BLASTX nr result

ID: Glycyrrhiza32_contig00023796 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00023796
         (389 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU47186.1 hypothetical protein TSUD_350510 [Trifolium subterran...    54   9e-12
KYP54665.1 Arginine/serine-rich-splicing factor RSP31 [Cajanus c...    61   2e-08

>GAU47186.1 hypothetical protein TSUD_350510 [Trifolium subterraneum]
          Length = 291

 Score = 54.3 bits (129), Expect(2) = 9e-12
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +3

Query: 228 LLCNFFLEGNLPACLLSFYPQICIFS 305
           L  NFFLEGNLPACLLSFYPQICIFS
Sbjct: 53  LSANFFLEGNLPACLLSFYPQICIFS 78



 Score = 42.7 bits (99), Expect(2) = 9e-12
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = +1

Query: 160 VSFDAGTSTKGKYAELLSWLANLFSAIFF 246
           V   +GT+TKGKYAELLSWLANL SA FF
Sbjct: 31  VDMKSGTTTKGKYAELLSWLANL-SANFF 58


>KYP54665.1 Arginine/serine-rich-splicing factor RSP31 [Cajanus cajan]
          Length = 354

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = +1

Query: 238 IFFWKETFLLVCSPSIHRSAFSHLMLIRHPLPSSPNIDIFIPSEC 372
           IFFWKETFLLVC PS +RSAFSHL +IRH L SS + +I I  EC
Sbjct: 55  IFFWKETFLLVCPPSTYRSAFSHL-IIRHSLTSSSSPNIDISPEC 98


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