BLASTX nr result

ID: Glycyrrhiza32_contig00029014 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00029014
         (249 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_008999568.1 hypothetical protein AT66_p10 (mitochondrion) [He...    77   1e-18
AGC78928.1 hypothetical protein (mitochondrion) [Vicia faba] AGC...    69   1e-15
AAA75457.1 ORFb, partial (mitochondrion) [Helianthus annuus]           75   5e-15
BAD66740.1 orf310 (mitochondrion) [Beta vulgaris subsp. vulgaris]      57   4e-10
NP_064062.1 orf270 gene product (mitochondrion) [Beta vulgaris s...    54   5e-09

>YP_008999568.1 hypothetical protein AT66_p10 (mitochondrion) [Helianthus annuus]
           CAA44478.1 ORF 873 (mitochondrion) [Helianthus annuus]
           CAA37614.1 unnamed protein product (mitochondrion)
           [Helianthus annuus] AHF21041.1 hypothetical protein
           (mitochondrion) [Helianthus annuus]
          Length = 291

 Score = 77.4 bits (189), Expect(2) = 1e-18
 Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
 Frame = -1

Query: 243 TSLPALESSSSG---ATFRAVIAA*NEAEIYARIRNLENRDFYNLPPLNPPGEYE 88
           TSLP LESSSS    ATFRA IAA NEAEI+ RIRNLE +D+YNLPP N PGEYE
Sbjct: 106 TSLPPLESSSSSESLATFRAEIAAENEAEIFTRIRNLETQDYYNLPPQNNPGEYE 160



 Score = 43.1 bits (100), Expect(2) = 1e-18
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -2

Query: 86  EGLVRQHFDQALNVPHFREILDMEYFE 6
           E LVR+ F+QAL+VPH+R +LD EYFE
Sbjct: 160 EVLVREEFEQALDVPHYRTVLDREYFE 186


>AGC78928.1 hypothetical protein (mitochondrion) [Vicia faba] AGC79027.1
           hypothetical protein (mitochondrion) [Vicia faba]
          Length = 177

 Score = 68.6 bits (166), Expect(2) = 1e-15
 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 3/54 (5%)
 Frame = -1

Query: 243 TSLPALESSSSG---ATFRAVIAA*NEAEIYARIRNLENRDFYNLPPLNPPGEY 91
           ++LPALESSSS    ATFR VIAA NEAEIY RIR LEN+ +YN+PP N PG+Y
Sbjct: 60  SNLPALESSSSYESLATFRNVIAAENEAEIYERIRVLENQHYYNIPPHNNPGDY 113



 Score = 41.6 bits (96), Expect(2) = 1e-15
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = -2

Query: 80  LVRQHFDQALNVPHFREILDMEYFE 6
           LVR+HFDQALNV H+ EI D EY E
Sbjct: 116 LVREHFDQALNVDHYWEIFDREYLE 140


>AAA75457.1 ORFb, partial (mitochondrion) [Helianthus annuus]
          Length = 167

 Score = 74.7 bits (182), Expect = 5e-15
 Identities = 40/55 (72%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
 Frame = -1

Query: 243 TSLPALESSSSG---ATFRAVIAA*NEAEIYARIRNLENRDFYNLPPLNPPGEYE 88
           TSLP LESSSS    ATFRA IAA NEAEI+  IRNLE +D+YNLPP N PGEYE
Sbjct: 106 TSLPPLESSSSSESLATFRAEIAAENEAEIFTPIRNLETQDYYNLPPQNNPGEYE 160


>BAD66740.1 orf310 (mitochondrion) [Beta vulgaris subsp. vulgaris]
          Length = 310

 Score = 57.4 bits (137), Expect(2) = 4e-10
 Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
 Frame = -1

Query: 234 PALESSSSG---ATFRAVIAA*NEAEIYARIRNLENRDFYNLPPLNPPGEYEG 85
           P LESSSS     T+R +IAA +EA+IY RI+ LE   +YNLPP N PGEY G
Sbjct: 126 PPLESSSSTESLGTYRNIIAAESEAQIYQRIQALEGGLYYNLPPQNEPGEYAG 178



 Score = 33.9 bits (76), Expect(2) = 4e-10
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -2

Query: 83  GLVRQHFDQALNVPHFREILDMEYFE 6
           G+VR HFDQA+ V H+  I D E F+
Sbjct: 178 GIVRAHFDQAITVDHYLLIFDKERFD 203


>NP_064062.1 orf270 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           YP_004222257.1 hypothetical protein BevumaM_p018
           (mitochondrion) [Beta vulgaris subsp. maritima]
           YP_004842064.1 hypothetical protein BemaM_p016
           (mitochondrion) [Beta macrocarpa] BAA99454.1 orf270
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14087.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17496.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBX24869.1 hypothetical protein (mitochondrion) [Beta
           macrocarpa] CBL52061.1 hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 270

 Score = 53.9 bits (128), Expect(2) = 5e-09
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
 Frame = -1

Query: 234 PALESSSSG---ATFRAVIAA*NEAEIYARIRNLENRDFYNLPPLNPPGEYEG 85
           P LESSSS     T+R +IAA +EA+IY RI+ LE   + NLPP N PGEY G
Sbjct: 86  PPLESSSSTESLGTYRNIIAAESEAQIYQRIQALEGGLYSNLPPQNEPGEYAG 138



 Score = 33.9 bits (76), Expect(2) = 5e-09
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -2

Query: 83  GLVRQHFDQALNVPHFREILDMEYFE 6
           G+VR HFDQA+ V H+  I D E F+
Sbjct: 138 GIVRAHFDQAITVDHYLLIFDKERFD 163


Top