BLASTX nr result

ID: Glycyrrhiza32_contig00028309 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00028309
         (534 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013453569.1 RNA-binding (RRM/RBD/RNP motif) family protein [M...    72   3e-12
NP_001238605.1 uncharacterized protein LOC100527350 [Glycine max...    68   4e-11
XP_016497532.1 PREDICTED: serine/arginine-rich splicing factor S...    49   5e-08
ONH97201.1 hypothetical protein PRUPE_7G175500 [Prunus persica]        54   5e-06

>XP_013453569.1 RNA-binding (RRM/RBD/RNP motif) family protein [Medicago
           truncatula] KEH27602.1 RNA-binding (RRM/RBD/RNP motif)
           family protein [Medicago truncatula]
          Length = 236

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = -2

Query: 533 RYITVERNALHQLCWQQSKMISSSMSTLVKQLDHWQA 423
           RYITVERNALHQLCWQQSKMISSSMSTLVKQLD  QA
Sbjct: 200 RYITVERNALHQLCWQQSKMISSSMSTLVKQLDQMQA 236


>NP_001238605.1 uncharacterized protein LOC100527350 [Glycine max] ACU16425.1
           unknown [Glycine max]
          Length = 174

 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 33/37 (89%), Positives = 33/37 (89%)
 Frame = -2

Query: 533 RYITVERNALHQLCWQQSKMISSSMSTLVKQLDHWQA 423
           RYITVERN LHQL WQQSKMISSSMSTLV QLD WQA
Sbjct: 138 RYITVERNTLHQLFWQQSKMISSSMSTLVIQLDQWQA 174


>XP_016497532.1 PREDICTED: serine/arginine-rich splicing factor SR45a-like isoform
           X2 [Nicotiana tabacum]
          Length = 193

 Score = 48.9 bits (115), Expect(3) = 5e-08
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -2

Query: 533 RYITVERNALHQLCWQQSKMISSSMSTL 450
           RYITVE+  L QLCWQQSKMISSS++TL
Sbjct: 126 RYITVEKKTLPQLCWQQSKMISSSLATL 153



 Score = 28.5 bits (62), Expect(3) = 5e-08
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -1

Query: 384 TNYIVQQLYNLSIHFPLS 331
           +NYI QQLYNLS +F L+
Sbjct: 176 SNYIAQQLYNLSKYFQLN 193



 Score = 26.2 bits (56), Expect(3) = 5e-08
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 442 SLIIGKLKQLIKCV*STKH 386
           SLI G LKQL  C+ S KH
Sbjct: 157 SLINGPLKQLFTCISSAKH 175


>ONH97201.1 hypothetical protein PRUPE_7G175500 [Prunus persica]
          Length = 167

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = -2

Query: 533 RYITVERNALHQLCWQQSKMISSSMSTLVKQLDHWQA 423
           RYITVER     +CWQQS+M+S SMSTLVKQLD WQA
Sbjct: 136 RYITVER-----VCWQQSQMMSLSMSTLVKQLDQWQA 167


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