BLASTX nr result
ID: Glycyrrhiza32_contig00019134
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00019134
(1108 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KRH01470.1 hypothetical protein GLYMA_18G279200 [Glycine max] 421 e-145
XP_003551792.1 PREDICTED: DNA-directed RNA polymerase III subuni... 419 e-145
KYP76495.1 DNA-directed RNA polymerase III subunit RPC6, partial... 409 e-141
XP_007139345.1 hypothetical protein PHAVU_008G021700g [Phaseolus... 407 e-140
XP_014497473.1 PREDICTED: probable DNA-directed RNA polymerase I... 405 e-140
XP_017419664.1 PREDICTED: DNA-directed RNA polymerase III subuni... 398 e-137
XP_015932888.1 PREDICTED: DNA-directed RNA polymerase III subuni... 389 e-133
XP_015872858.1 PREDICTED: DNA-directed RNA polymerase III subuni... 328 e-109
AFK40562.1 unknown [Lotus japonicus] 319 e-106
XP_018829908.1 PREDICTED: DNA-directed RNA polymerase III subuni... 319 e-105
XP_004491901.1 PREDICTED: DNA-directed RNA polymerase III subuni... 316 e-104
XP_018831899.1 PREDICTED: DNA-directed RNA polymerase III subuni... 312 e-103
OAY52825.1 hypothetical protein MANES_04G114300 [Manihot esculen... 307 e-101
XP_009345829.1 PREDICTED: DNA-directed RNA polymerase III subuni... 304 e-100
XP_008339509.1 PREDICTED: DNA-directed RNA polymerase III subuni... 304 e-100
XP_002297621.2 hypothetical protein POPTR_0001s04090g [Populus t... 305 2e-99
XP_011008461.1 PREDICTED: DNA-directed RNA polymerase III subuni... 303 3e-99
XP_011003010.1 PREDICTED: DNA-directed RNA polymerase III subuni... 303 5e-99
XP_017182596.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 304 8e-99
XP_002509507.1 PREDICTED: DNA-directed RNA polymerase III subuni... 301 1e-98
>KRH01470.1 hypothetical protein GLYMA_18G279200 [Glycine max]
Length = 268
Score = 421 bits (1082), Expect = e-145
Identities = 201/240 (83%), Positives = 217/240 (90%)
Frame = +3
Query: 132 GMSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXX 311
GMS +QGSSSLKRKRQ+LALV+ SLTDGER+LYNLIHSKKDMGIWTGDMKRETNLPD
Sbjct: 29 GMSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIV 88
Query: 312 XXXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDV 491
IKEVVNIQNKGRKHYMAAEFEPSKEITGG WY++G LDT+FINLVKDV
Sbjct: 89 KKSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDV 148
Query: 492 CLKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFA 671
CLKYIFRQKV TRDGV+EWSRKSGVF+ EVTTQQI+EILRTLVLDDEI+EVKSTGFGDF+
Sbjct: 149 CLKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFS 208
Query: 672 SVPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
SVPVGR+CY+CKSKGG RGEQKPGAMASIPCGVCPR+N+CTPDGIISPRTC YYQKWLDF
Sbjct: 209 SVPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 268
>XP_003551792.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Glycine
max] XP_014625767.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC6 [Glycine max] KHN13797.1
DNA-directed RNA polymerase III subunit RPC6 [Glycine
soja] KRH01471.1 hypothetical protein GLYMA_18G279200
[Glycine max]
Length = 239
Score = 419 bits (1076), Expect = e-145
Identities = 200/239 (83%), Positives = 216/239 (90%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MS +QGSSSLKRKRQ+LALV+ SLTDGER+LYNLIHSKKDMGIWTGDMKRETNLPD
Sbjct: 1 MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEVVNIQNKGRKHYMAAEFEPSKEITGG WY++G LDT+FINLVKDVC
Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVC 120
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
LKYIFRQKV TRDGV+EWSRKSGVF+ EVTTQQI+EILRTLVLDDEI+EVKSTGFGDF+S
Sbjct: 121 LKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSS 180
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
VPVGR+CY+CKSKGG RGEQKPGAMASIPCGVCPR+N+CTPDGIISPRTC YYQKWLDF
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>KYP76495.1 DNA-directed RNA polymerase III subunit RPC6, partial [Cajanus
cajan]
Length = 234
Score = 409 bits (1051), Expect = e-141
Identities = 196/233 (84%), Positives = 210/233 (90%)
Frame = +3
Query: 153 SSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXXXXXXXX 332
SS+LKRKRQ+LA VSESLTDGER+LYNLIH+KKDMGIWTGDMKRETNLPD
Sbjct: 2 SSTLKRKRQDLASVSESLTDGERVLYNLIHNKKDMGIWTGDMKRETNLPDSIVKKSLKLL 61
Query: 333 XXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVCLKYIFR 512
IKEVVNIQNKGRKHYMAAEFEPSKEITGGDWY++GSLDTEFINLVKDVCLKYIFR
Sbjct: 62 QSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTEFINLVKDVCLKYIFR 121
Query: 513 QKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFASVPVGRV 692
QKV TRDGVLEWSRKSGVF+ EVTTQQI+EILR LVLDDEI+EVKSTGFGDF+SVPVGR+
Sbjct: 122 QKVATRDGVLEWSRKSGVFTVEVTTQQIDEILRALVLDDEILEVKSTGFGDFSSVPVGRI 181
Query: 693 CYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
CY+CKSK G RGEQKPGAMASIPCGVCPR+N CTPDGIISPRTC Y+QKWLDF
Sbjct: 182 CYRCKSKSGNRGEQKPGAMASIPCGVCPRINSCTPDGIISPRTCVYFQKWLDF 234
>XP_007139345.1 hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
ESW11339.1 hypothetical protein PHAVU_008G021700g
[Phaseolus vulgaris]
Length = 239
Score = 407 bits (1046), Expect = e-140
Identities = 196/239 (82%), Positives = 212/239 (88%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MS++Q SSSLKRKRQ+LALVS S+TDGER+LYNLIHSKKDMGIWTGDMKRETNLPD
Sbjct: 1 MSQLQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEVVNIQNKGRKHYMAAEFEPSKEITGGDWY++GSLDT+FINLVK+VC
Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVC 120
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
LK IFRQKV T DGVLEWSRKSGVF+ EVT QQI+EILR LVLDDEI EVKSTG GDF+S
Sbjct: 121 LKCIFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSS 180
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
VPVGR+CY+CKSKGG RGEQKPGAMASIPCGVCPR+N+CTPDGIISPRTC YYQKWLDF
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>XP_014497473.1 PREDICTED: probable DNA-directed RNA polymerase III subunit rpc6
[Vigna radiata var. radiata]
Length = 239
Score = 405 bits (1042), Expect = e-140
Identities = 193/239 (80%), Positives = 211/239 (88%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MS++QGSSSLKRKRQ+LALVS S+TDGER+LYNLIHSKKD+GIWTGDMKRETNLPD
Sbjct: 1 MSQLQGSSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDIGIWTGDMKRETNLPDSIVK 60
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEVVNIQNKGRKHYMAAEFEPSKEITGGDWY++GSLDT FINLVKDVC
Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTYFINLVKDVC 120
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
LKYIFRQKV T DG+LEWSRKSGVF+ +T QQ +EILR LVLDDEI EVKSTG GDF+S
Sbjct: 121 LKYIFRQKVATCDGILEWSRKSGVFTVGITAQQTDEILRALVLDDEIEEVKSTGIGDFSS 180
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
VPVGR+CY+CKSKGG+RGEQKPGAMA IPCGVCPR+N+CTPDGIISPRTC YYQKWLDF
Sbjct: 181 VPVGRICYRCKSKGGIRGEQKPGAMAFIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>XP_017419664.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Vigna
angularis] XP_017419665.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC6 [Vigna angularis]
XP_017419666.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC6 [Vigna angularis] XP_017419667.1
PREDICTED: DNA-directed RNA polymerase III subunit RPC6
[Vigna angularis] XP_017419668.1 PREDICTED: DNA-directed
RNA polymerase III subunit RPC6 [Vigna angularis]
XP_017419669.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC6 [Vigna angularis] KOM36675.1
hypothetical protein LR48_Vigan03g005600 [Vigna
angularis] BAT83161.1 hypothetical protein
VIGAN_04027100 [Vigna angularis var. angularis]
Length = 240
Score = 398 bits (1023), Expect = e-137
Identities = 192/240 (80%), Positives = 210/240 (87%), Gaps = 1/240 (0%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQE-LALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXX 311
MS++Q SSSLKRKRQ+ LALVS S+TDGER+LYNLIHSKKDMG+WTGDMKRETNLPD
Sbjct: 1 MSQLQESSSLKRKRQQDLALVSGSMTDGERVLYNLIHSKKDMGMWTGDMKRETNLPDSIV 60
Query: 312 XXXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDV 491
IKEVVNIQNKGRKHYMAAEFEPSKEITGGDWY++GSLDT FINLVKDV
Sbjct: 61 KKSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTYFINLVKDV 120
Query: 492 CLKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFA 671
CLK IFRQKV T DG+LEWSRKSGVF+ E+T QQ +EILR LVLDDEI EVKSTG GDF+
Sbjct: 121 CLKCIFRQKVATYDGILEWSRKSGVFTVEITAQQTDEILRALVLDDEIEEVKSTGIGDFS 180
Query: 672 SVPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
SVPVGR+CY+CK KGG+RGEQKPGAMASIPCGVCPR+N+CTPDGIISPRTC YYQKWLDF
Sbjct: 181 SVPVGRICYRCKRKGGIRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 240
>XP_015932888.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Arachis duranensis] XP_015932889.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis duranensis] XP_015932890.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis duranensis] XP_016166496.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis ipaensis] XP_016166497.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis ipaensis] XP_016166498.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis ipaensis] XP_016166499.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis ipaensis] XP_016166500.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis ipaensis] XP_016166501.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis ipaensis]
Length = 239
Score = 389 bits (998), Expect = e-133
Identities = 187/239 (78%), Positives = 208/239 (87%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MSR+QGSSS ++++ELALVS++LTDGER+LYNLI SK+DMGIW+GDMKRETNLPD
Sbjct: 1 MSRLQGSSSSLKRKRELALVSDTLTDGERVLYNLILSKRDMGIWSGDMKRETNLPDNVVK 60
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEVVNIQNK RKHYMAA+FEPSKEITGGDWYSEG+LD E IN VK VC
Sbjct: 61 KSLKLLQSKGLIKEVVNIQNKARKHYMAAQFEPSKEITGGDWYSEGNLDKELINAVKSVC 120
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
LKYI RQKV T DGVLEWSRKSGVF+AEV+ QQIEEILRTLVLDDEIIEVKSTG+GDF +
Sbjct: 121 LKYISRQKVVTCDGVLEWSRKSGVFTAEVSNQQIEEILRTLVLDDEIIEVKSTGYGDFEN 180
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
VPVGRVCYKCKSKGGVRGE K GAM+SIPCGVCPR+N+C+PDGI+SPRTC YYQKWLDF
Sbjct: 181 VPVGRVCYKCKSKGGVRGEPKDGAMSSIPCGVCPRINFCSPDGIVSPRTCVYYQKWLDF 239
>XP_015872858.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ziziphus
jujuba]
Length = 238
Score = 328 bits (842), Expect = e-109
Identities = 160/239 (66%), Positives = 190/239 (79%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MSR+QG +LKRKR + SESLT+ ERILY++I SK+DMGIWT DMKRETNLPD
Sbjct: 1 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 60
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEVVNIQNKGRKHYMAAEFEPSKEI+GG WY EGSLDTEFI+L+KD C
Sbjct: 61 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 120
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
K I++Q+V T +G+L+ R++G+F E +TQQIEEILR LVLD+ +++VKS G G+F S
Sbjct: 121 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 180
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
+PVG+VCYKC +K GVRGE K GAMASIPCGVCPR+N+CTPDGIISP TC YY KWLDF
Sbjct: 181 IPVGKVCYKCTNK-GVRGEPKAGAMASIPCGVCPRINHCTPDGIISPTTCVYYNKWLDF 238
>AFK40562.1 unknown [Lotus japonicus]
Length = 232
Score = 319 bits (817), Expect = e-106
Identities = 156/241 (64%), Positives = 187/241 (77%), Gaps = 2/241 (0%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MSR+ GSSSLKRKR +L TDGE ++Y LIHSK++MGIW D+KRET +PD
Sbjct: 1 MSRLPGSSSLKRKRPDL-------TDGEDVVYKLIHSKENMGIWIADIKRETKMPDNMVK 53
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
+KEVVNIQ++G+K YMA +FEPSKE+TGGDWY++G DT+FIN KDV
Sbjct: 54 KCIKSLQDKNLVKEVVNIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAKDVF 113
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
LKY+F+QKV T DGVLEW+RK+ VFS +VT QQ+EEILR LVLDDEIIEV+STG +FAS
Sbjct: 114 LKYVFKQKVATCDGVLEWTRKNAVFSVDVTAQQVEEILRALVLDDEIIEVESTGKEEFAS 173
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTP--DGIISPRTCDYYQKWLD 848
VP G++CY KSKGGVRGE+K GAMASIPCGVCPR+ C P DG ISPRTCDY++KWLD
Sbjct: 174 VPKGKICY--KSKGGVRGEKKAGAMASIPCGVCPRIIKCAPDADGFISPRTCDYFEKWLD 231
Query: 849 F 851
F
Sbjct: 232 F 232
>XP_018829908.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia] XP_018829909.1 PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Juglans regia]
XP_018829910.1 PREDICTED: DNA-directed RNA polymerase
III subunit rpc6-like [Juglans regia]
Length = 239
Score = 319 bits (817), Expect = e-105
Identities = 155/239 (64%), Positives = 183/239 (76%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MSR+QG S LKRKR + S SLT+ ER+LY+LI SK+DM IWT DMKRETNLPD
Sbjct: 1 MSRLQGPSLLKRKRPDSNSPSVSLTEHERLLYDLIQSKQDMAIWTRDMKRETNLPDNVVT 60
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEVVNIQNKGRKHY+A EFEPS EITGG WY+EG+LDTEFIN +K C
Sbjct: 61 KSLKSLQTKKLIKEVVNIQNKGRKHYIATEFEPSTEITGGTWYAEGNLDTEFINFLKKHC 120
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
+K I+ QKV T +GVL+ R+S F+ E TTQQ+EEI+ LVLD+EI+EVKS G G+F S
Sbjct: 121 VKIIYEQKVATLEGVLDTIRRSRAFNIEFTTQQVEEIVNVLVLDNEIMEVKSNGIGEFGS 180
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
+PVGRVCY C +KGG +GE K GAMASIPCGVCPR++ CTPDGIISP+TC Y+ KWLDF
Sbjct: 181 IPVGRVCYTCTNKGGNKGEPKIGAMASIPCGVCPRISLCTPDGIISPKTCVYFSKWLDF 239
>XP_004491901.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Cicer
arietinum] XP_004491902.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC6 [Cicer arietinum]
Length = 235
Score = 316 bits (809), Expect = e-104
Identities = 152/239 (63%), Positives = 187/239 (78%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
M+R++ SS +RKRQ+ VS SLT+ E ILYNLI+SKKD+GIWTGDMKRETNLP
Sbjct: 1 MNRLRESSP-QRKRQK---VSPSLTNEESILYNLIYSKKDIGIWTGDMKRETNLPVTVFN 56
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEV IQNKGRKHYMA EFEPSKEITGG+WY++G LDT+FI +KDVC
Sbjct: 57 KTLKELMSKSMIKEVTTIQNKGRKHYMAIEFEPSKEITGGNWYTDGKLDTDFIAALKDVC 116
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
KYI +QKV+T DG LEWS+K+G+F++EVT Q+E+I++TLVLDD I+EV S G+GDFAS
Sbjct: 117 FKYISKQKVSTLDGFLEWSKKNGIFNSEVTPTQVEDIMKTLVLDDAIVEVTSNGYGDFAS 176
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
+PVGRVCYKCKS V+GE K G + IPC CPR+++C+PDG++SPRTC YY KWLDF
Sbjct: 177 IPVGRVCYKCKSNVKVKGELKYGLVPYIPCFACPRISFCSPDGVVSPRTCVYYDKWLDF 235
>XP_018831899.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia] XP_018831900.1 PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Juglans regia]
XP_018831901.1 PREDICTED: DNA-directed RNA polymerase
III subunit rpc6-like [Juglans regia]
Length = 238
Score = 312 bits (800), Expect = e-103
Identities = 153/239 (64%), Positives = 183/239 (76%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MSR+QG S LKRKR + S SLT+ ER+LY+LI SK+DM IWT DMKRETNLPD
Sbjct: 1 MSRLQGPSPLKRKRPDSNTPSGSLTEHERLLYDLIRSKQDMAIWTRDMKRETNLPDNVVT 60
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEVVNIQNKGRKHY+A EFEPS EITGG WY+EG+LDTEFIN +K C
Sbjct: 61 KSLKSLQTKKLIKEVVNIQNKGRKHYIATEFEPSMEITGGTWYAEGNLDTEFINFLKKHC 120
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
+K I+ QKVTT +G+L+ R+S F+ E T+QQ+EEI+ +LVLD+EI+EVKS G G+F S
Sbjct: 121 VKIIYEQKVTTLEGILDTIRRSRAFNVEFTSQQVEEIVNSLVLDNEIMEVKSNGIGEFDS 180
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
+PVGRVCY C SKG GE K GAMASIPCGVCP+++ CTPDGIISP+TC Y+ KWLDF
Sbjct: 181 IPVGRVCYTCASKGN-NGEPKIGAMASIPCGVCPQISLCTPDGIISPKTCVYFTKWLDF 238
>OAY52825.1 hypothetical protein MANES_04G114300 [Manihot esculenta] OAY52826.1
hypothetical protein MANES_04G114300 [Manihot esculenta]
Length = 236
Score = 307 bits (787), Expect = e-101
Identities = 149/239 (62%), Positives = 183/239 (76%)
Frame = +3
Query: 135 MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 314
MSR+ G KRK+ + +ESLT+ ERILYN+I +K+DMGIWT DMKRET+LPD
Sbjct: 1 MSRLLGQ---KRKQTDSKSPAESLTEQERILYNVIRNKQDMGIWTRDMKRETSLPDNVVN 57
Query: 315 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 494
IKEVVNIQNKGRKHYMA EFEPSKEITGG WY EG+LDTEFI ++K+ C
Sbjct: 58 KSLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGTWYVEGNLDTEFIQILKEQC 117
Query: 495 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 674
K I++ KV T +G+ + ++SGV + E+T QQI+EI++ LVLD+EIIE+KS G G+FAS
Sbjct: 118 TKQIYKLKVATLEGITDSIKRSGVLNVELTKQQIDEIVKALVLDNEIIELKSNGMGEFAS 177
Query: 675 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
+PVG++CYKC SKG GE K GAMASIPCGVCPR++ CTPDGIISP+TC YY KWLDF
Sbjct: 178 IPVGKICYKCISKGSGGGEPKIGAMASIPCGVCPRIHQCTPDGIISPQTCVYYNKWLDF 236
>XP_009345829.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Pyrus
x bretschneideri] XP_009345831.1 PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Pyrus x
bretschneideri] XP_009345848.1 PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Pyrus x
bretschneideri] XP_009345849.1 PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Pyrus x
bretschneideri] XP_009345850.1 PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Pyrus x
bretschneideri] XP_018500593.1 PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Pyrus x
bretschneideri]
Length = 231
Score = 304 bits (778), Expect = e-100
Identities = 142/229 (62%), Positives = 176/229 (76%)
Frame = +3
Query: 165 KRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXXXXXXXXXXXX 344
KRK+ + + ++SL+ ERILYN+IHSK+DMGIWT DMK+ETNLPD
Sbjct: 3 KRKQPDSSSPADSLSQNERILYNVIHSKQDMGIWTRDMKKETNLPDKVFNAALKTLQAKK 62
Query: 345 XIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVCLKYIFRQKVT 524
I+EVVN+Q+KGRKHY+A EFEPSKE+TGG WYSEG LD ++INLVKD K I++QKV
Sbjct: 63 LIQEVVNVQSKGRKHYIATEFEPSKELTGGAWYSEGKLDKDYINLVKDQFAKMIYQQKVA 122
Query: 525 TRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFASVPVGRVCYKC 704
T +G+ + RK+ +F E T QQ EEI+R LVLD+ ++EVKSTG G+FAS+ +G+VCYKC
Sbjct: 123 TLEGIADAIRKTKIFKTEFTKQQTEEIVRDLVLDNRVMEVKSTGMGEFASIQIGKVCYKC 182
Query: 705 KSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
K KGG RGE K GAMASIPCGVCPR++ CTPDGIISP TC Y+ KWLDF
Sbjct: 183 KGKGGTRGETKVGAMASIPCGVCPRISQCTPDGIISPSTCVYFAKWLDF 231
>XP_008339509.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Malus
domestica]
Length = 231
Score = 304 bits (778), Expect = e-100
Identities = 142/229 (62%), Positives = 176/229 (76%)
Frame = +3
Query: 165 KRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXXXXXXXXXXXX 344
KRK+ + + ++SL+ ERILYN+IH K+DMGIWT DMK+ETNLPD
Sbjct: 3 KRKQPDSSSPADSLSQNERILYNVIHGKQDMGIWTRDMKKETNLPDKVFNAALKTLQAKK 62
Query: 345 XIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVCLKYIFRQKVT 524
I+EVVN+Q+KGRKHY+A EFEPSKE+TGG WYSEG LD ++INLVKD K I++QKV
Sbjct: 63 LIQEVVNVQSKGRKHYIATEFEPSKELTGGAWYSEGKLDKDYINLVKDQFAKMIYQQKVA 122
Query: 525 TRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFASVPVGRVCYKC 704
T +G+ + RK+ +F E T QQ EEI+R LVLD+ ++EVKSTG G+FAS+ +G+VCYKC
Sbjct: 123 TLEGIADAIRKTKIFKTEFTKQQTEEIVRDLVLDNRVMEVKSTGMGEFASIQIGKVCYKC 182
Query: 705 KSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
KSKGG RGE K GAMASIPCGVCPR++ CTPDGIISP TC Y+ KWLDF
Sbjct: 183 KSKGGTRGETKVGAMASIPCGVCPRISQCTPDGIISPSTCVYFAKWLDF 231
>XP_002297621.2 hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
EEE82426.2 hypothetical protein POPTR_0001s04090g
[Populus trichocarpa]
Length = 291
Score = 305 bits (781), Expect = 2e-99
Identities = 156/272 (57%), Positives = 190/272 (69%)
Frame = +3
Query: 36 RCCFSFLTNAVSLCCFDSPIR**ATPVAILAPGMSRVQGSSSLKRKRQELALVSESLTDG 215
RC FS V C R +L+ GMSRVQG SSLKRKR EL +SLT+
Sbjct: 25 RCLFSSFDLRVPAYCTGCLFR-----FDVLSVGMSRVQGPSSLKRKRPELNSPVQSLTEH 79
Query: 216 ERILYNLIHSKKDMGIWTGDMKRETNLPDXXXXXXXXXXXXXXXIKEVVNIQNKGRKHYM 395
ERILY++I SK+D+GIWT DMK+E LPD IKEVVNIQNKGRKH+M
Sbjct: 80 ERILYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFM 139
Query: 396 AAEFEPSKEITGGDWYSEGSLDTEFINLVKDVCLKYIFRQKVTTRDGVLEWSRKSGVFSA 575
A EFEPSKEI+GG WY EGSLDTEFI ++ +C + I ++ V T + V + F+
Sbjct: 140 ATEFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQIEKKGVATLEEVTDSINSYPAFNV 199
Query: 576 EVTTQQIEEILRTLVLDDEIIEVKSTGFGDFASVPVGRVCYKCKSKGGVRGEQKPGAMAS 755
+VT QQIEEILRTL+LD+ I+EVKS G G+FAS+P G+VCY+ SKG + GE K GA+AS
Sbjct: 200 DVTKQQIEEILRTLILDNAIMEVKSNGMGEFASIPFGKVCYRYISKGALGGEPKAGALAS 259
Query: 756 IPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
IPCGVCPR+++CTPDGIISP+TC YYQKWLDF
Sbjct: 260 IPCGVCPRISHCTPDGIISPKTCVYYQKWLDF 291
>XP_011008461.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Populus euphratica] XP_011008462.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Populus euphratica]
Length = 241
Score = 303 bits (775), Expect = 3e-99
Identities = 154/241 (63%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Frame = +3
Query: 135 MSRVQGSSS-LKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXX 311
MSR QGSSS LKRKR L+ S+SL D ER LY++I SKKDMGIWT DMK+ETNLPD
Sbjct: 1 MSRSQGSSSSLKRKRPGLSSPSQSLIDHERKLYDVIRSKKDMGIWTRDMKKETNLPDNVV 60
Query: 312 XXXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDV 491
IKEVVNIQNKGRKHYMA EF+PSKE+TGG WY GSLDT+FI ++
Sbjct: 61 NKSLKALHAKNLIKEVVNIQNKGRKHYMATEFQPSKELTGGSWYVAGSLDTDFIGSLRMF 120
Query: 492 CLKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFA 671
C+KYI +KV T + V E R +G F+ EVT QQ+EEI+R LVLDDE++EVKS G G+F
Sbjct: 121 CVKYIAEEKVATVEQVTELIRGNGAFAVEVTKQQVEEIVRALVLDDEVMEVKSNGMGEFG 180
Query: 672 SVPVGRVCYKCKSKGGVRGEQKP-GAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLD 848
SVPVG VCYKC KG G + GAMASIPCGVCPR++ CTPDG+ISPRTC YY KWLD
Sbjct: 181 SVPVGNVCYKCVGKGRGGGVKAVIGAMASIPCGVCPRISLCTPDGVISPRTCVYYTKWLD 240
Query: 849 F 851
F
Sbjct: 241 F 241
>XP_011003010.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Populus euphratica]
Length = 258
Score = 303 bits (775), Expect = 5e-99
Identities = 151/246 (61%), Positives = 182/246 (73%), Gaps = 1/246 (0%)
Frame = +3
Query: 117 AILAPG-MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETN 293
A+L PG MSR+QG SSLKRKR E+ ++SL + ER+LY++I SK+D+GIWT DMK+E
Sbjct: 13 AMLKPGGMSRLQGPSSLKRKRPEVNSPAQSLNEHERLLYDVIRSKQDIGIWTRDMKKEAK 72
Query: 294 LPDXXXXXXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFI 473
LPD IKEVVNIQNKGRKH+MA EFEPSKEI+GG WY EGSLDTEFI
Sbjct: 73 LPDNVVNKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFI 132
Query: 474 NLVKDVCLKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKST 653
+K +C + I R V T + V + F+ +VT QQIEEILRTL+LD+ I+EVKS
Sbjct: 133 ESLKQLCKRQIERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSN 192
Query: 654 GFGDFASVPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYY 833
G G+FAS+P G VCYK SKGG+ GE K GA+ASIPCGVCPR++ CTPDGIISP+TC YY
Sbjct: 193 GMGEFASIPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYY 252
Query: 834 QKWLDF 851
QKWLDF
Sbjct: 253 QKWLDF 258
>XP_017182596.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc6-like [Malus domestica]
Length = 302
Score = 304 bits (778), Expect = 8e-99
Identities = 142/229 (62%), Positives = 176/229 (76%)
Frame = +3
Query: 165 KRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXXXXXXXXXXXX 344
KRK+ + + ++SL+ ERILYN+IH K+DMGIWT DMK+ETNLPD
Sbjct: 74 KRKQPDSSSPADSLSQNERILYNVIHGKQDMGIWTRDMKKETNLPDKVFNAALKTLQAKK 133
Query: 345 XIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVCLKYIFRQKVT 524
I+EVVN+Q+KGRKHY+A EFEPSKE+TGG WYSEG LD ++INLVKD K I++QKV
Sbjct: 134 LIQEVVNVQSKGRKHYIATEFEPSKELTGGAWYSEGKLDKDYINLVKDQFAKMIYQQKVA 193
Query: 525 TRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFASVPVGRVCYKC 704
T +G+ + RK+ +F E T QQ EEI+R LVLD+ ++EVKSTG G+FAS+ +G+VCYKC
Sbjct: 194 TLEGIADAIRKTKIFKTEFTKQQTEEIVRDLVLDNRVMEVKSTGMGEFASIQIGKVCYKC 253
Query: 705 KSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
KSKGG RGE K GAMASIPCGVCPR++ CTPDGIISP TC Y+ KWLDF
Sbjct: 254 KSKGGTRGETKVGAMASIPCGVCPRISQCTPDGIISPSTCVYFAKWLDF 302
>XP_002509507.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis] XP_015570361.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC6 [Ricinus communis]
XP_015570404.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC6 [Ricinus communis] EEF50894.1
DNA-directed RNA polymerase III subunit F, putative
[Ricinus communis]
Length = 236
Score = 301 bits (771), Expect = 1e-98
Identities = 143/233 (61%), Positives = 177/233 (75%)
Frame = +3
Query: 153 SSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXXXXXXXX 332
S +LKRK+ E + ++SLT+ E LYN+I SK+DMGIWT DMKRETNLPD
Sbjct: 4 SQALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVL 63
Query: 333 XXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVCLKYIFR 512
IKEVVNIQNKGRKHYMA EFEPSKEITGG WY EG+LDTEFI L+K+VC K + +
Sbjct: 64 QAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLK 123
Query: 513 QKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFASVPVGRV 692
KV T +G+ + ++SG+F+ E+T QQIEEI++ LVLD+ +IEVKS G +F+ +P+G+V
Sbjct: 124 LKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKV 183
Query: 693 CYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 851
CYKC KG GE + GAMASIPCGVCPR++ CTPDGIISP+TC YY KWLDF
Sbjct: 184 CYKCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236