BLASTX nr result
ID: Glycyrrhiza32_contig00024819
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00024819
(214 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_056239537.1 DNA polymerase III subunit alpha [Methylobacteriu... 127 2e-32
BAU89712.1 DNA polymerase III subunit alpha [Methylobacterium po... 125 7e-32
WP_017486702.1 DNA polymerase III subunit alpha [Methylobacteriu... 125 7e-32
SFK49452.1 DNA polymerase III, alpha subunit [Methylobacterium s... 125 9e-32
WP_060768759.1 DNA polymerase III subunit alpha [Methylobacteriu... 125 9e-32
WP_012452924.1 DNA polymerase III subunit alpha [Methylobacteriu... 125 9e-32
WP_076640687.1 DNA polymerase III subunit alpha [Methylobacteriu... 124 2e-31
WP_015950000.1 DNA polymerase III subunit alpha [Methylobacteriu... 124 2e-31
WP_003600454.1 MULTISPECIES: DNA polymerase III subunit alpha [M... 124 2e-31
WP_056502601.1 DNA polymerase III subunit alpha [Methylobacteriu... 124 2e-31
WP_056458128.1 DNA polymerase III subunit alpha [Methylobacteriu... 124 2e-31
WP_015821632.1 DNA polymerase III subunit alpha [Methylobacteriu... 124 2e-31
WP_056114024.1 DNA polymerase III subunit alpha [Methylobacteriu... 124 2e-31
WP_056204965.1 DNA polymerase III subunit alpha [Methylobacteriu... 124 2e-31
WP_056154562.1 DNA polymerase III subunit alpha [Methylobacteriu... 124 2e-31
WP_056407799.1 DNA polymerase III subunit alpha [Methylobacteriu... 107 1e-25
WP_055885812.1 DNA polymerase III subunit alpha [Methylobacteriu... 107 1e-25
WP_056284206.1 DNA polymerase III subunit alpha [Methylobacteriu... 107 1e-25
WP_056254483.1 DNA polymerase III subunit alpha [Methylobacteriu... 103 5e-24
WP_056431789.1 MULTISPECIES: DNA polymerase III subunit alpha [M... 102 6e-24
>WP_056239537.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf456]
KQT61174.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf456]
Length = 1173
Score = 127 bits (318), Expect = 2e-32
Identities = 63/71 (88%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG +GPLDT LRAGR DQAARRLEVL+ AFGEERLYVE+QRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLTGPLDTCLRAGRVDQAARRLEVLKGAFGEERLYVEVQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD HGLGLV
Sbjct: 199 RLADKHGLGLV 209
>BAU89712.1 DNA polymerase III subunit alpha [Methylobacterium populi]
Length = 1173
Score = 125 bits (314), Expect = 7e-32
Identities = 63/71 (88%), Positives = 67/71 (94%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG +GPLDTSLRAGR DQAARRLEVL+ AFGEERLYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLTGPLDTSLRAGRADQAARRLEVLKGAFGEERLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADGNGLGIV 209
>WP_017486702.1 DNA polymerase III subunit alpha [Methylobacterium sp. MB200]
Length = 1173
Score = 125 bits (314), Expect = 7e-32
Identities = 63/71 (88%), Positives = 67/71 (94%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG +GPLDTSLRAGR DQAARRLEVL+ AFGEERLYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLTGPLDTSLRAGRADQAARRLEVLKGAFGEERLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADGNGLGIV 209
>SFK49452.1 DNA polymerase III, alpha subunit [Methylobacterium salsuginis]
Length = 1173
Score = 125 bits (313), Expect = 9e-32
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG +GPLDT LR+GR DQAARRLE L+ AFGEERLYVE+QRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLTGPLDTCLRSGRADQAARRLEALKAAFGEERLYVEVQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD HGLGLV
Sbjct: 199 RLADRHGLGLV 209
>WP_060768759.1 DNA polymerase III subunit alpha [Methylobacterium sp. AMS5]
AMB44104.1 DNA polymerase III subunit alpha
[Methylobacterium sp. AMS5]
Length = 1173
Score = 125 bits (313), Expect = 9e-32
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG +GPLDTSLRAGR DQAARRLE+L+ AFGEERLYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLTGPLDTSLRAGRADQAARRLEILKGAFGEERLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_012452924.1 DNA polymerase III subunit alpha [Methylobacterium populi]
ACB79172.1 DNA polymerase III, alpha subunit
[Methylobacterium populi BJ001] OAH27575.1 DNA
polymerase III subunit alpha [Methylobacterium populi]
Length = 1173
Score = 125 bits (313), Expect = 9e-32
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG +GPLDTSLRAGR DQAARRLEVL+ AFGE+RLYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLTGPLDTSLRAGRADQAARRLEVLKDAFGEDRLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADGNGLGIV 209
>WP_076640687.1 DNA polymerase III subunit alpha [Methylobacterium extorquens]
APX83710.1 DNA polymerase III subunit alpha
[Methylobacterium extorquens]
Length = 1173
Score = 124 bits (311), Expect = 2e-31
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG SGPLDTSLRAGR DQAARRLE+L+ AFGEE LYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLSGPLDTSLRAGRVDQAARRLEILKGAFGEEHLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_015950000.1 DNA polymerase III subunit alpha [Methylobacterium extorquens]
ACK82065.1 DNA polymerase III, alpha subunit
[Methylobacterium extorquens CM4]
Length = 1173
Score = 124 bits (311), Expect = 2e-31
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG SGPLDTSLRAGR DQAARRLE+L+ AFGEE LYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLSGPLDTSLRAGRVDQAARRLEILKGAFGEEHLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_003600454.1 MULTISPECIES: DNA polymerase III subunit alpha [Methylobacterium]
ABY29453.1 DNA polymerase III, alpha subunit
[Methylobacterium extorquens PA1] ACS38737.1 DNA
polymerase III, alpha subunit [Methylobacterium
extorquens AM1] EHP92345.1 DNA polymerase III, alpha
subunit [Methylobacterium extorquens DSM 13060]
KQP89723.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf119]
Length = 1173
Score = 124 bits (311), Expect = 2e-31
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG SGPLDTSLRAGR DQAARRLE+L+ AFGEE LYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLSGPLDTSLRAGRVDQAARRLEILKGAFGEEHLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_056502601.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf121]
KQQ06475.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf121]
Length = 1173
Score = 124 bits (311), Expect = 2e-31
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG SGPLDTSLRAGR DQAARRLE+L+ AFGEE LYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLSGPLDTSLRAGRVDQAARRLEILKGAFGEEHLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_056458128.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf90]
KQO91071.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf90]
Length = 1173
Score = 124 bits (311), Expect = 2e-31
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG SGPLDTSLRAGR DQAARRLE+L+ AFGEE LYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLSGPLDTSLRAGRVDQAARRLEILKGAFGEEHLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_015821632.1 DNA polymerase III subunit alpha [Methylobacterium extorquens]
CAX23125.1 DNA polymerase III, alpha subunit
[Methylobacterium extorquens DM4]
Length = 1173
Score = 124 bits (311), Expect = 2e-31
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG SGPLDTSLRAGR DQAARRLE+L+ AFGEE LYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLSGPLDTSLRAGRVDQAARRLEILKGAFGEEHLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_056114024.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf122]
KQQ21349.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf122]
Length = 1173
Score = 124 bits (310), Expect = 2e-31
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG SGPLDTSLRAGR DQAARRLE+L+ AFGEE LYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLSGPLDTSLRAGRLDQAARRLEILKGAFGEEHLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_056204965.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf123]
KQQ11719.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf123]
Length = 1173
Score = 124 bits (310), Expect = 2e-31
Identities = 61/71 (85%), Positives = 67/71 (94%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG +GPLDTSLRAGR DQAARRLE+L+ AFGE+RLYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLTGPLDTSLRAGRADQAARRLEILKGAFGEDRLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_056154562.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf92]
KQO88753.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf92]
Length = 1173
Score = 124 bits (310), Expect = 2e-31
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LIGLTGG SGPLDTSLRAGR DQAARRLE+L+ AFGEE LYVEIQRHGLDDERAVERELL
Sbjct: 139 LIGLTGGLSGPLDTSLRAGRLDQAARRLEILKGAFGEEHLYVEIQRHGLDDERAVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GLG+V
Sbjct: 199 RLADTNGLGIV 209
>WP_056407799.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf466]
KQT84365.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf466]
Length = 1165
Score = 107 bits (267), Expect = 1e-25
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LI LTGG SGPLDT+LRAGR++ AARRLE L AFG++ LYVEIQRHGLD+ER VEREL+
Sbjct: 137 LIALTGGPSGPLDTALRAGRSELAARRLERLVGAFGQDNLYVEIQRHGLDEERMVERELI 196
Query: 182 RLADHHGLGLV 214
RLAD HGLG+V
Sbjct: 197 RLADGHGLGIV 207
>WP_055885812.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf399]
KQT11833.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf399]
Length = 1165
Score = 107 bits (267), Expect = 1e-25
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LI LTGG SGPLDT+LRAGR++ AARRLE L AFG++ LYVEIQRHGLD+ER VEREL+
Sbjct: 137 LIALTGGPSGPLDTALRAGRSELAARRLERLVGAFGQDNLYVEIQRHGLDEERMVERELI 196
Query: 182 RLADHHGLGLV 214
RLAD HGLG+V
Sbjct: 197 RLADGHGLGIV 207
>WP_056284206.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf108]
KQP52654.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf108]
Length = 1165
Score = 107 bits (267), Expect = 1e-25
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LI LTGG SGPLDT+LRAGR++ AARRLE L AFG++ LYVEIQRHGLD+ER VEREL+
Sbjct: 137 LIALTGGPSGPLDTALRAGRSELAARRLERLVGAFGQDNLYVEIQRHGLDEERMVERELI 196
Query: 182 RLADHHGLGLV 214
RLAD HGLG+V
Sbjct: 197 RLADGHGLGIV 207
>WP_056254483.1 DNA polymerase III subunit alpha [Methylobacterium sp. Leaf93]
KQP06965.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf93]
Length = 1169
Score = 103 bits (256), Expect = 5e-24
Identities = 52/71 (73%), Positives = 59/71 (83%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LI LTGG +GPLDT+LR GR + AA RLE L+ AFGE+RLYVEI RHGLDDER VERELL
Sbjct: 139 LIALTGGTTGPLDTALRGGRVELAAARLEQLKGAFGEDRLYVEILRHGLDDERMVERELL 198
Query: 182 RLADHHGLGLV 214
RLAD +GL +V
Sbjct: 199 RLADSNGLSIV 209
>WP_056431789.1 MULTISPECIES: DNA polymerase III subunit alpha [Methylobacterium]
KQO60548.1 DNA polymerase III subunit alpha
[Methylobacterium sp. Leaf86] KQO86347.1 DNA polymerase
III subunit alpha [Methylobacterium sp. Leaf91]
Length = 1169
Score = 102 bits (255), Expect = 6e-24
Identities = 51/71 (71%), Positives = 59/71 (83%)
Frame = +2
Query: 2 LIGLTGGFSGPLDTSLRAGRTDQAARRLEVLRQAFGEERLYVEIQRHGLDDERAVERELL 181
LI LTGG +GPLDT+LR GR + AA RL L+QAFGE+RLYVEI RHGLDDER VEREL+
Sbjct: 139 LIALTGGTTGPLDTALRGGRVELAAARLAQLKQAFGEDRLYVEILRHGLDDERMVERELI 198
Query: 182 RLADHHGLGLV 214
RLAD +GL +V
Sbjct: 199 RLADSNGLSIV 209