BLASTX nr result

ID: Glycyrrhiza32_contig00029615 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00029615
         (295 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGV54524.1 splicing factor PWI domain-containing protein [Phaseo...    78   1e-14
KRH69549.1 hypothetical protein GLYMA_02G034300 [Glycine max]          59   4e-08

>AGV54524.1 splicing factor PWI domain-containing protein [Phaseolus vulgaris]
          Length = 887

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
 Frame = -2

Query: 213 VMVLMCGN-RIPLFLSHFF--CI*L*CCIYSFTVYIHS*SALIYLHRC----FLLCTGIP 55
           VM+L+CGN   PLFLSHFF     L CC   F V  HS   +I  + C    F+ CTG+P
Sbjct: 58  VMLLLCGNPAFPLFLSHFFRGIYRLKCCTDLFMVPTHS--LIICSNICAIDVFVFCTGMP 115

Query: 54  RYHPPYGTMVRPVYPPRP 1
           RY PPYGTMVRPV+PPRP
Sbjct: 116 RYPPPYGTMVRPVFPPRP 133


>KRH69549.1 hypothetical protein GLYMA_02G034300 [Glycine max]
          Length = 818

 Score = 59.3 bits (142), Expect = 4e-08
 Identities = 36/86 (41%), Positives = 40/86 (46%)
 Frame = -2

Query: 258 RLSYQLVIVGCAAISVMVLMCGNRIPLFLSHFFCI*L*CCIYSFTVYIHS*SALIYLHRC 79
           RLS+QLVIVGCAAISV++LMC                                       
Sbjct: 22  RLSFQLVIVGCAAISVVLLMC--------------------------------------- 42

Query: 78  FLLCTGIPRYHPPYGTMVRPVYPPRP 1
                GIPRY PPYGTMVRPV+P RP
Sbjct: 43  -----GIPRYPPPYGTMVRPVFPARP 63


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