BLASTX nr result
ID: Glycyrrhiza32_contig00024370
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00024370
(228 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AGW45386.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 109 4e-26
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 109 4e-26
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 109 4e-26
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 109 4e-26
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 109 4e-26
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 109 4e-26
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 109 4e-26
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 109 4e-26
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 109 4e-26
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 108 1e-25
AAX19931.1 viral replicase [Nandina mosaic virus] 107 1e-25
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 107 2e-25
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 103 6e-24
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 103 6e-24
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 103 6e-24
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 103 6e-24
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 103 6e-24
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678... 102 8e-24
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 100 4e-23
NP_042695.1 RNA-dependent RNA polymerase [Cassava common mosaic ... 67 3e-11
>AGW45386.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 653 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 708
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 109 bits (272), Expect = 4e-26
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1329 AGVKDAIANVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1384
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 108 bits (269), Expect = 1e-25
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGV+DAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1327 AGVRDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1382
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 107 bits (268), Expect = 1e-25
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGD+L DLLSPRQAHLHQVTVRDLVKFGGSPFL
Sbjct: 1310 AGVKDAITNVVANYSLDAKLAYSLGDELHDLLSPRQAHLHQVTVRDLVKFGGSPFL 1365
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 107 bits (267), Expect = 2e-25
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP Q HLHQVTVRDLVKFGGSPFL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQXHLHQVTVRDLVKFGGSPFL 1377
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 103 bits (256), Expect = 6e-24
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 103 bits (256), Expect = 6e-24
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 103 bits (256), Expect = 6e-24
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 103 bits (256), Expect = 6e-24
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 103 bits (256), Expect = 6e-24
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1322 AGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1 RNA-dependent
RNA polymerase [Tulip virus X]
Length = 1361
Score = 102 bits (255), Expect = 8e-24
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1
Query: 4 GVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
G KDAI+NV+ANYSLDAK+AYSLGDDLQDLLSP QAHLHQVTVRDL KFGGSPFL
Sbjct: 1304 GRKDAITNVVANYSLDAKMAYSLGDDLQDLLSPEQAHLHQVTVRDLTKFGGSPFL 1358
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 100 bits (250), Expect = 4e-23
Identities = 50/56 (89%), Positives = 52/56 (92%)
Frame = +1
Query: 1 AGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
AGVKDAI+NV+ NYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1322 AGVKDAITNVVDNYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
>NP_042695.1 RNA-dependent RNA polymerase [Cassava common mosaic virus] AAC54775.1
ORF 1; putative RNA dependent RNA polymerase [Cassava
common mosaic virus] prf||2207297A ORF 1 [Cassava common
mosaic virus]
Length = 1449
Score = 67.0 bits (162), Expect = 3e-11
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = +1
Query: 10 KDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 168
K + N + NY+ D KLAY LGDDL +LL+P QA LHQVTVRD++K G S L
Sbjct: 1395 KRELDNCLENYARDMKLAYDLGDDLLELLTPEQAQLHQVTVRDMIKLGASDIL 1447