BLASTX nr result
ID: Glycyrrhiza32_contig00019438
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00019438
(555 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019427158.1 PREDICTED: uncharacterized protein LOC109335479 [... 89 4e-20
KYP48835.1 hypothetical protein KK1_029478 [Cajanus cajan] 92 2e-19
CAC95126.1 gag-pol polyprotein [Populus deltoides] 87 4e-19
CAN69462.1 hypothetical protein VITISV_002919 [Vitis vinifera] 71 7e-15
OMO83306.1 Integrase, catalytic core [Corchorus capsularis] 66 6e-13
OMO50708.1 Zinc finger, CCHC-type [Corchorus capsularis] 64 1e-11
OMO63131.1 Integrase, catalytic core [Corchorus capsularis] 64 1e-11
AGJ83729.1 gag-pol polyprotein, partial [Caragana korshinskii] 68 6e-10
XP_006376176.1 hypothetical protein POPTR_0013s10530g [Populus t... 65 2e-09
OMO56344.1 Integrase, catalytic core [Corchorus capsularis] 46 4e-06
>XP_019427158.1 PREDICTED: uncharacterized protein LOC109335479 [Lupinus
angustifolius]
Length = 749
Score = 88.6 bits (218), Expect(2) = 4e-20
Identities = 58/122 (47%), Positives = 71/122 (58%), Gaps = 14/122 (11%)
Frame = +1
Query: 91 VVAQPHAMSVSFNIG-SAIQEADWDRP*AGGLNILDELRFPDIVAS------------SV 231
+ +QP+AMSVS N+G S+ + L+ D P++ S +V
Sbjct: 273 LASQPNAMSVSPNVGLSSAGSSGVGSVSTPKLSFSDVYYIPNLTLSLASVSQLCDSAPTV 332
Query: 232 DLSTFCLNXXXXXFYLRHSCLGHVFS-RLKYLASTGAIGKL*SNDISDCCGYKLAKFSVL 408
DLS+F LN FYL HS LGHV S RLKYLASTG +G L N+ISDCCG KLAKFS L
Sbjct: 333 DLSSFRLNLSSSKFYLWHSRLGHVSSPRLKYLASTGVLGSLQPNNISDCCGCKLAKFSAL 392
Query: 409 PF 414
PF
Sbjct: 393 PF 394
Score = 36.6 bits (83), Expect(2) = 4e-20
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 423 KSVPVFVAPFDLVHYDVW*PSSVLTIS 503
KSV + APFDLVH DVW PS + T S
Sbjct: 396 KSVSISKAPFDLVHSDVWGPSPIATKS 422
>KYP48835.1 hypothetical protein KK1_029478 [Cajanus cajan]
Length = 244
Score = 92.0 bits (227), Expect = 2e-19
Identities = 51/81 (62%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Frame = +1
Query: 175 GGLNILDELRFPDIVASSVDLSTFCLNXXXXXFYLRHSCLGHVFS-RLKYLASTGAIGKL 351
G L + DEL+ P++VAS VDLS+F LN FYL HS LGHV S RLKYLAST A+GKL
Sbjct: 152 GRLYMFDELKVPNVVASIVDLSSFNLNSASSSFYLWHSRLGHVSSSRLKYLASTRALGKL 211
Query: 352 *SNDISDCCGYKLAKFSVLPF 414
++DI CCG KLAKF LPF
Sbjct: 212 QTSDIFYCCGCKLAKFIALPF 232
>CAC95126.1 gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 87.4 bits (215), Expect(3) = 4e-19
Identities = 51/81 (62%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = +1
Query: 178 GLNILDELRFPDIVASS-VDLSTFCLNXXXXXFYLRHSCLGHVFS-RLKYLASTGAIGKL 351
GL ILDEL+ P +VA++ VDLS F L+ FYL HS LGHV S RL++LASTGA+G L
Sbjct: 446 GLYILDELKVPVVVAATTVDLSFFRLSLSSSSFYLWHSRLGHVSSSRLRFLASTGALGNL 505
Query: 352 *SNDISDCCGYKLAKFSVLPF 414
+ DISDC G KLAKFS LPF
Sbjct: 506 KTCDISDCSGCKLAKFSALPF 526
Score = 32.3 bits (72), Expect(3) = 4e-19
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 423 KSVPVFVAPFDLVHYDVW*PSSVLT 497
+S V +PFDL+H DVW PS V T
Sbjct: 528 RSTSVSSSPFDLIHSDVWGPSPVST 552
Score = 21.9 bits (45), Expect(3) = 4e-19
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 134 DLQFRRLIGIGHRQGDL 184
DLQ ++LIG G R+ L
Sbjct: 431 DLQSQKLIGTGRRENGL 447
>CAN69462.1 hypothetical protein VITISV_002919 [Vitis vinifera]
Length = 993
Score = 70.9 bits (172), Expect(2) = 7e-15
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 178 GLNILDELRFP---DIVASSVDLSTFCLNXXXXXFYLRHSCLGHVFS-RLKYLASTGAIG 345
GL ++DELR P ++ A SVDLS+F L FY HS LGH+ + LKYL S G +G
Sbjct: 344 GLYVMDELRLPRVSNLAALSVDLSSFHLTSSSSXFYSWHSRLGHISAPHLKYLISKGFLG 403
Query: 346 KL*SNDISDCCGYKLAKFSVLPFGMA 423
++DIS C G KLAKFS L F +
Sbjct: 404 NFQTHDISYCSGCKLAKFSALLFNQS 429
Score = 36.6 bits (83), Expect(2) = 7e-15
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 408 AIWNGKSVPVFVAPFDLVHYDVW*PSSVLT 497
A+ +SV FVAPFDL+H +VW PS V T
Sbjct: 423 ALLFNQSVSPFVAPFDLIHSNVWGPSXVAT 452
>OMO83306.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1165
Score = 66.2 bits (160), Expect(2) = 6e-13
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 175 GGLNILDELRFPDIVASSVDLSTFCLNXXXXXFYLRHSCLGHVFS-RLKYLASTGAIGKL 351
GGL +LD L P I + +S F L+ F+L HS LGHV S RL+Y+ S G +G +
Sbjct: 506 GGLYVLDFLFVPQI-QQNFAMSAFVLDKNSSSFHLWHSRLGHVSSSRLRYMLSVGLLGNV 564
Query: 352 *SNDISDCCGYKLAKFSVLPF 414
+DISDC G LAKFS LPF
Sbjct: 565 KYSDISDCKGCILAKFSALPF 585
Score = 34.7 bits (78), Expect(2) = 6e-13
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +3
Query: 423 KSVPVFVAPFDLVHYDVW*PSSVLT 497
KS + APFDLVH DVW PS V T
Sbjct: 587 KSTSISNAPFDLVHSDVWGPSPVAT 611
>OMO50708.1 Zinc finger, CCHC-type [Corchorus capsularis]
Length = 2413
Score = 64.3 bits (155), Expect(2) = 1e-11
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 175 GGLNILDELRFPDIVASSVDLSTFCLNXXXXXFYLRHSCLGHVFS-RLKYLASTGAIGKL 351
GGL +L+ L P I + V + F L+ F+L HS LGHV S RL+Y++S G +G +
Sbjct: 1556 GGLYMLEFLFVPPIKQNFV-MPAFVLDKNSSSFHLWHSRLGHVSSSRLRYMSSVGLLGNV 1614
Query: 352 *SNDISDCCGYKLAKFSVLPF 414
+DISDC KLAKFS LPF
Sbjct: 1615 KYSDISDCKACKLAKFSTLPF 1635
Score = 32.0 bits (71), Expect(2) = 1e-11
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +3
Query: 423 KSVPVFVAPFDLVHYDVW*PSSVLT 497
KS V A FDLVH DVW PS V T
Sbjct: 1637 KSTSVSNAAFDLVHSDVWGPSPVAT 1661
>OMO63131.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1000
Score = 64.3 bits (155), Expect(2) = 1e-11
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 175 GGLNILDELRFPDIVASSVDLSTFCLNXXXXXFYLRHSCLGHVFS-RLKYLASTGAIGKL 351
GGL +L+ L P I + V + F L+ F+L HS LGHV S RL+Y++S G +G +
Sbjct: 388 GGLYMLEFLFVPPIKQNFV-MPAFVLDKNSSSFHLWHSRLGHVSSSRLRYMSSVGLLGNV 446
Query: 352 *SNDISDCCGYKLAKFSVLPF 414
+DISDC KLAKFS LPF
Sbjct: 447 KYSDISDCKACKLAKFSALPF 467
Score = 32.0 bits (71), Expect(2) = 1e-11
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +3
Query: 423 KSVPVFVAPFDLVHYDVW*PSSVLT 497
KS V A FDLVH DVW PS V T
Sbjct: 469 KSTSVSNAAFDLVHSDVWGPSPVAT 493
>AGJ83729.1 gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 67.8 bits (164), Expect = 6e-10
Identities = 37/61 (60%), Positives = 43/61 (70%), Gaps = 5/61 (8%)
Frame = +1
Query: 292 LGHVF-SRLKYLASTGAIGKL*SNDISDCCGYKLAKFSVLPFGMAKVFQF----LLHLLT 456
LGHV SRLKYLASTGA+GKL ++DISDCCG KLAKFS LPF + + L+H
Sbjct: 1 LGHVSASRLKYLASTGALGKLQTSDISDCCGCKLAKFSALPFSKSVSLSYAPFDLVHSDV 60
Query: 457 W 459
W
Sbjct: 61 W 61
>XP_006376176.1 hypothetical protein POPTR_0013s10530g [Populus trichocarpa]
ERP53973.1 hypothetical protein POPTR_0013s10530g
[Populus trichocarpa]
Length = 324
Score = 65.5 bits (158), Expect = 2e-09
Identities = 39/81 (48%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = +1
Query: 178 GLNILDELRFPDIVASS-VDLSTFCLNXXXXXFYLRHSCLGHVFS-RLKYLASTGAIGKL 351
GL IL+EL+ ++A++ VDLS+F L+ FYL +S LGHV S RL++ S A+ L
Sbjct: 243 GLYILNELKISVVIAAAGVDLSSFHLSHSSSSFYLWYSHLGHVLSSRLRFFTSIRALENL 302
Query: 352 *SNDISDCCGYKLAKFSVLPF 414
+ +IS+C G +LAKFS LPF
Sbjct: 303 QTCNISNCSGCRLAKFSTLPF 323
>OMO56344.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1095
Score = 45.8 bits (107), Expect(2) = 4e-06
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 307 SRLKYLASTGAIGKL*SNDISDCCGYKLAKFSVLPF 414
SRL+Y++S G +G + +DISDC KLAKFS LPF
Sbjct: 476 SRLRYMSSVGLLGNVKYSDISDCKACKLAKFSALPF 511
Score = 32.0 bits (71), Expect(2) = 4e-06
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +3
Query: 423 KSVPVFVAPFDLVHYDVW*PSSVLT 497
KS V A FDLVH DVW PS V T
Sbjct: 513 KSTSVSNAAFDLVHSDVWGPSPVAT 537