BLASTX nr result

ID: Glycyrrhiza32_contig00021389 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00021389
         (250 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_024343421.1 type IV secretion protein [Bradyrhizobium japonicum]    52   4e-06

>WP_024343421.1 type IV secretion protein [Bradyrhizobium japonicum]
          Length = 189

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
 Frame = +3

Query: 21  PSQPPADEPAA-----NLSSSTDLARERPSWDVYRAGLGMSAFVYGR 146
           P  PP D   +     NL++     RERP+WDVYR+GLG SAFVYGR
Sbjct: 142 PRTPPGDADISTGETPNLNAPAPAIRERPNWDVYRSGLGTSAFVYGR 188