BLASTX nr result
ID: Glycyrrhiza32_contig00026912
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00026912
(273 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium ... 181 3e-51
WP_063987526.1 Ti-type conjugative transfer relaxase TraA [Methy... 101 5e-23
CRY97952.1 hypothetical protein (plasmid) [uncultured prokaryote] 95 9e-21
WP_062099392.1 conjugal transfer protein TraA [Caulobacter sp. C... 83 1e-16
SFK37529.1 Ti-type conjugative transfer relaxase TraA [Sphingomo... 82 4e-16
WP_012751939.1 Ti-type conjugative transfer relaxase TraA [Methy... 82 4e-16
WP_070404341.1 Ti-type conjugative transfer relaxase TraA [Kozak... 80 9e-16
GAN95584.1 conjugal exonuclease V alpha subunit TraA [Komagataei... 78 1e-15
WP_048848536.1 conjugal transfer protein TraA, partial [Acetobac... 80 2e-15
WP_064311754.1 Ti-type conjugative transfer relaxase TraA [Sphin... 79 2e-15
WP_062446217.1 conjugal transfer protein TraA [Gluconobacter oxy... 79 3e-15
WP_061491521.1 conjugal transfer protein TraA, partial [Acetobac... 79 4e-15
WP_033965821.1 conjugal transfer protein TraA [Sphingomonas sp. ... 79 4e-15
WP_064311877.1 Ti-type conjugative transfer relaxase TraA [Sphin... 79 4e-15
KFL91347.1 hypothetical protein AmDm5_0642 [Acetobacter malorum] 78 6e-15
WP_043549975.1 conjugal transfer protein TraA [Acetobacter malorum] 78 6e-15
SAY47493.1 ATP-dependent RecD-like DNA helicase [Komagataeibacte... 78 6e-15
WP_070325624.1 Ti-type conjugative transfer relaxase TraA [Aceto... 78 8e-15
KDE19100.1 conjugal transfer protein TraA [Acetobacter aceti 1023] 77 1e-14
WP_019092373.1 Ti-type conjugative transfer relaxase TraA [Komag... 77 1e-14
>WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium extorquens]
ACS44173.1 Conjugal transfer protein TraA (plasmid)
[Methylobacterium extorquens AM1]
Length = 964
Score = 181 bits (459), Expect = 3e-51
Identities = 89/90 (98%), Positives = 90/90 (100%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRGIVPASTIV 181
AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRGIVPASTIV
Sbjct: 683 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRGIVPASTIV 742
Query: 182 VERPAEPELRPQPPAPRLGRFAGLKLGRAP 271
VERPAEPELRP+PPAPRLGRFAGLKLGRAP
Sbjct: 743 VERPAEPELRPEPPAPRLGRFAGLKLGRAP 772
>WP_063987526.1 Ti-type conjugative transfer relaxase TraA [Methylobacterium
populi] BAU94019.1 conjugal transfer relaxase TraA
(plasmid) [Methylobacterium populi] OAH27958.1 conjugal
transfer protein TraA [Methylobacterium populi]
Length = 985
Score = 101 bits (251), Expect = 5e-23
Identities = 56/88 (63%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRGIVPASTIV 181
AYVGLTRHRE V LH+ + D D L R SRERA++TTLDY AGFAERRGI P S IV
Sbjct: 684 AYVGLTRHREGVELHWAKADLNDRAGLDRALSRERAKDTTLDYGAGFAERRGIAPPSEIV 743
Query: 182 VERP-AEPELRPQPPAPRLGRFAGLKLG 262
V RP AE E APR FAGLKLG
Sbjct: 744 VPRPSAEWERALDQTAPRRSMFAGLKLG 771
>CRY97952.1 hypothetical protein (plasmid) [uncultured prokaryote]
Length = 1003
Score = 94.7 bits (234), Expect = 9e-21
Identities = 52/90 (57%), Positives = 62/90 (68%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRGIVPASTIV 181
AYVG++RHRE + +HYG DDF D L R SRERA++TTLDY FAERRG+V S I+
Sbjct: 718 AYVGMSRHRETLAVHYGADDFKDRDQLDRTLSRERAKDTTLDYGDAFAERRGLV-RSEIL 776
Query: 182 VERPAEPELRPQPPAPRLGRFAGLKLGRAP 271
VER PE+ AP+ F GLKLGRAP
Sbjct: 777 VERGPAPEV---GRAPKRSMFDGLKLGRAP 803
>WP_062099392.1 conjugal transfer protein TraA [Caulobacter sp. CCH5-E12]
Length = 984
Score = 83.2 bits (204), Expect = 1e-16
Identities = 44/90 (48%), Positives = 53/90 (58%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRGIVPASTIV 181
AYVG++RHRE + +HYG DDF D L R RERA++TTLDY FAERRG+ A +
Sbjct: 698 AYVGMSRHRETLAVHYGADDFKDRGQLTRTLGRERAKDTTLDYGVAFAERRGLDRAEILA 757
Query: 182 VERPAEPELRPQPPAPRLGRFAGLKLGRAP 271
PA R + F GLKLGR P
Sbjct: 758 ERGPAPDAAR----TVKRSMFDGLKLGRTP 783
>SFK37529.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. NFR04]
Length = 1007
Score = 81.6 bits (200), Expect = 4e-16
Identities = 47/92 (51%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDY---AAGFAERRGIVPA- 169
AYV L+RHR+AV LHYG+DDF D LAR SR+R ++ LDY A FA RRG+ +
Sbjct: 686 AYVALSRHRDAVQLHYGRDDFADQGKLARTLSRDRPKDNVLDYDTAAERFAARRGVERSR 745
Query: 170 --STIVVERPAEPELRPQPPAPRLGRFAGLKL 259
T+ E AEPE PAPR G F GL+L
Sbjct: 746 ILDTLAKEPLAEPERSAPAPAPRRGMFDGLRL 777
>WP_012751939.1 Ti-type conjugative transfer relaxase TraA [Methylobacterium
extorquens] ACS44141.1 Conjugal transfer protein traA
(plasmid) [Methylobacterium extorquens AM1]
Length = 1095
Score = 81.6 bits (200), Expect = 4e-16
Identities = 50/113 (44%), Positives = 62/113 (54%), Gaps = 27/113 (23%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRGIV------ 163
AYV +TRHR+ L+ G+D+FG+++AL SR+ A+ETTLDYAAG+AERRGI
Sbjct: 744 AYVAMTRHRDEARLYAGRDEFGNLEALTARLSRDGAKETTLDYAAGYAERRGIAERIGIR 803
Query: 164 ------------PASTIVVERPAEPELR---------PQPPAPRLGRFAGLKL 259
PA RPAEPE Q PA + G FAGLKL
Sbjct: 804 SEIALPRDRREGPAREGEGARPAEPEAARALSAEGPVAQAPAKKRGMFAGLKL 856
>WP_070404341.1 Ti-type conjugative transfer relaxase TraA [Kozakia baliensis]
AOX18916.1 conjugal transfer protein TraA (plasmid)
[Kozakia baliensis]
Length = 890
Score = 80.5 bits (197), Expect = 9e-16
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 18/104 (17%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 558 AYVALSRHRESVSVHWGRDDVGDRDGLVRRLSRERLKDTTLDYPQVRDRDAGFARRRGVH 617
Query: 161 VPASTIVVE-----------RPAEPELRPQPPAPRLGRFAGLKL 259
VP S IVVE R AE P P + G F GL L
Sbjct: 618 VPESEIVVERGKAASGPQTDRQAEAVRTPDPAQRKRGMFDGLDL 661
>GAN95584.1 conjugal exonuclease V alpha subunit TraA [Komagataeibacter
europaeus NBRC 3261]
Length = 226
Score = 77.8 bits (190), Expect = 1e-15
Identities = 53/106 (50%), Positives = 62/106 (58%), Gaps = 20/106 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 81 AYVALSRHRESVSVHWGRDDLGDRDGLVRRLSRERLKDTTLDYPQVRDRDAGFARRRGLH 140
Query: 161 VPASTIVVE-----------RPAEPELRPQP-PAPR-LGRFAGLKL 259
VP S IVVE R AE P P PA R G F GL L
Sbjct: 141 VPESEIVVERGKAASGPQKDRQAEAVRTPDPAPAQRKRGMFDGLDL 186
>WP_048848536.1 conjugal transfer protein TraA, partial [Acetobacter indonesiensis]
Length = 866
Score = 79.7 bits (195), Expect = 2e-15
Identities = 51/110 (46%), Positives = 61/110 (55%), Gaps = 20/110 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 693 AYVALSRHRESVSVHWGRDDVGDRDGLVRRLSRERLKDTTLDYPHERDRDAGFARRRGLS 752
Query: 161 VPASTIVVER-------------PAEPELRPQPPAPRLGRFAGLKLGRAP 271
VP S IVVER A L P P + G F GL L P
Sbjct: 753 VPESEIVVERGKAASGPRQDRQAEAVHTLDPAPAQQKRGMFDGLDLSVRP 802
>WP_064311754.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. TDK1]
OAN63745.1 Ti-type conjugative transfer relaxase TraA
[Sphingomonas sp. TDK1]
Length = 1007
Score = 79.3 bits (194), Expect = 2e-15
Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAG---FAERRGIVPA- 169
AYV L+RHR V LHYG+DDF D LAR SR+R ++ LDY A FA RRG+ +
Sbjct: 686 AYVALSRHRAVVHLHYGRDDFADQGKLARALSRDRPKDNALDYDAAAERFAARRGVERSR 745
Query: 170 --STIVVERPAEPELRPQPPAPRLGRFAGLKL 259
T+ E AEPE PAPR G F GL+L
Sbjct: 746 ILDTLARESLAEPERSVPAPAPRRGMFDGLRL 777
>WP_062446217.1 conjugal transfer protein TraA [Gluconobacter oxydans] KXV16681.1
conjugal transfer protein TraA [Gluconobacter oxydans]
Length = 1028
Score = 79.0 bits (193), Expect = 3e-15
Identities = 52/110 (47%), Positives = 63/110 (57%), Gaps = 20/110 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+GQDD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 693 AYVALSRHRESVSVHWGQDDVGDRDGLVRRLSRERLKDTTLDYPQVRDRDAGFARRRGLY 752
Query: 161 VPASTIVV-----------ERPAEPELRPQPPA--PRLGRFAGLKLGRAP 271
VP S IVV ER AE P+P + + G F GL L P
Sbjct: 753 VPESEIVVEREKAASGPRQERQAEGVPMPEPASAQQKRGMFDGLDLSVRP 802
>WP_061491521.1 conjugal transfer protein TraA, partial [Acetobacter malorum]
KXV74437.1 conjugal transfer protein TraA, partial
[Acetobacter malorum]
Length = 894
Score = 78.6 bits (192), Expect = 4e-15
Identities = 50/106 (47%), Positives = 63/106 (59%), Gaps = 20/106 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD+ L R SRER ++TTLDY AGFA RRG+
Sbjct: 693 AYVALSRHRESVSIHWGRDDVGDLDGLVRRLSRERLKDTTLDYPHVRDRDAGFARRRGLH 752
Query: 161 VPASTIVVE-----------RPAEPELRPQPPA--PRLGRFAGLKL 259
VP S IVVE R AE P+P + + G F GL L
Sbjct: 753 VPESEIVVEREKAASGPRQDRQAEGVPMPEPASAQQKRGMFDGLDL 798
>WP_033965821.1 conjugal transfer protein TraA [Sphingomonas sp. Ant H11]
Length = 959
Score = 78.6 bits (192), Expect = 4e-15
Identities = 47/90 (52%), Positives = 53/90 (58%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRGIVPASTIV 181
AYV L+RHRE+V LHYG DDF D LA SRERA++ DYA FA RR IV
Sbjct: 686 AYVALSRHRESVELHYGHDDFADHGKLAATLSRERAKDMASDYAPAFAARR------QIV 739
Query: 182 VERPAEPELRPQPPAPRLGRFAGLKLGRAP 271
+ PA R Q PAP+ FAGLKL P
Sbjct: 740 LPTPA----REQQPAPKRDMFAGLKLRLPP 765
>WP_064311877.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. TDK1]
OAN63539.1 Ti-type conjugative transfer relaxase TraA
[Sphingomonas sp. TDK1]
Length = 1009
Score = 78.6 bits (192), Expect = 4e-15
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAG---FAERRGIVPA- 169
AYV L+RHR+AV LHYG+DDF D LAR SR+R ++ LDY A FA RRG+ +
Sbjct: 686 AYVALSRHRDAVHLHYGRDDFADQGKLARTLSRDRPKDNALDYDAAAERFAARRGVERSR 745
Query: 170 --STIVVERPAEPELRPQPPAPRLGRFAGLKL 259
T+ E AEPE PA R G F GL+L
Sbjct: 746 ILDTLAKEPLAEPERSAPAPAQRRGMFDGLRL 777
>KFL91347.1 hypothetical protein AmDm5_0642 [Acetobacter malorum]
Length = 1009
Score = 78.2 bits (191), Expect = 6e-15
Identities = 51/110 (46%), Positives = 63/110 (57%), Gaps = 20/110 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 674 AYVALSRHRESVSVHWGRDDVGDRDGLVRRLSRERLKDTTLDYPLVRDRDAGFARRRGLS 733
Query: 161 VPASTIVVE-----------RPAEPELRPQPPA--PRLGRFAGLKLGRAP 271
VP S IVVE R AE P+P + + G F GL L P
Sbjct: 734 VPESEIVVEREKAASGPRQDRQAEAVRTPEPASAQQKRGMFDGLDLSVRP 783
>WP_043549975.1 conjugal transfer protein TraA [Acetobacter malorum]
Length = 1028
Score = 78.2 bits (191), Expect = 6e-15
Identities = 51/110 (46%), Positives = 63/110 (57%), Gaps = 20/110 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 693 AYVALSRHRESVSVHWGRDDVGDRDGLVRRLSRERLKDTTLDYPLVRDRDAGFARRRGLS 752
Query: 161 VPASTIVVE-----------RPAEPELRPQPPA--PRLGRFAGLKLGRAP 271
VP S IVVE R AE P+P + + G F GL L P
Sbjct: 753 VPESEIVVEREKAASGPRQDRQAEAVRTPEPASAQQKRGMFDGLDLSVRP 802
>SAY47493.1 ATP-dependent RecD-like DNA helicase [Komagataeibacter rhaeticus]
Length = 1125
Score = 78.2 bits (191), Expect = 6e-15
Identities = 50/106 (47%), Positives = 60/106 (56%), Gaps = 20/106 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 791 AYVALSRHRESVSVHWGRDDVGDRDGLVRRLSRERLKDTTLDYPHVRDRDAGFARRRGLH 850
Query: 161 VPASTIVVER-------------PAEPELRPQPPAPRLGRFAGLKL 259
VP S IVVER A L P P + G F GL L
Sbjct: 851 VPESEIVVERSETASGPQKDRQAEAVHTLDPAPAQRKRGMFDGLDL 896
>WP_070325624.1 Ti-type conjugative transfer relaxase TraA [Acetobacter
pasteurianus] AOW50933.1 Ti-type conjugative transfer
relaxase TraA (plasmid) [Acetobacter pasteurianus subsp.
paradoxus]
Length = 1028
Score = 77.8 bits (190), Expect = 8e-15
Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 7/70 (10%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD+ L R SRER ++TTLDY AGFA RRG+
Sbjct: 693 AYVALSRHRESVSIHWGRDDVGDLDGLVRRLSRERLKDTTLDYPHVRDRDAGFARRRGLH 752
Query: 161 VPASTIVVER 190
VP S IVVER
Sbjct: 753 VPESEIVVER 762
>KDE19100.1 conjugal transfer protein TraA [Acetobacter aceti 1023]
Length = 867
Score = 77.4 bits (189), Expect = 1e-14
Identities = 51/110 (46%), Positives = 63/110 (57%), Gaps = 20/110 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 693 AYVALSRHRESVSVHWGRDDVGDRDGLVRRLSRERLKDTTLDYPHVRDRDAGFARRRGLH 752
Query: 161 VPASTIVVER-----------PAEPELRPQPPA--PRLGRFAGLKLGRAP 271
VP S IVVER AE P+P + + G F GL L P
Sbjct: 753 VPESEIVVEREKAASGPRQDKQAEGVPMPEPASAQQKRGMFDGLDLSVRP 802
>WP_019092373.1 Ti-type conjugative transfer relaxase TraA [Komagataeibacter
europaeus]
Length = 890
Score = 77.4 bits (189), Expect = 1e-14
Identities = 53/106 (50%), Positives = 62/106 (58%), Gaps = 20/106 (18%)
Frame = +2
Query: 2 AYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYA------AGFAERRGI- 160
AYV L+RHRE+V++H+G+DD GD L R SRER ++TTLDY AGFA RRG+
Sbjct: 556 AYVALSRHRESVSVHWGRDDVGDRDGLVRRLSRERLKDTTLDYLHVRDRDAGFARRRGLH 615
Query: 161 VPASTIVVE-----------RPAEPELRPQP-PAPR-LGRFAGLKL 259
VP S IVVE R AE P P PA R G F GL L
Sbjct: 616 VPESEIVVEREKAASGPQKDRQAEAVRTPDPAPAQRKRGMFDGLDL 661