BLASTX nr result

ID: Glycyrrhiza32_contig00031331 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00031331
         (484 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003604069.1 replication factor C subunit, putative [Medicago ...    67   8e-10

>XP_003604069.1 replication factor C subunit, putative [Medicago truncatula]
           AES74320.1 replication factor C subunit, putative
           [Medicago truncatula]
          Length = 800

 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 55/138 (39%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
 Frame = +1

Query: 34  PRMKKSVGV-NMISPTRHKFRFSKIVRRRKSSGG------NWLNKEV-VVDMTHPHHSNS 189
           P  K+SVG  +MISPTRH    S+  RRRK+SG       +W+ KEV   DMTH  H +S
Sbjct: 45  PTRKQSVGDRHMISPTRHNM--SRSARRRKNSGHWWLSSISWMKKEVDSYDMTHHTHLSS 102

Query: 190 NPSPYYKGLTDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSGY 369
           + SPYYKGLTDQ                                                
Sbjct: 103 D-SPYYKGLTDQSLAIPHEEYQEDDNNNISSSLRPILLSSSPHS---------------- 145

Query: 370 SPYYKGLTDFSLVID-SW 420
           SPYYKGLTD+SLVID SW
Sbjct: 146 SPYYKGLTDYSLVIDASW 163


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