BLASTX nr result

ID: Glycyrrhiza32_contig00019480 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00019480
         (771 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KOM53246.1 hypothetical protein LR48_Vigan09g190500 [Vigna angul...    55   5e-06
XP_018503964.1 PREDICTED: F-box/kelch-repeat protein At3g06240-l...    57   6e-06
XP_009788293.1 PREDICTED: F-box protein At3g08750-like [Nicotian...    55   7e-06

>KOM53246.1 hypothetical protein LR48_Vigan09g190500 [Vigna angularis]
           KOM56662.1 hypothetical protein LR48_Vigan10g255400
           [Vigna angularis]
          Length = 138

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = +3

Query: 252 AQFLPHYLVLRSLSRLPVKSLVRNKCVSRRWDSLIFDKDFIKLHHDRA 395
           A  LP  L+   LS LP KSL+R +CVS  W+SLI + DF++LHH+R+
Sbjct: 8   ATILPDTLISEILSWLPAKSLMRFRCVSNTWNSLIINPDFLELHHERS 55


>XP_018503964.1 PREDICTED: F-box/kelch-repeat protein At3g06240-like [Pyrus x
           bretschneideri]
          Length = 405

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +3

Query: 234 QYQ-EEGAQFLPHYLVLRSLSRLPVKSLVRNKCVSRRWDSLIFDKDFIKLHHDRAKRWN 407
           +YQ  E    LP  +++  LSRL VKSL R KCVS+ W SLI D DF+K+H ++A  +N
Sbjct: 9   EYQLTESPNVLPSDIIINILSRLAVKSLCRFKCVSKPWRSLISDHDFVKVHFNKALEYN 67


>XP_009788293.1 PREDICTED: F-box protein At3g08750-like [Nicotiana sylvestris]
          Length = 160

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 31/78 (39%), Positives = 44/78 (56%)
 Frame = +3

Query: 252 AQFLPHYLVLRSLSRLPVKSLVRNKCVSRRWDSLIFDKDFIKLHHDRAKRWNFSCVT*GR 431
           ++FLP  +++  L  L VK L+R K V R W +LI    FI +HHDRAKR N  C     
Sbjct: 5   SKFLPGEIIMAILLALTVKPLLRFKSVCRSWHALILSLPFINMHHDRAKRNNLICFY--- 61

Query: 432 GRGKVHLFHFISFQE*KT 485
              K H+++ +S  E +T
Sbjct: 62  ---KQHVYNSVSVCEDET 76


Top