BLASTX nr result
ID: Glycyrrhiza32_contig00017199
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00017199
(1572 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 991 0.0
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 982 0.0
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 897 0.0
YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.... 875 0.0
YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC1003... 874 0.0
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 844 0.0
AHY33059.1 RNA polymerase beta' subunit (chloroplast) [Indigofer... 841 0.0
AIJ28040.1 RNA polymerase beta' subunit (chloroplast) [Trifolium... 838 0.0
YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medic... 834 0.0
YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medi... 834 0.0
AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago... 830 0.0
XP_003606032.1 DNA-directed RNA polymerase subunit beta [Medicag... 830 0.0
AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 830 0.0
AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 830 0.0
YP_001381726.2 RNA polymerase beta' subunit [Medicago truncatula] 830 0.0
AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 829 0.0
AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 829 0.0
YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 828 0.0
YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 828 0.0
AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis la... 825 0.0
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 991 bits (2561), Expect = 0.0
Identities = 499/523 (95%), Positives = 501/523 (95%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLL+SNDQV
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLVSNDQV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQ 1212
KHKLLSFNTFGTKESRIT+YSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQ
Sbjct: 521 KHKLLSFNTFGTKESRITNYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQ 580
Query: 1211 SIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK 1032
SIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK
Sbjct: 581 SIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK 640
Query: 1031 EDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSR 852
EDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSR
Sbjct: 641 EDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSR 700
Query: 851 VGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKNWI 672
VGGLVR IFSGDIHFPGEMDKISRHSAILIPPGTV KNWI
Sbjct: 701 VGGLVRLEKKKKKIELKIFSGDIHFPGEMDKISRHSAILIPPGTVKKKNRKQSKKMKNWI 760
Query: 671 YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS 492
YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS
Sbjct: 761 YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS 820
Query: 491 IRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHTSY 312
IRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHTSY
Sbjct: 821 IRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHTSY 880
Query: 311 IRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQSLI 132
IRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQSLI
Sbjct: 881 IRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQSLI 940
Query: 131 ILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
ILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP
Sbjct: 941 ILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 983
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 982 bits (2538), Expect = 0.0
Identities = 494/523 (94%), Positives = 498/523 (95%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCRY AIDFLLRRDQDQINIHSLSTGKRNISNLL+SNDQV
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRYGAIDFLLRRDQDQINIHSLSTGKRNISNLLVSNDQV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQ 1212
KHKLLSFNTFGTKESRITDYSIFNQI DHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQ
Sbjct: 521 KHKLLSFNTFGTKESRITDYSIFNQIMDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQ 580
Query: 1211 SIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK 1032
SIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK
Sbjct: 581 SIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK 640
Query: 1031 EDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSR 852
EDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSR
Sbjct: 641 EDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSR 700
Query: 851 VGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKNWI 672
VGGLVR IFSGDIHFPGEMDKISRHSAILIPPGTV KNWI
Sbjct: 701 VGGLVRLEKKKKKIELKIFSGDIHFPGEMDKISRHSAILIPPGTVKKKNRKQSKKMKNWI 760
Query: 671 YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS 492
YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS
Sbjct: 761 YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS 820
Query: 491 IRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHTSY 312
IRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHTSY
Sbjct: 821 IRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHTSY 880
Query: 311 IRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQSLI 132
IRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIR+LLNRNKEC+SLI
Sbjct: 881 IRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRILLNRNKECRSLI 940
Query: 131 ILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
ILSSSNCFQTR FNNVKYHNEIKKGINKFKKDP+IPIQNSLGP
Sbjct: 941 ILSSSNCFQTRPFNNVKYHNEIKKGINKFKKDPLIPIQNSLGP 983
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 897 bits (2318), Expect = 0.0
Identities = 459/525 (87%), Positives = 472/525 (89%), Gaps = 2/525 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR DAI FLLR+DQDQI+IHSLSTGKRNISN L+SNDQV
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRSDAIHFLLRKDQDQIHIHSLSTGKRNISNPLVSNDQV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
KHKL SFNTFGTKE ITDYSIFN+I DHCH MYPAIFHDT LLAKRRRNRF+IPFP
Sbjct: 521 KHKLFSFNTFGTKERGITDYSIFNKIICTDHCHLMYPAIFHDTFSLLAKRRRNRFLIPFP 580
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
Q IQERKNELM PSGVSIEIPINGIF RNSIFAYFDDPQYRRQSSGITKYRTIGI+SIF
Sbjct: 581 FQPIQERKNELMPPSGVSIEIPINGIFQRNSIFAYFDDPQYRRQSSGITKYRTIGINSIF 640
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIR
Sbjct: 641 QKEDLIEYRGIKELKPKSQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIR 700
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR IFSG+IHFPGEMDKISRHSAILIPPGTV N
Sbjct: 701 SRVGGLVRLEKKKKKMELKIFSGNIHFPGEMDKISRHSAILIPPGTVKKKWKESKKMN-N 759
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
W YVQWIATTKKKYFVLVRPVILYEIPDSI+FVKLFPQDLFQERDNLELKVLNYILYGNG
Sbjct: 760 WTYVQWIATTKKKYFVLVRPVILYEIPDSIHFVKLFPQDLFQERDNLELKVLNYILYGNG 819
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT
Sbjct: 820 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 879
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
SYIRKR D SG G ISDNESDRININPF SIHSKAKIQQS SQN GTIRMLLNRNKEC+S
Sbjct: 880 SYIRKRNDSSGLGCISDNESDRININPFLSIHSKAKIQQSRSQNQGTIRMLLNRNKECRS 939
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
LIILSSSNCFQ R FNNVKYHN I+KGINKFKKD IIPI+NSLGP
Sbjct: 940 LIILSSSNCFQMRPFNNVKYHNGIRKGINKFKKDSIIPIKNSLGP 984
>YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.1 RpoC2
(chloroplast) [Wisteria sinensis]
Length = 1367
Score = 875 bits (2261), Expect = 0.0
Identities = 455/523 (86%), Positives = 463/523 (88%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR DAI FLL +DQDQ NIHS GKRNISNLL+SNDQV
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRSDAISFLLCKDQDQSNIHS--PGKRNISNLLVSNDQV 518
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQ 1212
K KL SFNTFGTKE RITDYSIFNQI SDLLAKRRRNRFIIPFP Q
Sbjct: 519 KQKLWSFNTFGTKERRITDYSIFNQII-------------CSDLLAKRRRNRFIIPFPFQ 565
Query: 1211 SIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK 1032
SIQERKNE M PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK
Sbjct: 566 SIQERKNERMPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK 625
Query: 1031 EDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSR 852
EDLIEYRGIKELKPK Q KVDRFFFIPEEVHILPESSSIMVRNNSI+GI TPITLNIRSR
Sbjct: 626 EDLIEYRGIKELKPKYQNKVDRFFFIPEEVHILPESSSIMVRNNSIVGIGTPITLNIRSR 685
Query: 851 VGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKNWI 672
VGGLVR IFSGDIHFPGEMDKISRHSAILIPPGTV KNWI
Sbjct: 686 VGGLVRLEKKKKKIELKIFSGDIHFPGEMDKISRHSAILIPPGTVKKKNWKESKKTKNWI 745
Query: 671 YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS 492
YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS
Sbjct: 746 YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS 805
Query: 491 IRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHTSY 312
I+GISDTRIQLVRTCLVLNW+QDKKSSSI EALASFVEVSTNGLIEYFLRIDLVKSHTSY
Sbjct: 806 IQGISDTRIQLVRTCLVLNWNQDKKSSSIAEALASFVEVSTNGLIEYFLRIDLVKSHTSY 865
Query: 311 IRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQSLI 132
IRKR DPSGSGLISDNESD+ININPFYSIHS AKIQQSLSQNHGTIRMLLNRNKEC+SLI
Sbjct: 866 IRKRNDPSGSGLISDNESDQININPFYSIHSTAKIQQSLSQNHGTIRMLLNRNKECRSLI 925
Query: 131 ILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
ILSSSNCFQ R FNNVKYHN IKKGINKFKKDPII I+NSLGP
Sbjct: 926 ILSSSNCFQMRPFNNVKYHNGIKKGINKFKKDPIISIKNSLGP 968
>YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC10039.1 RpoC2
(chloroplast) [Wisteria floribunda]
Length = 1367
Score = 874 bits (2258), Expect = 0.0
Identities = 454/523 (86%), Positives = 463/523 (88%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR DAI FLL +DQDQ NIHS GKRNISNLL+SNDQV
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRSDAISFLLCKDQDQSNIHS--PGKRNISNLLVSNDQV 518
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQ 1212
K KL SFNTFGTKE RITDYSIFNQI SDLLAKRRRNRFIIPFP Q
Sbjct: 519 KQKLWSFNTFGTKERRITDYSIFNQII-------------CSDLLAKRRRNRFIIPFPFQ 565
Query: 1211 SIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK 1032
SIQERKNE M PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK
Sbjct: 566 SIQERKNERMPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQK 625
Query: 1031 EDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSR 852
EDLIEYRGIKELKPK Q KVDRFFFIPEEVHILPESSSIMVRNNSI+GI TPITLNIRSR
Sbjct: 626 EDLIEYRGIKELKPKYQNKVDRFFFIPEEVHILPESSSIMVRNNSIVGIGTPITLNIRSR 685
Query: 851 VGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKNWI 672
VGGLVR IFSGDIHFPGEMDKISRHSAILIPPGTV KNWI
Sbjct: 686 VGGLVRLEKKKKKIELKIFSGDIHFPGEMDKISRHSAILIPPGTVKKKIWKESKKTKNWI 745
Query: 671 YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS 492
YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS
Sbjct: 746 YVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNGKS 805
Query: 491 IRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHTSY 312
I+GISDTRIQLVRTCLVLNW+QDKKSSSI EALASFVEVSTNGLIEYFLRIDLVKSHTSY
Sbjct: 806 IQGISDTRIQLVRTCLVLNWNQDKKSSSIAEALASFVEVSTNGLIEYFLRIDLVKSHTSY 865
Query: 311 IRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQSLI 132
IRKR DPSGSGLISDNE+D+ININPFYSIHS AKIQQSLSQNHGTIRMLLNRNKEC+SLI
Sbjct: 866 IRKRNDPSGSGLISDNETDQININPFYSIHSTAKIQQSLSQNHGTIRMLLNRNKECRSLI 925
Query: 131 ILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
ILSSSNCFQ R FNNVKYHN IKKGINKFKKDPII I+NSLGP
Sbjct: 926 ILSSSNCFQMRPFNNVKYHNGIKKGINKFKKDPIISIKNSLGP 968
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 844 bits (2181), Expect = 0.0
Identities = 437/527 (82%), Positives = 458/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQI+I SLS GK NISNLL+SNDQV
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHIESLSNGKINISNLLVSNDQV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
KHKLLSF TFGTKE I++YSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPFP
Sbjct: 521 KHKLLSFKTFGTKEKGISNYSILNQMICMDHSHLMYPAIFHDTFYLLAKRRRNRFLIPFP 580
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
SIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRTIGI SIF
Sbjct: 581 FHSIQERKNELMPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTIGIQSIF 640
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 641 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 700
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR IFSG+IHFPGEMDKISRHS+ILIPPGTV N
Sbjct: 701 SRVGGLVRLEKKKKKIELKIFSGNIHFPGEMDKISRHSSILIPPGTVKKKKWKESKKINN 760
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWIATTKKKYFVLVRPVILYEIPDSI+F KLFP+DLFQERDNLELKV+NYILYGNG
Sbjct: 761 WIYVQWIATTKKKYFVLVRPVILYEIPDSIHFGKLFPKDLFQERDNLELKVVNYILYGNG 820
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKSSSIEEA ASFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 821 KSIRGISDTRIQLVRTCLVLNWDQAKKSSSIEEAPASFVEVSTNGLIEYFLRIDLVKSNT 880
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
SYIRKR DPSG GLI+DNESD ININPF+SIHSKAKIQQSLSQNHGTIRMLLNRNKE +S
Sbjct: 881 SYIRKRNDPSGLGLIADNESDPININPFFSIHSKAKIQQSLSQNHGTIRMLLNRNKEYRS 940
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ R FNNVK+HN I KK+PIIPI NSLGP
Sbjct: 941 WIILSSSNCFQMRPFNNVKFHNGI-------KKNPIIPINNNNSLGP 980
>AHY33059.1 RNA polymerase beta' subunit (chloroplast) [Indigofera tinctoria]
Length = 1376
Score = 841 bits (2173), Expect = 0.0
Identities = 432/526 (82%), Positives = 456/526 (86%), Gaps = 4/526 (0%)
Frame = -2
Query: 1568 YSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQVK 1389
YSNVHILPKTSHLWILSG+SCR A+ F LR+DQDQ+NIHSLSTG+RNISN L+SNDQV+
Sbjct: 462 YSNVHILPKTSHLWILSGRSCRSGAVSFSLRKDQDQMNIHSLSTGERNISNPLVSNDQVR 521
Query: 1388 HKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPL 1215
HK SFN G KE RI DYS+FNQI DHCHF++PAIFHDTSDLLAKRRRNRFIIPFP
Sbjct: 522 HKFFSFNPSGKKERRIPDYSVFNQILCMDHCHFIHPAIFHDTSDLLAKRRRNRFIIPFPF 581
Query: 1214 QSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQ 1035
QSIQER ELM PSG+SIEIPINGIF RNSI AYFDDPQYR QSSGITKYRTIGIHSI +
Sbjct: 582 QSIQERDKELMFPSGISIEIPINGIFRRNSILAYFDDPQYRTQSSGITKYRTIGIHSILK 641
Query: 1034 KED-LIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
KED LIEYRG+KE KPK QIKVDRFFFIPEEVHILPESSSIMVRNNSI+G+DTPITLNIR
Sbjct: 642 KEDFLIEYRGVKEFKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSIVGVDTPITLNIR 701
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGT-VXXXXXXXXXXXK 681
SRVGGLVR IFSG+I+FPGEMDKISRHSAILIPPGT V K
Sbjct: 702 SRVGGLVRVEKKKKRIELKIFSGNIYFPGEMDKISRHSAILIPPGTTVKKKNSKESKKKK 761
Query: 680 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 501
NWIYVQWI TTKKKYFVLVRPVILYEI D IN VKLFPQDLFQERDNLELKV+NYILYGN
Sbjct: 762 NWIYVQWITTTKKKYFVLVRPVILYEIADGINLVKLFPQDLFQERDNLELKVINYILYGN 821
Query: 500 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 321
GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEA ASFVEVSTNGLI FLRIDLVKSH
Sbjct: 822 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEARASFVEVSTNGLIGDFLRIDLVKSH 881
Query: 320 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 141
SY RKR D SGSGLISDNES NINPFYSI+SKAKIQQSLSQNHGTIRMLLNRNKEC+
Sbjct: 882 ISYFRKRNDLSGSGLISDNESHPTNINPFYSIYSKAKIQQSLSQNHGTIRMLLNRNKECR 941
Query: 140 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
SLIILSS NCFQ FN+ KYHN IK+GINK K+DPIIPI+NSLGP
Sbjct: 942 SLIILSSYNCFQMGLFNDGKYHNGIKEGINKLKRDPIIPIKNSLGP 987
>AIJ28040.1 RNA polymerase beta' subunit (chloroplast) [Trifolium lupinaster]
Length = 1367
Score = 838 bits (2166), Expect = 0.0
Identities = 434/527 (82%), Positives = 455/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQI+I SLS GKRN S L +S+D V
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHIDSLSNGKRNTSTLFVSDDHV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
KHK SF TFGTKE I+DYS+FNQ DH H MYPAIFHD +LLAKRRRNRF+IPFP
Sbjct: 521 KHKFFSFKTFGTKEKGISDYSLFNQTICTDHSHLMYPAIFHDIFNLLAKRRRNRFLIPFP 580
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSI
Sbjct: 581 FQSIQERKNELMPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIL 640
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 641 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 700
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGL+R IFSG+IHFPGE+DKISRHSAILIPPGTV N
Sbjct: 701 SRVGGLLRLEKKKKKIELKIFSGNIHFPGEVDKISRHSAILIPPGTVKKKRKESKKIN-N 759
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWIATTKKKYFVLVRPVILYEIPDSI+FVKLFPQDLFQERDNLELKV+NYILYGNG
Sbjct: 760 WIYVQWIATTKKKYFVLVRPVILYEIPDSIHFVKLFPQDLFQERDNLELKVVNYILYGNG 819
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKSSSIEEA ASFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 820 KSIRGISDTRIQLVRTCLVLNWDQVKKSSSIEEAPASFVEVSTNGLIEYFLRIDLVKSNT 879
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
SYIRKR DPSG GLI+DNE D ININPF+SIHSKAKIQQS+SQNHGTIRMLLNRNKE +S
Sbjct: 880 SYIRKRNDPSGLGLIADNELDGININPFFSIHSKAKIQQSISQNHGTIRMLLNRNKESRS 939
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ RSFNNVKYHN I KKDP IPI +NSLGP
Sbjct: 940 WIILSSSNCFQMRSFNNVKYHNGI-------KKDPRIPINNKNSLGP 979
>YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medicago hybrida]
YP_009141687.1 RNA polymerase beta' subunit (chloroplast)
[Medicago papillosa] AIL56137.1 RNA polymerase beta'
subunit (chloroplast) [Medicago hybrida] AIL56212.1 RNA
polymerase beta' subunit (chloroplast) [Medicago
papillosa] AMC32363.1 RNA polymerase beta'' subunit
(chloroplast) [Medicago sativa] ANS57907.1 RNA polymerase
beta' subunit (chloroplast) [Medicago sativa]
Length = 1370
Score = 834 bits (2154), Expect = 0.0
Identities = 434/527 (82%), Positives = 458/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
+YSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQINI SLSTGKRNISNLL+SND+V
Sbjct: 461 LYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQINIDSLSTGKRNISNLLVSNDEV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K KLLS TFGTKE I++YSIFNQI DH H M PAIFHDT LLAKRRRNRF+IPF
Sbjct: 521 KRKLLSLKTFGTKEKGISNYSIFNQIICTDHSHLMDPAIFHDTFYLLAKRRRNRFLIPF- 579
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQE KNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRTIGIHS+F
Sbjct: 580 -QSIQEGKNELMRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTIGIHSVF 638
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 639 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 698
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR IFSG+IHFPGE DKISRHS+ILIPPGTV N
Sbjct: 699 SRVGGLVRLEKKKKKIELKIFSGNIHFPGERDKISRHSSILIPPGTVKKKWKESKKIH-N 757
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWI TTKKKYFVLVRPVILYEIPDSI+FVKLFPQDLFQERDNLELKV+NYILYGNG
Sbjct: 758 WIYVQWITTTKKKYFVLVRPVILYEIPDSIDFVKLFPQDLFQERDNLELKVVNYILYGNG 817
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKS+SIEEA +SFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 818 KSIRGISDTRIQLVRTCLVLNWDQGKKSTSIEEAPSSFVEVSTNGLIEYFLRIDLVKSNT 877
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
SYIRKR DPSG GLI+DNESDRININPF+SIHSKAKI++SLSQNHGTIRMLLNRNKEC+S
Sbjct: 878 SYIRKRNDPSGLGLIADNESDRININPFFSIHSKAKIKKSLSQNHGTIRMLLNRNKECRS 937
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGP
Sbjct: 938 WIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGP 977
>YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medicago falcata]
AOG66214.1 RNA polymerase beta'' subunit (chloroplast)
[Medicago sativa] APC60490.1 RNA polymerase beta''
subunit (chloroplast) [Medicago falcata]
Length = 1374
Score = 834 bits (2154), Expect = 0.0
Identities = 433/527 (82%), Positives = 459/527 (87%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
+YSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQINI SLSTGKRNISNLL+SND+V
Sbjct: 465 LYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQINIDSLSTGKRNISNLLVSNDEV 524
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K KLLS TFGTKE I++YSIFNQI DH H M PAIFHDT LLAKRRRNRF+IPF
Sbjct: 525 KRKLLSLKTFGTKEKGISNYSIFNQIICTDHSHLMDPAIFHDTFYLLAKRRRNRFLIPF- 583
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRTIGIHS+F
Sbjct: 584 -QSIQERKNELMRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTIGIHSVF 642
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 643 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 702
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR IFSG+IHFPGE DKISRHS+ILIPPGTV N
Sbjct: 703 SRVGGLVRLEKKKKKIELKIFSGNIHFPGERDKISRHSSILIPPGTVKKKWKESKKIN-N 761
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWI T+KKKYFVLVRPVILYEIPDSI+FVKLFPQDLFQERDNLELKV+NYILYGNG
Sbjct: 762 WIYVQWITTSKKKYFVLVRPVILYEIPDSIDFVKLFPQDLFQERDNLELKVVNYILYGNG 821
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKS+SIEEA +SFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 822 KSIRGISDTRIQLVRTCLVLNWDQGKKSTSIEEAPSSFVEVSTNGLIEYFLRIDLVKSNT 881
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
SYIRKR DPSG GLI+DNESDRININPF+SIHSKAK+++SLSQNHGTIRMLLNRNKEC+S
Sbjct: 882 SYIRKRNDPSGLGLIADNESDRININPFFSIHSKAKMKKSLSQNHGTIRMLLNRNKECRS 941
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGP
Sbjct: 942 WIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGP 981
>AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 1370
Score = 830 bits (2145), Expect = 0.0
Identities = 431/527 (81%), Positives = 457/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
+YSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQINI SLSTGKRNISNLL+SND+V
Sbjct: 461 LYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQINIDSLSTGKRNISNLLVSNDEV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K KLLS TFGTKE I++YSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF
Sbjct: 521 KLKLLSLKTFGTKEKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF- 579
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRTIGIHS+F
Sbjct: 580 -QSIQERKNELMRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTIGIHSVF 638
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 639 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 698
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR +FSG+IHFPGE DKISRHS+ILIPPGTV N
Sbjct: 699 SRVGGLVRLEKKKKKIELKLFSGNIHFPGERDKISRHSSILIPPGTVKKKRKESKKIN-N 757
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWIATTKKKYFVLVRPVILYEIPDSI+F KLFPQDLFQERDNLELKV+NYILYGNG
Sbjct: 758 WIYVQWIATTKKKYFVLVRPVILYEIPDSIDFRKLFPQDLFQERDNLELKVVNYILYGNG 817
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 818 KSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSNT 877
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
+YIRKR DPSG GLI+DNESDRININPF+SIH KAKI++SLSQNHGTIRMLLNRNKEC+S
Sbjct: 878 AYIRKRNDPSGLGLIADNESDRININPFFSIHYKAKIKKSLSQNHGTIRMLLNRNKECRS 937
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGP
Sbjct: 938 WIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGP 977
>XP_003606032.1 DNA-directed RNA polymerase subunit beta [Medicago truncatula]
AES88229.1 DNA-directed RNA polymerase subunit beta
[Medicago truncatula]
Length = 1368
Score = 830 bits (2144), Expect = 0.0
Identities = 429/527 (81%), Positives = 457/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
+YSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQINI SLSTGKRNISNLL+SND+V
Sbjct: 465 LYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQINIDSLSTGKRNISNLLVSNDEV 524
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K KLLS TFGTKE I++YSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF
Sbjct: 525 KLKLLSLKTFGTKEKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF- 583
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNELM P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRT+GIHS+F
Sbjct: 584 -QSIQERKNELMRPFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTVGIHSVF 642
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 643 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 702
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR +FSG+IHFPGE DKISRHS+ILIPPGTV N
Sbjct: 703 SRVGGLVRLEKKKKKIELKLFSGNIHFPGERDKISRHSSILIPPGTVKKKRKESKKIN-N 761
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWIATTKKKYFVLVRPVILYEIPDSI+F+KLFPQDLFQERDNLELKV+NYILYGNG
Sbjct: 762 WIYVQWIATTKKKYFVLVRPVILYEIPDSIDFIKLFPQDLFQERDNLELKVVNYILYGNG 821
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 822 KSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSNT 881
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
+YIRKR DPSG GLI+DNESDRININPF+SIH KAKI++SLSQNHGTIRMLLNRNKEC+S
Sbjct: 882 AYIRKRNDPSGLGLIADNESDRININPFFSIHYKAKIKKSLSQNHGTIRMLLNRNKECRS 941
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGP
Sbjct: 942 WIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGP 981
>AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
Length = 1370
Score = 830 bits (2144), Expect = 0.0
Identities = 429/527 (81%), Positives = 457/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
+YSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQINI SLSTGKRNISNLL+SND+V
Sbjct: 461 LYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQINIDSLSTGKRNISNLLVSNDEV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K KLLS TFGTKE I++YSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF
Sbjct: 521 KLKLLSLKTFGTKEKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF- 579
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNELM P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRT+GIHS+F
Sbjct: 580 -QSIQERKNELMRPFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTVGIHSVF 638
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 639 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 698
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR +FSG+IHFPGE DKISRHS+ILIPPGTV N
Sbjct: 699 SRVGGLVRFEKKKKKIELKLFSGNIHFPGERDKISRHSSILIPPGTVKKKRKESKKIN-N 757
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWIATTKKKYFVLVRPVILYEIPDSI+F+KLFPQDLFQERDNLELKV+NYILYGNG
Sbjct: 758 WIYVQWIATTKKKYFVLVRPVILYEIPDSIDFIKLFPQDLFQERDNLELKVVNYILYGNG 817
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 818 KSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSNT 877
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
+YIRKR DPSG GLI+DNESDRININPF+SIH KAKI++SLSQNHGTIRMLLNRNKEC+S
Sbjct: 878 AYIRKRNDPSGLGLIADNESDRININPFFSIHYKAKIKKSLSQNHGTIRMLLNRNKECRS 937
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGP
Sbjct: 938 WIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGP 977
>AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
AFR60049.1 RNA polymerase beta'' subunit (plastid)
[Medicago truncatula]
Length = 1370
Score = 830 bits (2144), Expect = 0.0
Identities = 429/527 (81%), Positives = 457/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
+YSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQINI SLSTGKRNISNLL+SND+V
Sbjct: 461 LYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQINIDSLSTGKRNISNLLVSNDEV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K KLLS TFGTKE I++YSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF
Sbjct: 521 KLKLLSLKTFGTKEKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF- 579
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNELM P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRT+GIHS+F
Sbjct: 580 -QSIQERKNELMRPFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTVGIHSVF 638
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 639 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 698
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR +FSG+IHFPGE DKISRHS+ILIPPGTV N
Sbjct: 699 SRVGGLVRLEKKKKKIELKLFSGNIHFPGERDKISRHSSILIPPGTVKKKRKESKKIN-N 757
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWIATTKKKYFVLVRPVILYEIPDSI+F+KLFPQDLFQERDNLELKV+NYILYGNG
Sbjct: 758 WIYVQWIATTKKKYFVLVRPVILYEIPDSIDFIKLFPQDLFQERDNLELKVVNYILYGNG 817
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 818 KSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSNT 877
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
+YIRKR DPSG GLI+DNESDRININPF+SIH KAKI++SLSQNHGTIRMLLNRNKEC+S
Sbjct: 878 AYIRKRNDPSGLGLIADNESDRININPFFSIHYKAKIKKSLSQNHGTIRMLLNRNKECRS 937
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGP
Sbjct: 938 WIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGP 977
>YP_001381726.2 RNA polymerase beta' subunit [Medicago truncatula]
Length = 1374
Score = 830 bits (2144), Expect = 0.0
Identities = 429/527 (81%), Positives = 457/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
+YSNVHILPKTSHLWILSGKSCR D I FLLR+DQDQINI SLSTGKRNISNLL+SND+V
Sbjct: 465 LYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQINIDSLSTGKRNISNLLVSNDEV 524
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K KLLS TFGTKE I++YSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF
Sbjct: 525 KLKLLSLKTFGTKEKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF- 583
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNELM P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRT+GIHS+F
Sbjct: 584 -QSIQERKNELMRPFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTVGIHSVF 642
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIR
Sbjct: 643 QKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIR 702
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR +FSG+IHFPGE DKISRHS+ILIPPGTV N
Sbjct: 703 SRVGGLVRLEKKKKKIELKLFSGNIHFPGERDKISRHSSILIPPGTVKKKRKESKKIN-N 761
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
WIYVQWIATTKKKYFVLVRPVILYEIPDSI+F+KLFPQDLFQERDNLELKV+NYILYGNG
Sbjct: 762 WIYVQWIATTKKKYFVLVRPVILYEIPDSIDFIKLFPQDLFQERDNLELKVVNYILYGNG 821
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+T
Sbjct: 822 KSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSNT 881
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
+YIRKR DPSG GLI+DNESDRININPF+SIH KAKI++SLSQNHGTIRMLLNRNKEC+S
Sbjct: 882 AYIRKRNDPSGLGLIADNESDRININPFFSIHYKAKIKKSLSQNHGTIRMLLNRNKECRS 941
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGP 3
IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGP
Sbjct: 942 WIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGP 981
>AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus canadensis]
Length = 1372
Score = 829 bits (2141), Expect = 0.0
Identities = 435/525 (82%), Positives = 454/525 (86%), Gaps = 2/525 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR DAI FLLR+DQDQI+ +SLST K NISNL +SND+V
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRSDAIHFLLRKDQDQIHSNSLSTTKTNISNLSVSNDEV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K+KL +FNTFGTKE RIT+YSIFNQI DH H MYPAIFHDT LAKRRRNRF+IPFP
Sbjct: 521 KNKLFNFNTFGTKERRITNYSIFNQILCMDHRHLMYPAIFHDTFSFLAKRRRNRFLIPFP 580
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNEL PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGI SIF
Sbjct: 581 FQSIQERKNELTPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIQSIF 640
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIR
Sbjct: 641 QKEDLIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIR 700
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRV GLVR IFSG+IHFPGEMDKISR SAILIPP TV N
Sbjct: 701 SRVRGLVRLEKKKKKMELKIFSGNIHFPGEMDKISRPSAILIPPRTV-KKKRKESKKLNN 759
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
W YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYGNG
Sbjct: 760 WTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYGNG 819
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNW QDK+SSSIEEALASFVEVSTNGLIEYFLRI LVKSHT
Sbjct: 820 KSIRGISDTRIQLVRTCLVLNWAQDKRSSSIEEALASFVEVSTNGLIEYFLRIYLVKSHT 879
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
SYIRKR DPSG GLISD SDRININPF SI+SK KIQQSLSQNHGTIRMLLNRNKEC+S
Sbjct: 880 SYIRKRNDPSGLGLISD--SDRININPFLSINSKTKIQQSLSQNHGTIRMLLNRNKECRS 937
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
LIILSSSNCFQ + FNNVK N I KKDPII I+NSLGP
Sbjct: 938 LIILSSSNCFQMKPFNNVKDPNVI-------KKDPIIAIKNSLGP 975
>AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus crassicarpus]
Length = 1374
Score = 829 bits (2141), Expect = 0.0
Identities = 434/525 (82%), Positives = 453/525 (86%), Gaps = 2/525 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR DAI FLLR+DQDQI +SLST K NISN +SND+V
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRSDAIHFLLRKDQDQIQSNSLSTTKTNISNRSVSNDEV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K+KL +FNTFGTKE RITDYSIFNQI DH H MYPAIFHDT LAKRRRNRF+IPFP
Sbjct: 521 KNKLFNFNTFGTKERRITDYSIFNQILCMDHRHLMYPAIFHDTFSFLAKRRRNRFLIPFP 580
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNEL PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGI SIF
Sbjct: 581 FQSIQERKNELTPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIQSIF 640
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKEDLIEYRGI+ELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIR
Sbjct: 641 QKEDLIEYRGIQELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIR 700
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRV GLVR IFSG+I+FPGEMDKISR SAILIPP TV N
Sbjct: 701 SRVRGLVRLEKKKKKMELKIFSGNIYFPGEMDKISRPSAILIPPRTV-KKKGKESKKLNN 759
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
W YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYGNG
Sbjct: 760 WTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYGNG 819
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNW QDK+SSSIEEA ASFVEVSTNGLIEYFLRIDLVKSHT
Sbjct: 820 KSIRGISDTRIQLVRTCLVLNWAQDKRSSSIEEAFASFVEVSTNGLIEYFLRIDLVKSHT 879
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
SYIRKR DPSG GLISD SDRININPF SI+SK KIQQSLSQNHGTIRMLLNRNKEC+S
Sbjct: 880 SYIRKRNDPSGLGLISD--SDRININPFLSINSKTKIQQSLSQNHGTIRMLLNRNKECRS 937
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
LIILSSSNCFQ + FNNVK N I K KKDPII I+NSLGP
Sbjct: 938 LIILSSSNCFQMKPFNNVKDPNGI-----KIKKDPIIAIKNSLGP 977
>YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42736.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78900.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1372
Score = 828 bits (2139), Expect = 0.0
Identities = 436/527 (82%), Positives = 455/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR DAI FLLR+DQDQI+ +SLST K NISNL +SND+V
Sbjct: 461 MYSNVHILPKTSHLWILSGKSCRSDAIHFLLRKDQDQIHSNSLSTTKTNISNLSVSNDEV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQIK----DHCHFMYPAIFHDTSDLLAKRRRNRFIIP 1224
K+KL +FNT GTKE RITDYSIFNQI+ DHCH MYPA+FHDT LAKRRRNRF+IP
Sbjct: 521 KNKLFNFNTLGTKERRITDYSIFNQIQILCMDHCHLMYPALFHDTFSFLAKRRRNRFLIP 580
Query: 1223 FPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHS 1044
F QSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGI S
Sbjct: 581 F--QSIQERKNELMRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIQS 638
Query: 1043 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 864
IFQKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLN
Sbjct: 639 IFQKEDLIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLN 698
Query: 863 IRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXX 684
IRSRV GLVR IFSG+IHFPGEMDKISR SAILIPP TV
Sbjct: 699 IRSRVRGLVRLEKKKKKIELKIFSGNIHFPGEMDKISRPSAILIPPRTV-KKKRKESKKL 757
Query: 683 KNWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYG 504
NW YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYG
Sbjct: 758 NNWTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYG 817
Query: 503 NGKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKS 324
NGKSIRGISDTRIQLVRTCLVLNW QDK+SSSIEEALASFVEVSTNGLIEYFLRI LVKS
Sbjct: 818 NGKSIRGISDTRIQLVRTCLVLNWAQDKRSSSIEEALASFVEVSTNGLIEYFLRIYLVKS 877
Query: 323 HTSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKEC 144
HTSYIRKR DPSG GLISD SDRININPF SI+SK KIQQSLSQNHGTIRMLLNRNKEC
Sbjct: 878 HTSYIRKRNDPSGLGLISD--SDRININPFLSINSKTKIQQSLSQNHGTIRMLLNRNKEC 935
Query: 143 QSLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
+SLIILSSSNCFQ R FNNVK N I KKDPII I+NSLGP
Sbjct: 936 RSLIILSSSNCFQMRPFNNVKDPNGI-------KKDPIIAIKNSLGP 975
>YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus]
AMQ99218.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus mongholicus]
Length = 1376
Score = 828 bits (2139), Expect = 0.0
Identities = 436/527 (82%), Positives = 455/527 (86%), Gaps = 4/527 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLWILSGKSCR DAI FLLR+DQDQI+ +SLST K NISNL +SND+V
Sbjct: 465 MYSNVHILPKTSHLWILSGKSCRSDAIHFLLRKDQDQIHSNSLSTTKTNISNLSVSNDEV 524
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQIK----DHCHFMYPAIFHDTSDLLAKRRRNRFIIP 1224
K+KL +FNT GTKE RITDYSIFNQI+ DHCH MYPA+FHDT LAKRRRNRF+IP
Sbjct: 525 KNKLFNFNTLGTKERRITDYSIFNQIQILCMDHCHLMYPALFHDTFSFLAKRRRNRFLIP 584
Query: 1223 FPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHS 1044
F QSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGI S
Sbjct: 585 F--QSIQERKNELMRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIQS 642
Query: 1043 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 864
IFQKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLN
Sbjct: 643 IFQKEDLIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLN 702
Query: 863 IRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXX 684
IRSRV GLVR IFSG+IHFPGEMDKISR SAILIPP TV
Sbjct: 703 IRSRVRGLVRLEKKKKKIELKIFSGNIHFPGEMDKISRPSAILIPPRTV-KKKRKESKKL 761
Query: 683 KNWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYG 504
NW YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYG
Sbjct: 762 NNWTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYG 821
Query: 503 NGKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKS 324
NGKSIRGISDTRIQLVRTCLVLNW QDK+SSSIEEALASFVEVSTNGLIEYFLRI LVKS
Sbjct: 822 NGKSIRGISDTRIQLVRTCLVLNWAQDKRSSSIEEALASFVEVSTNGLIEYFLRIYLVKS 881
Query: 323 HTSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKEC 144
HTSYIRKR DPSG GLISD SDRININPF SI+SK KIQQSLSQNHGTIRMLLNRNKEC
Sbjct: 882 HTSYIRKRNDPSGLGLISD--SDRININPFLSINSKTKIQQSLSQNHGTIRMLLNRNKEC 939
Query: 143 QSLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
+SLIILSSSNCFQ R FNNVK N I KKDPII I+NSLGP
Sbjct: 940 RSLIILSSSNCFQMRPFNNVKDPNGI-------KKDPIIAIKNSLGP 979
>AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis lambertii]
Length = 1368
Score = 825 bits (2131), Expect = 0.0
Identities = 434/525 (82%), Positives = 451/525 (85%), Gaps = 2/525 (0%)
Frame = -2
Query: 1571 MYSNVHILPKTSHLWILSGKSCRYDAIDFLLRRDQDQINIHSLSTGKRNISNLLISNDQV 1392
MYSNVHILPKTSHLW+LSGKSCR DAI FLLR+DQDQI+IHSLST K NISNL +SNDQV
Sbjct: 461 MYSNVHILPKTSHLWVLSGKSCRSDAIHFLLRKDQDQIHIHSLSTTKTNISNLSVSNDQV 520
Query: 1391 KHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFP 1218
K+KLL+FNTFGTKE +ITDYSIFNQI DHCH MYPAIFHDT LAKRRRNRF+IPF
Sbjct: 521 KNKLLNFNTFGTKERKITDYSIFNQILCMDHCHLMYPAIFHDTFSFLAKRRRNRFLIPF- 579
Query: 1217 LQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIF 1038
QSIQERKNEL PSGVSIEIPINGIFHRNSIFA FDDPQYRRQSSGITKYRTIGI SIF
Sbjct: 580 -QSIQERKNELTPPSGVSIEIPINGIFHRNSIFASFDDPQYRRQSSGITKYRTIGIQSIF 638
Query: 1037 QKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIR 858
QKEDLIEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIR
Sbjct: 639 QKEDLIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIR 698
Query: 857 SRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTVXXXXXXXXXXXKN 678
SRVGGLVR IFSG+IHFPGEMDKISR SAILIPP TV N
Sbjct: 699 SRVGGLVRLEKKKKKMELKIFSGNIHFPGEMDKISRPSAILIPPRTVKKKKWKESKKLNN 758
Query: 677 WIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGNG 498
W YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYGNG
Sbjct: 759 WTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYGNG 818
Query: 497 KSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSHT 318
KSIRGISDTRIQLVRTCLVLNW QDK+SSSI+EALASFVEVST GLIEYFLRIDLVKSHT
Sbjct: 819 KSIRGISDTRIQLVRTCLVLNWAQDKRSSSIDEALASFVEVSTKGLIEYFLRIDLVKSHT 878
Query: 317 SYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQS 138
SYIRKR DPSG GLI SDRIN NPF SIHSK KIQQS SQNHGTIRMLLNRNK +S
Sbjct: 879 SYIRKRNDPSGLGLI----SDRINRNPFLSIHSKTKIQQSFSQNHGTIRMLLNRNKG-RS 933
Query: 137 LIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGP 3
LIILSSSNCFQ R FNNVK N I KKDPIIPI+NSLGP
Sbjct: 934 LIILSSSNCFQMRPFNNVKDPNGI-------KKDPIIPIKNSLGP 971