BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00028041
         (472 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP59936.1 Putative ribonuclease H protein At1g65750 family [Caj...    53   5e-11
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran...    47   5e-10
KHN01269.1 Putative ribonuclease H protein [Glycine soja]              57   3e-07
KYP43130.1 Putative ribonuclease H protein At1g65750 family, par...    44   3e-06

>KYP59936.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 116

 Score = 52.8 bits (125), Expect(3) = 5e-11
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -2

Query: 417 AELWAILKGLH-ARSKGFQKIIVETDSLAAKNLILGDSSVLHPCFNLVKEI*TAYGVGG 244
           AELWAI  G+  A ++GF K++VE+DSL A  L+    S  HPCF+LV+ I +    GG
Sbjct: 2   AELWAIYIGITTAWNRGFTKLVVESDSLLAVGLLQNGCSSCHPCFSLVQSILSFVAAGG 60



 Score = 32.3 bits (72), Expect(3) = 5e-11
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -3

Query: 242 DTKLLHTLREANQVAYGFANYG 177
           D +  H LREANQVA G ANYG
Sbjct: 61  DFECRHILREANQVADGLANYG 82



 Score = 29.3 bits (64), Expect(3) = 5e-11
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 157 NCIIFDVIPSFASLVIVADGSGTFFPRGY 71
           N  +F+ +  F SLV++AD S T F RG+
Sbjct: 88  NLHVFENVMPFISLVVLADVSSTIFLRGF 116


>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
          Length = 1250

 Score = 47.0 bits (110), Expect(3) = 5e-10
 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = -2

Query: 426  LTEAELWAILKGLH-ARSKGFQKIIVETDSLAAKNLILGDSSVLHPCFNLVK 274
            +  AELW I+ GL  A++KG ++I VE+DS+ A NLI    +  HP F+LV+
Sbjct: 1133 VVHAELWGIINGLELAKNKGLKRIRVESDSMIAINLIRNGCNKEHPAFHLVQ 1184



 Score = 38.5 bits (88), Expect(3) = 5e-10
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 172  MDLDLNCIIFDVIPSFASLVIVADGSGTFFPRGY 71
            + L  NCIIFD +P F  + ++AD  G  FPRG+
Sbjct: 1217 LSLSNNCIIFDHVPGFLVMPLMADSVGIGFPRGF 1250



 Score = 25.0 bits (53), Expect(3) = 5e-10
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 263  QLMELEEDTKLLHTLREANQVAYGFANYGMN 171
            +L E  E     HT REANQVA   A + ++
Sbjct: 1188 RLTEGMESVLWQHTWREANQVADALAKFSLS 1218


>KHN01269.1 Putative ribonuclease H protein [Glycine soja]
          Length = 152

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -2

Query: 417 AELWAILKGLH-ARSKGFQKIIVETDSLAAKNLILGDSSVLHPCFNLVKEI*TAYGVGGG 241
           AELWAIL G+  A S+GF++I V++DSL A  L+ G  S   PC+NLV++I   Y   G 
Sbjct: 91  AELWAILLGIKLAWSRGFRRIRVDSDSLNAIKLLEGSCSRFRPCYNLVRDIHQGYANSGN 150

Query: 240 H 238
           H
Sbjct: 151 H 151


>KYP43130.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 176

 Score = 44.3 bits (103), Expect(3) = 3e-06
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = -2

Query: 435 FGILTEAELWAILKGLH-ARSKGFQKIIVETDSLAAKNLILGDSSVLHPCFNLVKEI*TA 259
           F  +   ELWAI  G+  A +K F K +VE+DSL A + +     + HPCF+LV+ I  +
Sbjct: 56  FYSVVNLELWAIYIGMAIAWNKAFIKFLVESDSLLAISPLRNGCPLCHPCFSLVQSI-RS 114

Query: 258 YGVGGG 241
           + V GG
Sbjct: 115 FVVAGG 120



 Score = 30.0 bits (66), Expect(3) = 3e-06
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 157 NCIIFDVIPSFASLVIVADGSGTFFPRGY 71
           N  +F+ +  F +LV+ AD S TFF RG+
Sbjct: 148 NLYVFNNVMPFFALVVQADVSSTFFSRGF 176



 Score = 23.1 bits (48), Expect(3) = 3e-06
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 242 DTKLLHTLREANQVAYGFANYG 177
           D +  H L EANQ     ANYG
Sbjct: 121 DLEWCHVLLEANQNVDKLANYG 142