BLASTX nr result

ID: Glycyrrhiza32_contig00016244 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00016244
         (390 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]    55   2e-06
GAU10804.1 hypothetical protein TSUD_425290, partial [Trifolium ...    53   5e-06
KHN13235.1 Putative ribonuclease H protein, partial [Glycine soja]     51   7e-06

>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/63 (42%), Positives = 41/63 (65%)
 Frame = -2

Query: 194 LGIAGSLRAELSALLFGLEAAWSQGVQRLLVYSDSALAIQKVTQGVSLHHLHGSLVRGIQ 15
           LG+   L AEL A+L GL  AW   ++ LL YSDSA AI+ +T+ V + H + +++  I+
Sbjct: 604 LGVTNILHAELMAILKGLLLAWELNIKDLLCYSDSATAIKLITEPVDVWHHYAAILNNIK 663

Query: 14  DLL 6
           D+L
Sbjct: 664 DIL 666


>GAU10804.1 hypothetical protein TSUD_425290, partial [Trifolium subterraneum]
          Length = 174

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 26/63 (41%), Positives = 40/63 (63%)
 Frame = -2

Query: 194 LGIAGSLRAELSALLFGLEAAWSQGVQRLLVYSDSALAIQKVTQGVSLHHLHGSLVRGIQ 15
           LG+   L AEL A+L GL  AW   ++ L  YSDSA AI+ +T+ V + H + +++  I+
Sbjct: 54  LGVTNILHAELMAILKGLLIAWELNIKDLSCYSDSATAIKLITEPVDVWHHYAAILNNIK 113

Query: 14  DLL 6
           D+L
Sbjct: 114 DIL 116


>KHN13235.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 86

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 24/62 (38%), Positives = 39/62 (62%)
 Frame = -2

Query: 191 GIAGSLRAELSALLFGLEAAWSQGVQRLLVYSDSALAIQKVTQGVSLHHLHGSLVRGIQD 12
           G++ S+ AEL A+  GL   W +G++ ++  SDS LA+Q VT+GV   H +  +V  I++
Sbjct: 1   GLSSSVNAELHAIFHGLRCEWIKGLRNIICKSDSKLALQFVTEGVIQSHPYAPIVAKIRE 60

Query: 11  LL 6
            L
Sbjct: 61  FL 62


Top