BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00021598
         (886 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006581143.1 PREDICTED: pentatricopeptide repeat-containing pr...    49   3e-06
KHN20127.1 Pentatricopeptide repeat-containing protein [Glycine ...    45   9e-06

>XP_006581143.1 PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Glycine max]
          Length = 598

 Score = 48.5 bits (114), Expect(3) = 3e-06
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
 Frame = +2

Query: 233 CLYFLETINI*ICIAIPSKILLIVFEPEARFRDKAYLI*F--FCSTWRGPSFMITILNK 403
           CL FLE I+I ICIAIPSK LLI+F P+ R+     ++ F   C TW     ++ +LNK
Sbjct: 520 CLLFLEIISIYICIAIPSKFLLIIFGPDIRWFYALAVVKFTLLCKTW---YLIMGLLNK 575



 Score = 30.0 bits (66), Expect(3) = 3e-06
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +3

Query: 3   GMPVEAARVKEALCQXXXXXXXXXXXXFHEST 98
           GMP EAARVKE L Q            +HE+T
Sbjct: 472 GMPGEAARVKEVLAQNLTLGTTSSKKSYHETT 503



 Score = 20.4 bits (41), Expect(3) = 3e-06
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 190 MFPACGTKEC 219
           +FPACG+  C
Sbjct: 505 VFPACGSMAC 514


>KHN20127.1 Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 549

 Score = 44.7 bits (104), Expect(3) = 9e-06
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = +2

Query: 233 CLYFLETINI*ICIAIPSKILLIVFEPEAR 322
           CL FLE I+I ICIAIPSK LLI+F P+ R
Sbjct: 520 CLLFLEIISIYICIAIPSKFLLIIFGPDIR 549



 Score = 32.3 bits (72), Expect(3) = 9e-06
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +3

Query: 3   GMPVEAARVKEALCQXXXXXXXXXXXXFHESTN 101
           GMP EAARVKE L Q            +HE+TN
Sbjct: 472 GMPGEAARVKEVLAQNLTLGTTSSKKSYHETTN 504



 Score = 20.4 bits (41), Expect(3) = 9e-06
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 190 MFPACGTKEC 219
           +FPACG+  C
Sbjct: 505 VFPACGSMAC 514