BLASTX nr result
ID: Glycyrrhiza32_contig00030939
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00030939
(297 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU33259.1 hypothetical protein TSUD_333820 [Trifolium subterran... 79 2e-15
GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium ... 79 2e-15
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ... 71 3e-12
ABN08572.1 RNA-directed DNA polymerase; Ribonuclease H, related ... 67 3e-12
GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterran... 69 1e-11
GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterran... 68 2e-11
GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum] 68 3e-11
GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterran... 68 3e-11
GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterran... 68 4e-11
GAU35137.1 hypothetical protein TSUD_394630 [Trifolium subterran... 67 7e-11
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran... 66 1e-10
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ... 66 2e-10
ABE80156.1 Ribonuclease H [Medicago truncatula] 65 2e-10
GAU40444.1 hypothetical protein TSUD_397630 [Trifolium subterran... 64 4e-10
GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterran... 65 4e-10
GAU28886.1 hypothetical protein TSUD_293380 [Trifolium subterran... 64 6e-10
GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterran... 64 1e-09
GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum] 63 1e-09
GAU23316.1 hypothetical protein TSUD_237700 [Trifolium subterran... 62 3e-09
GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterran... 62 4e-09
>GAU33259.1 hypothetical protein TSUD_333820 [Trifolium subterraneum]
Length = 284
Score = 79.0 bits (193), Expect = 2e-15
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = -1
Query: 255 GEETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWC 76
GEET++HC+RDC +S++IW +LG + F D W + G P F+AGLW+ W
Sbjct: 19 GEETILHCLRDCPISRRIWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAGLWWNWR 78
Query: 75 ARNAKCIGGEDIPLQKILRDV 13
ARN C+G I K++ +V
Sbjct: 79 ARNICCVGNASIHSFKVVAEV 99
>GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
Length = 284
Score = 79.0 bits (193), Expect = 2e-15
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = -1
Query: 255 GEETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWC 76
GEET++HC+RDC +S++IW +LG + F D W + G P F+AGLW+ W
Sbjct: 13 GEETILHCLRDCPISRRIWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAGLWWNWR 72
Query: 75 ARNAKCIGGEDIPLQKILRDV 13
ARN C+G I K++ +V
Sbjct: 73 ARNIFCVGNASIHSFKVVAEV 93
>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 70.9 bits (172), Expect = 3e-12
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
+E++ HC+RDC SK IW +G + F D W + L GS+ F AGLW+ W +
Sbjct: 599 DESVFHCIRDCPFSKIIWHHIGFSEPYFFAVTDIEIWCKSGLIGSKAILFAAGLWWIWRS 658
Query: 72 RNAKCIGGEDIPLQKILRDV 13
RNA+C+ E + LQ++ ++
Sbjct: 659 RNARCMSEESMLLQRLAANI 678
>ABN08572.1 RNA-directed DNA polymerase; Ribonuclease H, related [Medicago
truncatula]
Length = 121
Score = 67.0 bits (162), Expect = 3e-12
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
EE ++HC+RDC + +W LG ++ F + W + +GS F+AG W+ W A
Sbjct: 14 EEFILHCIRDCPFAMNLWKTLGFINVNFFSNMNLLDWIKSHSNGSAANIFLAGFWWNWKA 73
Query: 72 RNAKCIGGEDIPLQKILRDVK 10
RN C+G + I L ++ + +
Sbjct: 74 RNIVCVGNDSIELFSVVSEAR 94
>GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterraneum]
Length = 440
Score = 68.9 bits (167), Expect = 1e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
EET+MHC+RDC K +W +G T F + + W ++ D + F+A LW+ W A
Sbjct: 172 EETIMHCLRDCEFVKHLWKTIGFTDQTFFHGDNLYAWLRKGCDSPSMFMFLAALWWIWRA 231
Query: 72 RNAKCIGGE 46
RN C+ E
Sbjct: 232 RNKLCLANE 240
>GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterraneum]
Length = 385
Score = 68.2 bits (165), Expect = 2e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
EET MHC+RDC K +W +G T F Q + + W ++ D + F+A +W+ W A
Sbjct: 261 EETTMHCLRDCEFIKHLWKTIGYTDQTFFQGDNLYAWLRKGCDSPSMFMFLAAVWWIWRA 320
Query: 72 RNAKCIGGE 46
RN C+ E
Sbjct: 321 RNKLCLANE 329
>GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum]
Length = 592
Score = 68.2 bits (165), Expect = 3e-11
Identities = 24/83 (28%), Positives = 46/83 (55%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
+E+ +HC+RDC ++ +W +G +M+F D + W + GS+ F G+W++W
Sbjct: 346 DESFLHCIRDCEFARSLWNHIGFNNMDFFSNMDVYDWLKLGATGSQTTTFSTGVWWSWRH 405
Query: 72 RNAKCIGGEDIPLQKILRDVKIM 4
RN C+ E+ L ++ ++ M
Sbjct: 406 RNLMCLNNENWSLSRLSFNIGTM 428
>GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterraneum]
Length = 1049
Score = 68.2 bits (165), Expect = 3e-11
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = -1
Query: 249 ETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCAR 70
ET +HC+RDC ++ IW ++G +++ F Q D + W + L S + F+A +W+ W AR
Sbjct: 782 ETTLHCLRDCDFAQSIWKSIGFSNLNFFQGDDPYVWIRNGLHCSSMFLFMATIWWIWRAR 841
Query: 69 NAKCIGGEDI 40
NA C+ E I
Sbjct: 842 NALCLNSESI 851
>GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterraneum]
Length = 1200
Score = 67.8 bits (164), Expect = 4e-11
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = -1
Query: 249 ETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCAR 70
ET +HC+RDC +IW ++G F Q D + W L+ + F+AG+W+ W AR
Sbjct: 988 ETTIHCLRDCDFVNRIWKSIGFLDQNFFQGVDVYAWLHNGLNSPTMMLFIAGIWWIWRAR 1047
Query: 69 NAKCIGGE 46
NA C+ E
Sbjct: 1048 NAMCLDSE 1055
>GAU35137.1 hypothetical protein TSUD_394630 [Trifolium subterraneum]
Length = 547
Score = 67.0 bits (162), Expect = 7e-11
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = -1
Query: 249 ETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCAR 70
ET +HC+RDC + IW ++G + + F Q D + W + L + F+A +W+ W AR
Sbjct: 336 ETTLHCLRDCDFVQIIWKSIGFSDLNFFQEDDSYDWLRNGLSFPSMFIFLAAVWWIWRAR 395
Query: 69 NAKCIGGEDIPL 34
NA C+ E IPL
Sbjct: 396 NALCLNSELIPL 407
>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
Length = 545
Score = 66.2 bits (160), Expect = 1e-10
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
EE+ +HC+R+C K+ W A+G F Q + W + ++DG F+A +W+ WCA
Sbjct: 277 EESTLHCLRNCEFIKRFWKAIGFLGQTFFQGDNLNDWLRNSIDGPSSFLFMAAVWWIWCA 336
Query: 72 RNAKCIGGEDI 40
RN C+ E I
Sbjct: 337 RNQLCMDNEAI 347
>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 65.9 bits (159), Expect = 2e-10
Identities = 29/78 (37%), Positives = 40/78 (51%)
Frame = -1
Query: 258 QGEETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAW 79
+ +E+ +HCVRDC S IW LG + F W + GS F+AGLW++W
Sbjct: 1023 ENDESFLHCVRDCKHSAAIWHKLGFVTAAFFSVSSVQDWIRNFSSGSRAITFLAGLWWSW 1082
Query: 78 CARNAKCIGGEDIPLQKI 25
RN C+ E PL +I
Sbjct: 1083 RHRNLMCLSNETWPLTRI 1100
>ABE80156.1 Ribonuclease H [Medicago truncatula]
Length = 438
Score = 65.5 bits (158), Expect = 2e-10
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
+ET +HCVRDC S+ IW +G T +F A W + + S F GLW+AW
Sbjct: 168 DETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAHDWFKIGMSSSLPDIFFGGLWWAWRH 227
Query: 72 RNAKCIGGEDIPLQKILRDV 13
RN C+ E + L ++ ++
Sbjct: 228 RNLMCLNNETMSLFRLCNNI 247
>GAU40444.1 hypothetical protein TSUD_397630 [Trifolium subterraneum]
Length = 275
Score = 64.3 bits (155), Expect = 4e-10
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
+ET +HCVRDC S+ IW +G F D W++ GS+ F AG+W+AW
Sbjct: 5 KETFLHCVRDCDFSRNIWHHIGFNDPTFFSFTDAREWRKVGSTGSQAYTFSAGVWWAWRH 64
Query: 72 RNAKCIGGEDIPLQKILRDVKIM 4
RN C+ + L ++ +++ M
Sbjct: 65 RNWMCLNNDSWSLNRLSFNIQSM 87
>GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterraneum]
Length = 458
Score = 64.7 bits (156), Expect = 4e-10
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
EET +HCVRDC LS+ IW LG + +F + D W + GS+ F +W+AW
Sbjct: 188 EETFLHCVRDCDLSRPIWHRLGFITPDFFSSSDAHEWLKFGSTGSQAFAFSTSVWWAWRH 247
Query: 72 RNAKCIGGEDIPLQKILRDVKIM 4
+N C+ E + ++ +++ M
Sbjct: 248 QNLMCLQNETWSINRLSFNIQSM 270
>GAU28886.1 hypothetical protein TSUD_293380 [Trifolium subterraneum]
Length = 286
Score = 63.9 bits (154), Expect = 6e-10
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSE--VPRFVAGLWYAW 79
EET +HCVRDC LS+ IW LG + +F D W + GS+ F AG+W+AW
Sbjct: 14 EETFLHCVRDCDLSRPIWHHLGFITPDFFSLSDAHEWLKFGSTGSQAFAFSFSAGVWWAW 73
Query: 78 CARNAKCIGGEDIPLQKILRDVKIM 4
RN C+ E + ++ +++ M
Sbjct: 74 RHRNLMCLQNETWSINRLSFNIQSM 98
>GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterraneum]
Length = 1075
Score = 63.5 bits (153), Expect = 1e-09
Identities = 29/83 (34%), Positives = 41/83 (49%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
EET +HCVRDC S+ IW +G F D W + GS+ F A +W+AW
Sbjct: 805 EETFLHCVRDCDFSRNIWHHIGFNDPTFFSFTDAREWLKVGSTGSQAYTFSASVWWAWRH 864
Query: 72 RNAKCIGGEDIPLQKILRDVKIM 4
RN C+ E L ++ ++ M
Sbjct: 865 RNLMCLNNESWSLNRLSFNIHSM 887
>GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]
Length = 386
Score = 63.2 bits (152), Expect = 1e-09
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = -1
Query: 249 ETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCAR 70
ET +HC+RDC IW +LG T F Q D +W + L S + F+A +W+ W R
Sbjct: 173 ETDLHCLRDCDFVYTIWKSLGFTDHNFFQEVDSSSWLRNGLSCSSMFLFMAAIWWIWRTR 232
Query: 69 NAKCIGGEDIP 37
NA C+ E +P
Sbjct: 233 NALCLDNELVP 243
>GAU23316.1 hypothetical protein TSUD_237700 [Trifolium subterraneum]
Length = 418
Score = 62.4 bits (150), Expect = 3e-09
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
EET +HCVRDC S IW +G + +F + D W + GS+ F AG+W++W
Sbjct: 175 EETFLHCVRDCDFSISIWHHIGFDNPDFFSSMDAHDWLKWGSTGSKAFIFSAGVWWSWRN 234
Query: 72 RNAKCIGGEDIPLQKILR 19
N C+ E + ++++
Sbjct: 235 HNLMCLNNETWTVDRVVK 252
>GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterraneum]
Length = 968
Score = 62.0 bits (149), Expect = 4e-09
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = -1
Query: 252 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 73
+E+ +HC+RDC S+ +W +G T+ F D + W + G++ F AG+W++W
Sbjct: 698 DESFLHCIRDCDFSRSLWHHIGFTNPNFFSNMDVYDWLKMGATGTQSLIFSAGVWWSWRH 757
Query: 72 RNAKCIGGEDIPLQKILRDVKIM 4
RN + E L ++ +++ M
Sbjct: 758 RNLMSLNNETWTLSRLSFNIRSM 780