BLASTX nr result

ID: Glycyrrhiza32_contig00028015 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00028015
         (490 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013461328.1 hypothetical protein MTR_3g088705 [Medicago trunc...    68   2e-12
KHN44293.1 hypothetical protein glysoja_024513 [Glycine soja]          52   4e-06
KHN46975.1 hypothetical protein glysoja_018342 [Glycine soja] KR...    51   7e-06

>XP_013461328.1 hypothetical protein MTR_3g088705 [Medicago truncatula] KEH35363.1
           hypothetical protein MTR_3g088705 [Medicago truncatula]
          Length = 67

 Score = 68.2 bits (165), Expect = 2e-12
 Identities = 29/47 (61%), Positives = 39/47 (82%)
 Frame = -3

Query: 374 SEQTEAWHKPKDGSIFPAKRRSVKRMMWDRVVDPMADKVNKKNSVFP 234
           +E+TEAWHKPK+GS+FPAK+RSVK+MMWD+ VDP  +  +  N+V P
Sbjct: 7   TEETEAWHKPKNGSVFPAKKRSVKKMMWDQFVDPKGNN-SSSNTVSP 52


>KHN44293.1 hypothetical protein glysoja_024513 [Glycine soja]
          Length = 69

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -3

Query: 398 KKTKERMVSEQTEAWHKPKDGSIFPAKRRSVKRMMWDRVVDPMADKVN---KKNSVFP 234
           KK K+   +E+TE WHKPK+GS+FP +R SVK+M++ +V   + D V    KK SV P
Sbjct: 5   KKGKD---AEETEPWHKPKNGSVFPKERVSVKQMVYKKVKQVVVDFVESTAKKGSVSP 59


>KHN46975.1 hypothetical protein glysoja_018342 [Glycine soja] KRH53323.1
           hypothetical protein GLYMA_06G118700 [Glycine max]
          Length = 69

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
 Frame = -3

Query: 419 MEGDMGGKKTKERMVSEQTEAWHKPKDGSIFPAKRRSVKRMMWDRVVDPMADKVN---KK 249
           MEG+  GK       +E+TE  HKPK+GSIFP +R SVKRMM+++    + D V    KK
Sbjct: 1   MEGEKKGKG------AEETEPCHKPKNGSIFPKERTSVKRMMYEKGKQVVVDCVKSTAKK 54

Query: 248 NSVFP 234
            SV P
Sbjct: 55  ASVSP 59


Top