BLASTX nr result

ID: Glycyrrhiza32_contig00023713 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00023713
         (436 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009232109.1 ribosomal protein L2 (chloroplast) [Lavandula ang...    91   1e-18
GAU19192.1 hypothetical protein TSUD_198740 [Trifolium subterran...    81   3e-16
AGC78986.1 hypothetical protein (mitochondrion) [Vicia faba]           62   9e-10
YP_004222366.1 hypothetical protein BevumaM_p133 (mitochondrion)...    59   1e-08

>YP_009232109.1 ribosomal protein L2 (chloroplast) [Lavandula angustifolia]
           AMA20327.1 ribosomal protein L2 (chloroplast) [Lavandula
           angustifolia]
          Length = 567

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 68/136 (50%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
 Frame = +3

Query: 24  TPL*PLSKRSFFLYYNY-SSSKSISCFLEL---GEAKLQTKRLGCSLH*FDFT*LKIKDR 191
           TPL  LSKRSFFL     S  K    FL+L   G+A  +TKRLGCSLH FDFT LKIKDR
Sbjct: 352 TPLSLLSKRSFFLSLQVLSRGKENFYFLKLKLPGKASNKTKRLGCSLHCFDFTLLKIKDR 411

Query: 192 GRAGSEGSFSRQQAPLFE-ASPHQRKPLHASLLYRVP----------------CAPLNYK 320
           GRAGSEGSFSRQ+A      +P++ K    +   R P                CAPL YK
Sbjct: 412 GRAGSEGSFSRQRASSKHLPTPNKMKSSKRNFQKRAPIRENHCTLASCIGFQTCAPLFYK 471

Query: 321 LALKPLLS*WLGY*KK 368
           L L P L   +GY KK
Sbjct: 472 L-LSPYLLTKMGYLKK 486


>GAU19192.1 hypothetical protein TSUD_198740 [Trifolium subterraneum]
          Length = 210

 Score = 81.3 bits (199), Expect = 3e-16
 Identities = 38/40 (95%), Positives = 38/40 (95%)
 Frame = +3

Query: 189 RGRAGSEGSFSRQQAPLFEASPHQRKPLHASLLYRVPCAP 308
           RGRAGSEGSFSRQQAPLFEASPHQRKPLHASLLYRV C P
Sbjct: 107 RGRAGSEGSFSRQQAPLFEASPHQRKPLHASLLYRVACLP 146


>AGC78986.1 hypothetical protein (mitochondrion) [Vicia faba]
          Length = 108

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +1

Query: 22  EPPYDRYQREAFSYTITIVVASLFLVFWN 108
           EPPYDRYQREAFSYTITIVVASLF VFWN
Sbjct: 80  EPPYDRYQREAFSYTITIVVASLFRVFWN 108


>YP_004222366.1 hypothetical protein BevumaM_p133 (mitochondrion) [Beta vulgaris
           subsp. maritima] YP_004842171.1 hypothetical protein
           BemaM_p127 (mitochondrion) [Beta macrocarpa] CBX33217.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima] CBX33312.1 hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
           CBJ20699.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBX24976.1 hypothetical
           protein (mitochondrion) [Beta macrocarpa] CBL54141.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 125

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 12/74 (16%)
 Frame = +1

Query: 1   LYLRSD--YEPPYDRYQREAFSYTITIVVA----------SLFLVFWN*GKQSFKQRGWA 144
           LYLRSD     PYDRYQREAFSYTI++++               + W    QSFK  GWA
Sbjct: 58  LYLRSDPFRTNPYDRYQREAFSYTISLLLCFGIRLKPCLQQSIPIAW----QSFK--GWA 111

Query: 145 VHFIDLTSLDLRLK 186
           VHFI  TSL LRLK
Sbjct: 112 VHFIHFTSLYLRLK 125


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