
Sbjct: 140 IKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRR 199
Query: 83 GKRRMVINYKQMNDAMEGDAYFLPRKD 3
GK+RMV+NYK MN A GDAY LP KD
Sbjct: 200 GKKRMVVNYKAMNKATVGDAYNLPNKD 226
>ADD11015.1 reverse transcriptase, partial [Cauliflower mosaic virus]
ADD11016.1 reverse transcriptase, partial [Cauliflower
mosaic virus] ADD11017.1 reverse transcriptase, partial
[Cauliflower mosaic virus] ADD11019.1 reverse
transcriptase, partial [Cauliflower mosaic virus]
ADD11020.1 reverse transcriptase, partial [Cauliflower
mosaic virus]
Length = 231
Score = 103 bits (256), Expect = 3e-25
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = -3
Query: 263 LKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEIKR 84
+KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H APAF V N E +R
Sbjct: 140 IKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRR 199
Query: 83 GKRRMVINYKQMNDAMEGDAYFLPRKD 3
GK+RMV+NYK MN A GDAY LP KD
Sbjct: 200 GKKRMVVNYKAMNKATVGDAYNLPNKD 226
>ADD11021.1 reverse transcriptase, partial [Cauliflower mosaic virus]
Length = 231
Score = 102 bits (255), Expect = 4e-25
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = -3
Query: 263 LKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEIKR 84
+KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H APAF V N E +R
Sbjct: 140 IKLSDPNKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRR 199
Query: 83 GKRRMVINYKQMNDAMEGDAYFLPRKD 3
GK+RMV+NYK MN A GDAY LP KD
Sbjct: 200 GKKRMVVNYKAMNKATVGDAYNLPNKD 226
>YP_006907834.1 polyprotein [Horseradish latent virus] AAW56089.1 polyprotein
[Horseradish latent virus]
Length = 679
Score = 105 bits (263), Expect = 2e-24
Identities = 50/87 (57%), Positives = 63/87 (72%)
Frame = -3
Query: 263 LKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEIKR 84
+KL DP K IK KPM Y+ DR+EF + I+++ + ++RPSKS H APAF V N E +R
Sbjct: 238 IKLSDPTKVIKVKPMKYSPMDREEFEKQIQELLDLKVIRPSKSPHMAPAFLVNNEAEKRR 297
Query: 83 GKRRMVINYKQMNDAMEGDAYFLPRKD 3
GK+RMV+NYK MNDA GDAY LP KD
Sbjct: 298 GKKRMVVNYKAMNDATVGDAYNLPNKD 324
>NP_042513.1 reverse transcriptase [Peanut chlorotic streak virus] AAA50240.1
reverse transcriptase [Peanut chlorotic streak virus]
Length = 694
Score = 104 bits (260), Expect = 4e-24
Identities = 56/94 (59%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = -3
Query: 287 NKNIELVELKLKDPIKEIKCKPMI-YTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFY 111
N+N +V + L DP KE+ I YT++D DEF E+ + E G++R SKS HSAPAFY
Sbjct: 174 NRNQIIVHIDLIDPTKEVNVPNRIPYTQKDIDEFREETSKQIELGILRQSKSPHSAPAFY 233
Query: 110 VENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPR 9
VENHNEIKRGKRR+VINYK MN A +GDAY L R
Sbjct: 234 VENHNEIKRGKRRLVINYK-MNKATKGDAYNLDR 266
>ABX80502.1 RdRp, partial [Cauliflower mosaic virus]
Length = 401
Score = 103 bits (256), Expect = 5e-24
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = -3
Query: 263 LKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEIKR 84
+KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H APAF V N E +R
Sbjct: 191 IKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRR 250
Query: 83 GKRRMVINYKQMNDAMEGDAYFLPRKD 3
GK+RMV+NYK MN A GDAY LP KD
Sbjct: 251 GKKRMVVNYKAMNKATVGDAYNLPNKD 277
>ABX80501.1 RdRp, partial [Cauliflower mosaic virus]
Length = 401
Score = 103 bits (256), Expect = 5e-24
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = -3
Query: 263 LKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEIKR 84
+KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H APAF V N E +R
Sbjct: 191 IKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRR 250
Query: 83 GKRRMVINYKQMNDAMEGDAYFLPRKD 3
GK+RMV+NYK MN A GDAY LP KD
Sbjct: 251 GKKRMVVNYKAMNKATVGDAYNLPNKD 277
>ABX80500.1 RdRp, partial [Cauliflower mosaic virus]
Length = 401
Score = 102 bits (254), Expect = 9e-24
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = -3
Query: 263 LKLKDPIKEIKCKPMIYTKQDRDEFVEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEIKR 84
+KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H APAF V N E +R
Sbjct: 191 IKLSDPSKTIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRR 250
Query: 83 GKRRMVINYKQMNDAMEGDAYFLPRKD 3
GK+RMV+NYK MN A GDAY LP KD
Sbjct: 251 GKKRMVVNYKAMNKATIGDAYNLPSKD 277