BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00018990
         (287 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_061979180.1 MULTISPECIES: integrase [Bradyrhizobium]               134   9e-36
SCB50362.1 Phage integrase family protein [Rhizobium multihospit...   125   1e-32
BAR63251.1 integrase/recombinase protein (plasmid) [Bradyrhizobi...   117   5e-30
OCX26010.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]         118   5e-30
WP_044414607.1 MULTISPECIES: integrase [Bradyrhizobiaceae] KIZ39...   118   6e-30
WP_024584968.1 integrase [Bradyrhizobium sp. OHSU_III]                118   6e-30
ABE65096.1 phage integrase (plasmid) [Nitrobacter hamburgensis X14]   119   7e-30
WP_015822435.1 integrase [Methylobacterium extorquens] CAX24244....   118   9e-30
SDF01826.1 Site-specific recombinase XerD [Bradyrhizobium sp. R5]     117   2e-29
WP_034462703.1 integrase [Afipia sp. P52-10] ETR79462.1 integras...   117   2e-29
OCX25925.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]         117   2e-29
WP_043855073.1 integrase [Bradyrhizobium elkanii] KIU52644.1 int...   117   2e-29
WP_002719015.1 hypothetical protein [Afipia felis] EKS26839.1 hy...   115   1e-28
WP_036045106.1 integrase [Bradyrhizobium yuanmingense]                115   1e-28
WP_024584213.1 integrase [Bradyrhizobium sp. OHSU_III]                114   2e-28
WP_057193706.1 integrase [Bosea sp. Root483D1] KRE11657.1 integr...   114   3e-28
WP_019200229.1 MULTISPECIES: integrase [Bradyrhizobiaceae]            113   5e-28
WP_012564771.1 integrase [Oligotropha carboxidovorans] ACI94747....   113   5e-28
ERF82250.1 FdhD protein [Bradyrhizobium sp. DFCI-1]                   113   5e-28
WP_054207051.1 integrase [Bosea vaviloviae] KPH83193.1 integrase...   112   9e-28

>WP_061979180.1 MULTISPECIES: integrase [Bradyrhizobium]
          Length = 389

 Score =  134 bits (336), Expect = 9e-36
 Identities = 70/95 (73%), Positives = 70/95 (73%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPT                       
Sbjct: 126 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTVRSAVRLAVRASPRPRRRKSRRA 185

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RDILDRLLATCQTDRLADTRDLAILLLAFASGG
Sbjct: 186 VTRDILDRLLATCQTDRLADTRDLAILLLAFASGG 220


>SCB50362.1 Phage integrase family protein [Rhizobium multihospitium]
          Length = 389

 Score =  125 bits (314), Expect = 1e-32
 Identities = 64/95 (67%), Positives = 67/95 (70%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRTDGPHAP+TV+RRLASWSTLHRWKGMEGPFGAPT                       
Sbjct: 126 LLRTDGPHAPNTVKRRLASWSTLHRWKGMEGPFGAPTVRAAVRLAVRATPRPRRRKSKRA 185

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RDILDRLL TC TDRL DTRD+AILLLAFASGG
Sbjct: 186 VTRDILDRLLMTCSTDRLVDTRDIAILLLAFASGG 220


>BAR63251.1 integrase/recombinase protein (plasmid) [Bradyrhizobium
           diazoefficiens]
          Length = 335

 Score =  117 bits (294), Expect = 5e-30
 Identities = 59/95 (62%), Positives = 66/95 (69%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           +LR+DGPHAPSTV+RRLASW TLHRWKG EGPF +P+                       
Sbjct: 72  MLRSDGPHAPSTVKRRLASWGTLHRWKGQEGPFASPSLRSALRLAVRASTRPRQRKSKRA 131

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC +DRLADTRDLAILLLAFASGG
Sbjct: 132 VTRDVLDRLLATCASDRLADTRDLAILLLAFASGG 166


>OCX26010.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]
          Length = 376

 Score =  118 bits (296), Expect = 5e-30
 Identities = 60/95 (63%), Positives = 66/95 (69%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRTDGPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTDGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRL DTRDLAILLLAFASGG
Sbjct: 187 MTRDVLDRLLATCRSDRLVDTRDLAILLLAFASGG 221


>WP_044414607.1 MULTISPECIES: integrase [Bradyrhizobiaceae] KIZ39782.1 integrase
           [Rhodopseudomonas palustris] KQW18148.1 integrase
           [Afipia sp. Root123D2]
          Length = 390

 Score =  118 bits (296), Expect = 6e-30
 Identities = 60/95 (63%), Positives = 66/95 (69%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRTDGPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTDGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRL DTRDLAILLLAFASGG
Sbjct: 187 VTRDVLDRLLATCRSDRLVDTRDLAILLLAFASGG 221


>WP_024584968.1 integrase [Bradyrhizobium sp. OHSU_III]
          Length = 390

 Score =  118 bits (296), Expect = 6e-30
 Identities = 60/95 (63%), Positives = 66/95 (69%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRTDGPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTDGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRL DTRDLAILLLAFASGG
Sbjct: 187 MTRDVLDRLLATCRSDRLVDTRDLAILLLAFASGG 221


>ABE65096.1 phage integrase (plasmid) [Nitrobacter hamburgensis X14]
          Length = 422

 Score =  119 bits (297), Expect = 7e-30
 Identities = 60/95 (63%), Positives = 67/95 (70%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRTDGPHAPSTV+RRLA+W TLHRWKG EGPF +P+                       
Sbjct: 127 LLRTDGPHAPSTVKRRLANWGTLHRWKGQEGPFHSPSLRTALRLAVRASSRPRQRKSMRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRLADTRDLAILLLAFASGG
Sbjct: 187 VTRDVLDRLLATCRSDRLADTRDLAILLLAFASGG 221


>WP_015822435.1 integrase [Methylobacterium extorquens] CAX24244.1
           integrase/recombinase protein [Methylobacterium
           extorquens DM4]
          Length = 390

 Score =  118 bits (295), Expect = 9e-30
 Identities = 60/95 (63%), Positives = 66/95 (69%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRT+GPHAPSTV+RRLASW TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTEGPHAPSTVKRRLASWGTLHRWKGQEGPFHAPSLRTALRLAVRASVRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRL DTRDLAILLLAFASGG
Sbjct: 187 VTRDVLDRLLATCRSDRLVDTRDLAILLLAFASGG 221


>SDF01826.1 Site-specific recombinase XerD [Bradyrhizobium sp. R5]
          Length = 409

 Score =  117 bits (294), Expect = 2e-29
 Identities = 59/95 (62%), Positives = 68/95 (71%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           +LR+DGPHAPSTV+RRLA+W+TLHRWKG+EGPF AP                        
Sbjct: 127 ILRSDGPHAPSTVKRRLANWATLHRWKGLEGPFHAPGLRAAIRLAVRASGRPRRRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRLADTRDLAILLLAFASGG
Sbjct: 187 ITRDVLDRLLATCRSDRLADTRDLAILLLAFASGG 221


>WP_034462703.1 integrase [Afipia sp. P52-10] ETR79462.1 integrase [Afipia sp.
           P52-10]
          Length = 389

 Score =  117 bits (293), Expect = 2e-29
 Identities = 60/95 (63%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLR+ GPHAPSTV+RRLASW TLHRWKG+EGPFG+P                        
Sbjct: 126 LLRSAGPHAPSTVKRRLASWGTLHRWKGIEGPFGSPAVRSAVRLAVRASPRPRRRKSKRA 185

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRL ATC TDRLADTRDLAILLLAFASGG
Sbjct: 186 VTRDVLDRLAATCATDRLADTRDLAILLLAFASGG 220


>OCX25925.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]
          Length = 390

 Score =  117 bits (292), Expect = 2e-29
 Identities = 59/95 (62%), Positives = 66/95 (69%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRTDGPHAPSTV+RR+A+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTDGPHAPSTVKRRMANWGTLHRWKGEEGPFRAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRL DTRDLAILLLAFASGG
Sbjct: 187 VTRDVLDRLLATCRSDRLVDTRDLAILLLAFASGG 221


>WP_043855073.1 integrase [Bradyrhizobium elkanii] KIU52644.1 integrase
           [Bradyrhizobium elkanii]
          Length = 390

 Score =  117 bits (292), Expect = 2e-29
 Identities = 59/95 (62%), Positives = 66/95 (69%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRT+GPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTEGPHAPSTVKRRLANWGTLHRWKGQEGPFQAPSLRTAVRLAVRASTRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRL DTRDLAILLLAFASGG
Sbjct: 187 VTRDVLDRLLATCRSDRLVDTRDLAILLLAFASGG 221


>WP_002719015.1 hypothetical protein [Afipia felis] EKS26839.1 hypothetical protein
           HMPREF9697_03955 [Afipia felis ATCC 53690]
          Length = 393

 Score =  115 bits (288), Expect = 1e-28
 Identities = 59/95 (62%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRT+GPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTEGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC +DRL DTRDLAILLLAFASGG
Sbjct: 187 VTRDVLDRLLATCCSDRLVDTRDLAILLLAFASGG 221


>WP_036045106.1 integrase [Bradyrhizobium yuanmingense]
          Length = 390

 Score =  115 bits (287), Expect = 1e-28
 Identities = 58/95 (61%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           +LR+DGPHAPSTV+RRLASW TLHRWKG EGPF +P+                       
Sbjct: 127 MLRSDGPHAPSTVKRRLASWGTLHRWKGQEGPFASPSLRSALQLAVRASTRPRRRKSSRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC + RLADTRDLAILLLAFASGG
Sbjct: 187 VTRDVLDRLLATCASGRLADTRDLAILLLAFASGG 221


>WP_024584213.1 integrase [Bradyrhizobium sp. OHSU_III]
          Length = 390

 Score =  114 bits (286), Expect = 2e-28
 Identities = 59/95 (62%), Positives = 66/95 (69%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLR+ GPHAPSTV+RRLASW TLHRWKG EGPF AP+                       
Sbjct: 127 LLRSAGPHAPSTVKRRLASWGTLHRWKGQEGPFHAPSLRTAVGLAVRANTRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             R++LDRLLATC++DRLADTRDLAILLLAFASGG
Sbjct: 187 VTRNVLDRLLATCRSDRLADTRDLAILLLAFASGG 221


>WP_057193706.1 integrase [Bosea sp. Root483D1] KRE11657.1 integrase [Bosea sp.
           Root483D1]
          Length = 388

 Score =  114 bits (284), Expect = 3e-28
 Identities = 57/94 (60%), Positives = 64/94 (68%)
 Frame = -3

Query: 282 LRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXXX 103
           LR++GPHAPSTV+RRLA W+TLHRWKG+E P G P                         
Sbjct: 126 LRSEGPHAPSTVKRRLAHWATLHRWKGLESPLGTPAIRTSMRLAVRASAKPRRRKSKRAV 185

Query: 102 XRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
            RDILDRL+ATCQTDRLADTRDLAILL+AFASGG
Sbjct: 186 TRDILDRLIATCQTDRLADTRDLAILLVAFASGG 219


>WP_019200229.1 MULTISPECIES: integrase [Bradyrhizobiaceae]
          Length = 389

 Score =  113 bits (283), Expect = 5e-28
 Identities = 58/95 (61%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLR++GPHAP+TV+RRLASW TLHRWKGMEG FG+P                        
Sbjct: 126 LLRSEGPHAPNTVKRRLASWGTLHRWKGMEGSFGSPGVRSAVRLSVRASPRPRRRKSKRA 185

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RDILD+L ATC TDRLADTRDLAILL+AFASGG
Sbjct: 186 VTRDILDKLAATCATDRLADTRDLAILLVAFASGG 220


>WP_012564771.1 integrase [Oligotropha carboxidovorans] ACI94747.1 phage integrase
           [Oligotropha carboxidovorans OM5] AEI04734.1 phage
           integrase (plasmid) [Oligotropha carboxidovorans OM4]
           AEI08363.1 phage integrase (plasmid) [Oligotropha
           carboxidovorans OM5]
          Length = 390

 Score =  113 bits (283), Expect = 5e-28
 Identities = 57/95 (60%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           LLRT GPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTIGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DR+ DTRDLAILL+AFASGG
Sbjct: 187 VTRDVLDRLLATCRSDRIVDTRDLAILLMAFASGG 221


>ERF82250.1 FdhD protein [Bradyrhizobium sp. DFCI-1]
          Length = 390

 Score =  113 bits (283), Expect = 5e-28
 Identities = 57/95 (60%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 106
           +LR+ GPHAPSTV+RRLASW TLHRWKG EGPF +P+                       
Sbjct: 127 MLRSAGPHAPSTVKRRLASWGTLHRWKGQEGPFASPSLRAALRLAVRASTRPRQRKSKRA 186

Query: 105 XXRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
             RD+LDRLLATC++DRLAD RDLAILLLAFASGG
Sbjct: 187 FTRDVLDRLLATCRSDRLADARDLAILLLAFASGG 221


>WP_054207051.1 integrase [Bosea vaviloviae] KPH83193.1 integrase [Bosea
           vaviloviae]
          Length = 387

 Score =  112 bits (281), Expect = 9e-28
 Identities = 57/94 (60%), Positives = 64/94 (68%)
 Frame = -3

Query: 282 LRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXXX 103
           LR+DGPHA STV+RRLA W+TLHRWKG+E P G PT                        
Sbjct: 125 LRSDGPHASSTVKRRLAHWATLHRWKGLESPLGTPTIRTSVRLAVRASAKPRRRKSKRAV 184

Query: 102 XRDILDRLLATCQTDRLADTRDLAILLLAFASGG 1
            RDILDRL+ATCQ+DRLADTRDLAILL+AFASGG
Sbjct: 185 TRDILDRLIATCQSDRLADTRDLAILLVAFASGG 218