BLASTX nr result

ID: Glycyrrhiza32_contig00026569 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00026569
         (235 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU50408.1 hypothetical protein TSUD_244550 [Trifolium subterran...    56   2e-07
XP_003595510.1 replication factor-A carboxy-terminal domain prot...    53   2e-06
XP_007161871.1 hypothetical protein PHAVU_001G105000g [Phaseolus...    52   8e-06

>GAU50408.1 hypothetical protein TSUD_244550 [Trifolium subterraneum]
          Length = 340

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 25/54 (46%), Positives = 41/54 (75%)
 Frame = +3

Query: 3   KIKPFQGKHVLQTTYHCTKLIFNPQFAAA*DLRERIVAKSVSPTQGISQLQECS 164
           K+K FQG+  +Q T + TK++FNP F+AA DL++R++  + +P+ GIS+LQ+ S
Sbjct: 207 KVKIFQGRATVQNTIYSTKILFNPVFSAAVDLKKRMIENNDTPSPGISRLQDNS 260


>XP_003595510.1 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] AES65761.1 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 549

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 41/64 (64%)
 Frame = +3

Query: 3   KIKPFQGKHVLQTTYHCTKLIFNPQFAAA*DLRERIVAKSVSPTQGISQLQECSNRYHEF 182
           KIK FQG+  +Q T + TK++FNP F AA  L++R+V    SP+ GIS++ E S    E 
Sbjct: 207 KIKIFQGQATIQNTINATKVLFNPTFTAALLLKKRMVENDDSPSPGISKITEASKVSVEE 266

Query: 183 WFLS 194
            FL+
Sbjct: 267 DFLN 270


>XP_007161871.1 hypothetical protein PHAVU_001G105000g [Phaseolus vulgaris]
           ESW33865.1 hypothetical protein PHAVU_001G105000g
           [Phaseolus vulgaris]
          Length = 405

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 27/65 (41%), Positives = 41/65 (63%)
 Frame = +3

Query: 3   KIKPFQGKHVLQTTYHCTKLIFNPQFAAA*DLRERIVAKSVSPTQGISQLQECSNRYHEF 182
           K+K FQ K  LQ    CTK+I+N Q   A +L++R++  + SPTQG+SQL +   +  E 
Sbjct: 117 KVKIFQEKVCLQNCLDCTKIIYNIQSKDAIELKKRMIESTNSPTQGLSQLCDSGKQNVED 176

Query: 183 WFLSY 197
            F+S+
Sbjct: 177 EFISF 181


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