BLASTX nr result
ID: Glycyrrhiza32_contig00029114
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00029114
(245 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III] 165 8e-48
KIU54042.1 replication protein C, partial [Bradyrhizobium elkanii] 162 3e-47
WP_052506845.1 replication protein C, partial [Bradyrhizobium el... 162 3e-47
WP_041358589.1 replication protein C [Methylobacterium extorquens] 145 4e-40
CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4] 145 4e-40
WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobi... 136 9e-37
EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis A... 136 1e-36
WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ... 121 1e-30
WP_048758169.1 replication protein C [Afipia felis] 117 2e-29
CEG10456.1 replication initiation protein RepC [Afipia felis] 117 2e-29
WP_013913430.1 replication protein C [Oligotropha carboxidovoran... 114 1e-28
ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5] 114 3e-28
WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobia... 100 5e-23
WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium] 94 9e-21
KTT92375.1 replication protein C, partial [Staphylococcus sciuri] 88 1e-19
WP_054207043.1 replication initiation protein RepC [Bosea vavilo... 89 3e-19
WP_047577000.1 replication initiation protein RepC [Methylobacte... 89 6e-19
WP_057193707.1 replication initiation protein RepC [Bosea sp. Ro... 88 9e-19
WP_018391520.1 hypothetical protein [Ancylobacter sp. FA202] 88 9e-19
WP_067988973.1 replication initiation protein RepC [Rhizobiales ... 88 1e-18
>WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III]
Length = 412
Score = 165 bits (417), Expect = 8e-48
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS
Sbjct: 273 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 332
Query: 182 PSAWEEARVAMGDGQASVVLS 244
PSAWEEARVAMGDGQASVVLS
Sbjct: 333 PSAWEEARVAMGDGQASVVLS 353
>KIU54042.1 replication protein C, partial [Bradyrhizobium elkanii]
Length = 349
Score = 162 bits (409), Expect = 3e-47
Identities = 79/79 (100%), Positives = 79/79 (100%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS
Sbjct: 271 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 330
Query: 182 PSAWEEARVAMGDGQASVV 238
PSAWEEARVAMGDGQASVV
Sbjct: 331 PSAWEEARVAMGDGQASVV 349
>WP_052506845.1 replication protein C, partial [Bradyrhizobium elkanii]
Length = 351
Score = 162 bits (409), Expect = 3e-47
Identities = 79/79 (100%), Positives = 79/79 (100%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS
Sbjct: 273 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 332
Query: 182 PSAWEEARVAMGDGQASVV 238
PSAWEEARVAMGDGQASVV
Sbjct: 333 PSAWEEARVAMGDGQASVV 351
>WP_041358589.1 replication protein C [Methylobacterium extorquens]
Length = 412
Score = 145 bits (365), Expect = 4e-40
Identities = 72/81 (88%), Positives = 73/81 (90%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
PAP G M D DR RVPD +PIRMVVELCPDIVDYARGGIRTPQDLIATAS VRPMLGIS
Sbjct: 271 PAPEGEAMADADRPRVPDAVPIRMVVELCPDIVDYARGGIRTPQDLIATASIVRPMLGIS 330
Query: 182 PSAWEEARVAMGDGQASVVLS 244
PSAWEEARVAMGDGQASVVLS
Sbjct: 331 PSAWEEARVAMGDGQASVVLS 351
>CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4]
Length = 414
Score = 145 bits (365), Expect = 4e-40
Identities = 72/81 (88%), Positives = 73/81 (90%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
PAP G M D DR RVPD +PIRMVVELCPDIVDYARGGIRTPQDLIATAS VRPMLGIS
Sbjct: 273 PAPEGEAMADADRPRVPDAVPIRMVVELCPDIVDYARGGIRTPQDLIATASIVRPMLGIS 332
Query: 182 PSAWEEARVAMGDGQASVVLS 244
PSAWEEARVAMGDGQASVVLS
Sbjct: 333 PSAWEEARVAMGDGQASVVLS 353
>WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobiaceae] KIZ48201.1
replication protein C [Rhodopseudomonas palustris]
KQW18215.1 replication protein C [Afipia sp. Root123D2]
Length = 410
Score = 136 bits (342), Expect = 9e-37
Identities = 67/81 (82%), Positives = 69/81 (85%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
PAPG EM DP +R IPIRMVVELCPDIVDYAR GIRTPQDLI TASTVR MLGIS
Sbjct: 271 PAPGAHEMADPSNARTASAIPIRMVVELCPDIVDYARSGIRTPQDLITTASTVRSMLGIS 330
Query: 182 PSAWEEARVAMGDGQASVVLS 244
PSAWEEAR+AMGDGQASVVLS
Sbjct: 331 PSAWEEARIAMGDGQASVVLS 351
>EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis ATCC 53690]
Length = 412
Score = 136 bits (342), Expect = 1e-36
Identities = 67/81 (82%), Positives = 69/81 (85%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
PAPG EM DP +R IPIRMVVELCPDIVDYAR GIRTPQDLI TASTVR MLGIS
Sbjct: 273 PAPGAHEMADPSNARTASAIPIRMVVELCPDIVDYARSGIRTPQDLITTASTVRSMLGIS 332
Query: 182 PSAWEEARVAMGDGQASVVLS 244
PSAWEEAR+AMGDGQASVVLS
Sbjct: 333 PSAWEEARIAMGDGQASVVLS 353
>WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ABE65103.1
replication protein C (plasmid) [Nitrobacter
hamburgensis X14]
Length = 541
Score = 121 bits (304), Expect = 1e-30
Identities = 61/81 (75%), Positives = 64/81 (79%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
P PG E D DR + IPIRMVVELCPDI+DYAR GIRT QDLI TAS VRPMLGIS
Sbjct: 400 PRPGAPETADADRPQSAGAIPIRMVVELCPDIIDYARDGIRTSQDLITTASAVRPMLGIS 459
Query: 182 PSAWEEARVAMGDGQASVVLS 244
PSAWEEA AMGDGQASVVL+
Sbjct: 460 PSAWEEACTAMGDGQASVVLA 480
>WP_048758169.1 replication protein C [Afipia felis]
Length = 410
Score = 117 bits (292), Expect = 2e-29
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
P PG E +R R IPIRMVVELCPDIVDYARGGIRT QDL++TAS VRP+LGIS
Sbjct: 271 PGPGTPETAGAERPRSAGAIPIRMVVELCPDIVDYARGGIRTSQDLVSTASNVRPILGIS 330
Query: 182 PSAWEEARVAMGDGQASVVLS 244
SAWEEA AMGDGQASVVL+
Sbjct: 331 SSAWEEACTAMGDGQASVVLA 351
>CEG10456.1 replication initiation protein RepC [Afipia felis]
Length = 412
Score = 117 bits (292), Expect = 2e-29
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = +2
Query: 2 PAPGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGIS 181
P PG E +R R IPIRMVVELCPDIVDYARGGIRT QDL++TAS VRP+LGIS
Sbjct: 273 PGPGTPETAGAERPRSAGAIPIRMVVELCPDIVDYARGGIRTSQDLVSTASNVRPILGIS 332
Query: 182 PSAWEEARVAMGDGQASVVLS 244
SAWEEA AMGDGQASVVL+
Sbjct: 333 SSAWEEACTAMGDGQASVVLA 353
>WP_013913430.1 replication protein C [Oligotropha carboxidovorans] AEI04578.1
replication protein C (plasmid) [Oligotropha
carboxidovorans OM4] AEI08207.1 replication protein C
(plasmid) [Oligotropha carboxidovorans OM5]
Length = 410
Score = 114 bits (286), Expect = 1e-28
Identities = 61/80 (76%), Positives = 66/80 (82%)
Frame = +2
Query: 5 APGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISP 184
AP G + +RS IPIRMVVE+CPDIVDYARGGIRT QDLI+TASTVRPMLGISP
Sbjct: 275 APHAG---NAERSGSAGAIPIRMVVEVCPDIVDYARGGIRTSQDLISTASTVRPMLGISP 331
Query: 185 SAWEEARVAMGDGQASVVLS 244
SAWEEA AMGDGQASVVL+
Sbjct: 332 SAWEEACNAMGDGQASVVLA 351
>ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5]
Length = 484
Score = 114 bits (286), Expect = 3e-28
Identities = 61/80 (76%), Positives = 66/80 (82%)
Frame = +2
Query: 5 APGGGEMIDPDRSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISP 184
AP G + +RS IPIRMVVE+CPDIVDYARGGIRT QDLI+TASTVRPMLGISP
Sbjct: 349 APHAG---NAERSGSAGAIPIRMVVEVCPDIVDYARGGIRTSQDLISTASTVRPMLGISP 405
Query: 185 SAWEEARVAMGDGQASVVLS 244
SAWEEA AMGDGQASVVL+
Sbjct: 406 SAWEEACNAMGDGQASVVLA 425
>WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobiaceae]
Length = 396
Score = 99.8 bits (247), Expect = 5e-23
Identities = 47/73 (64%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = +2
Query: 29 DPDRSRV-PDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISPSAWEEAR 205
+PD V PD +P+RMV+E CPDIVDYARG IR+ +DL+ TA+ VRPMLGISPSAWEEA
Sbjct: 277 EPDHHTVRPDNVPLRMVLEACPDIVDYARGEIRSYRDLLTTAAIVRPMLGISPSAWEEAG 336
Query: 206 VAMGDGQASVVLS 244
+ MG+ QA++V+S
Sbjct: 337 ITMGETQAAIVVS 349
>WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium]
Length = 399
Score = 93.6 bits (231), Expect = 9e-21
Identities = 44/75 (58%), Positives = 61/75 (81%), Gaps = 3/75 (4%)
Frame = +2
Query: 29 DPDRSRV---PDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISPSAWEE 199
DPD +R P+TIP+R+V++ CPDI+DYARG IR+ ++L+ TA+ VRP+LGISPSAWEE
Sbjct: 279 DPDHNRRTDRPETIPLRVVLDACPDIIDYARGEIRSYRELLTTAALVRPLLGISPSAWEE 338
Query: 200 ARVAMGDGQASVVLS 244
A MG+ QAS+V++
Sbjct: 339 AGQVMGEMQASIVVA 353
>KTT92375.1 replication protein C, partial [Staphylococcus sciuri]
Length = 226
Score = 87.8 bits (216), Expect = 1e-19
Identities = 38/69 (55%), Positives = 53/69 (76%)
Frame = +2
Query: 38 RSRVPDTIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISPSAWEEARVAMG 217
+ + P+TIP+R++VE CP DYA IRT +D+IATA+ +RP+LG+SPSAWE+A MG
Sbjct: 119 KPQAPNTIPVRLIVEACPHFGDYASDDIRTARDVIATATLIRPLLGVSPSAWEDACTVMG 178
Query: 218 DGQASVVLS 244
+GQAS L+
Sbjct: 179 EGQASATLA 187
>WP_054207043.1 replication initiation protein RepC [Bosea vaviloviae] KPH83185.1
replication initiation protein RepC [Bosea vaviloviae]
Length = 409
Score = 89.4 bits (220), Expect = 3e-19
Identities = 43/79 (54%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 GGGEMIDPDRSRVPD-TIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISPS 187
GGG I P+ R+P+ P+ MV++ CPD++DY+RGGI +D +ATA+ VRPMLGISPS
Sbjct: 283 GGGLEILPEPKRMPEGAFPLGMVLDACPDLLDYSRGGISNWRDFLATAAVVRPMLGISPS 342
Query: 188 AWEEARVAMGDGQASVVLS 244
AW EA MG+ QAS+V++
Sbjct: 343 AWNEATGIMGEVQASIVVA 361
>WP_047577000.1 replication initiation protein RepC [Methylobacterium sp. ZNC0032]
Length = 409
Score = 88.6 bits (218), Expect = 6e-19
Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 GGGEMIDPDRSRVPD-TIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISPS 187
G G I P R+P+ T P+ MV++ CPD++DY+RGGI +D +ATA+ VRPMLGISPS
Sbjct: 283 GAGLEIVPVPQRMPEGTFPLGMVLDACPDLIDYSRGGISNWRDFLATAAVVRPMLGISPS 342
Query: 188 AWEEARVAMGDGQASVVLS 244
AW EA MG+ QAS+V++
Sbjct: 343 AWNEATDVMGEVQASIVVA 361
>WP_057193707.1 replication initiation protein RepC [Bosea sp. Root483D1]
KRE11658.1 replication initiation protein RepC [Bosea
sp. Root483D1]
Length = 409
Score = 88.2 bits (217), Expect = 9e-19
Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 GGGEMIDPDRSRVPD-TIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISPS 187
GGG I P+ R+P+ T P+ MV++ CPD++DY+RGGI +D +AT + VRPMLGISPS
Sbjct: 283 GGGLEIVPEPKRMPEGTFPLGMVLDACPDLIDYSRGGIANWRDFLATVAVVRPMLGISPS 342
Query: 188 AWEEARVAMGDGQASVVLS 244
AWE+A M + QAS+V++
Sbjct: 343 AWEDAIGIMDEVQASIVVA 361
>WP_018391520.1 hypothetical protein [Ancylobacter sp. FA202]
Length = 409
Score = 88.2 bits (217), Expect = 9e-19
Identities = 43/79 (54%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 GGGEMIDPDRSRVPD-TIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISPS 187
G G + + R P+ P+ M+++ CPDIVDYARGGI +D +AT + VRPMLGISPS
Sbjct: 283 GAGAELKTELPRQPEGAYPLGMILDACPDIVDYARGGISNWRDFMATVAIVRPMLGISPS 342
Query: 188 AWEEARVAMGDGQASVVLS 244
AWEEA+ AMG+ QA VV++
Sbjct: 343 AWEEAQAAMGEVQADVVVA 361
>WP_067988973.1 replication initiation protein RepC [Rhizobiales bacterium
CCH10-E5]
Length = 409
Score = 87.8 bits (216), Expect = 1e-18
Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 GGGEMIDPDRSRVPD-TIPIRMVVELCPDIVDYARGGIRTPQDLIATASTVRPMLGISPS 187
G G I P+ RVPD T P+ MV++ CPD++DY++GGI +D +AT + VRPMLGISPS
Sbjct: 283 GVGLEIVPEPKRVPDGTFPLGMVLDACPDLIDYSKGGIANWRDFLATVAVVRPMLGISPS 342
Query: 188 AWEEARVAMGDGQASVVLS 244
AWEEA M + QAS+V++
Sbjct: 343 AWEEAIGVMDEVQASIVVA 361