BLASTX nr result
ID: Glycyrrhiza32_contig00013779
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00013779
(829 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 340 e-104
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 338 e-103
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 315 e-100
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 317 5e-96
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 315 2e-95
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 315 2e-95
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 315 2e-95
AAX19931.1 viral replicase [Nandina mosaic virus] 314 7e-95
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 313 1e-94
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 313 1e-94
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 310 1e-93
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 310 1e-93
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 310 1e-93
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 310 2e-93
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 310 2e-93
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 310 2e-93
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 309 5e-93
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 307 2e-92
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678... 198 4e-54
NP_042695.1 RNA-dependent RNA polymerase [Cassava common mosaic ... 122 1e-27
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 340 bits (873), Expect = e-104
Identities = 170/275 (61%), Positives = 198/275 (72%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNP+DAD
Sbjct: 375 ILQFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADIS 434
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
F++F + LE SAE+ HT LKV + LS QL A+H LG++R GG
Sbjct: 435 SRFQDFSRATNSTPKPTVEAVLEASAESPDHHTQLKVLCSALSEGQLEAIHALGHSRCGG 494
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP++T + E ++AS A + D P +P TLPWVAWLPKLN
Sbjct: 495 PLLPELTAKSTPVEQCPDLPPCPTKSQASPASSNPSGPDAQPTAQNPETLPWVAWLPKLN 554
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALE+Q DPSTGE+IMPITD ++L +ATLP HW L ++L+TLRSLNRFPT W
Sbjct: 555 ALGFEALEVQHDPSTGEMIMPITDTQELPRATLPAHWQGHNLERILSTLRSLNRFPTPWS 614
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR RARAFTSDVKNSRTGKALHRE+QTWKETQTM
Sbjct: 615 PDRTRARAFTSDVKNSRTGKALHRESQTWKETQTM 649
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 338 bits (867), Expect = e-103
Identities = 172/275 (62%), Positives = 192/275 (69%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
VLQFF+GRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNP+DADT
Sbjct: 377 VLQFFQGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADTS 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
R F++F + +LE +AE+ HT LKV L +QL A+H LG+ R GG
Sbjct: 437 RGFQDFTRATTPKLQPTVEATLEATAESSDHHTQLKVLCDTLPEKQLEAIHALGHLRCGG 496
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP T E + AS A + D P P TLPWVAWLPKLN
Sbjct: 497 PLLPAPTQSCSPAEPCPDLPPSPVKSTASPASPDPNVLDAQPTTQAPETLPWVAWLPKLN 556
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALE+Q DPSTGE+IMPITD RDL +ATLP HW L +LTTLRSLNRFPT W
Sbjct: 557 ALGFEALEVQHDPSTGEMIMPITDTRDLPRATLPPHWQGHDLESILTTLRSLNRFPTPWS 616
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 617 PDRTRARAFTSDVKNSRTGKALHRESQAWKETQTM 651
>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 315 bits (807), Expect = e-100
Identities = 161/275 (58%), Positives = 188/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
+F+ F + +LE AE H SL++ LS QL ALH+LGN R GG
Sbjct: 437 HSFQAFCQAAAA-----VETTLEQQAETPDEHQSLRLDCPTLSEHQLWALHKLGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP+ E + N +P DP TLPWVAWLPKLN
Sbjct: 492 PLLPQRPDTSTVVEPCPDLPPETHAAPEPSQRNT--QAPNLPSPQDPTTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQ DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRSRARAFTSDVKNSRTGKALHRESQVWKETQTM 644
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 317 bits (812), Expect = 5e-96
Identities = 162/275 (58%), Positives = 188/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PF +P PVNPDDA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFARPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
+F+ F + LE SAE H SL++ LS QL ALHELGNTR GG
Sbjct: 437 HSFQAFCQATAA-----VGTILEQSAETPDEHQSLRLNCPTLSEHQLWALHELGNTRCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP+ E + N +P DP TLPWVAWLPKLN
Sbjct: 492 PLLPQRPDTSTVVEPCPDLPPETHAAPEPSQRNT--QAPDLPSPQDPTTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQ DPSTG +IMPITD ++L +A P HW P + ++++TLRS+NR+PT W
Sbjct: 550 ALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSINRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRSRARAFTSDVKNSRTGKALHRESQVWKETQTM 644
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 315 bits (808), Expect = 2e-95
Identities = 162/275 (58%), Positives = 187/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
+F+ F + LE AE H SL++ LS QL ALHELGN R GG
Sbjct: 437 HSFQAFCQAAAA-----VETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP+ E + N +P DP TLPWVAWLPKLN
Sbjct: 492 PLLPQRPDTSTVVEPCPDLPPETHAAPEPSQRNT--QAPNLPSPQDPTTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQ DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRSRARAFTSDVKNSRTGKALHRESQVWKETQTM 644
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 315 bits (808), Expect = 2e-95
Identities = 162/275 (58%), Positives = 187/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
+F+ F + LE AE H SL++ LS QL ALHELGN R GG
Sbjct: 437 HSFQAFCQAAAA-----VETILEQQAETPDEHXSLRLDCPTLSEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP+ E + N +P DP TLPWVAWLPKLN
Sbjct: 492 PLLPQRPDTSTVVEPCPDLPPETHAAPEPSQRNT--QAPNLPSPQDPTTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQ DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRSRARAFTSDVKNSRTGKALHRESQVWKETQTM 644
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 315 bits (808), Expect = 2e-95
Identities = 162/275 (58%), Positives = 187/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
+F+ F + LE AE H SL++ LS QL ALHELGN R GG
Sbjct: 437 HSFQAFCQAAAA-----VETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP+ E + N +P DP TLPWVAWLPKLN
Sbjct: 492 PLLPQRPDTSTVVEPCPDLPPETHAAPEPSQRNT--QAPNLPSPQDPTTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQ DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRSRARAFTSDVKNSRTGKALHRESQVWKETQTM 644
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 314 bits (804), Expect = 7e-95
Identities = 163/275 (59%), Positives = 188/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +PFT+P PVNPDDA+T
Sbjct: 377 ILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLSPFTRPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
+FREF + + LE S E+ +HTSLKV LS EQL ALHELGN+R GG
Sbjct: 437 ESFREFIQPLNPSPTATVTEMLENSTESDVTHTSLKVVPQSLSPEQLSALHELGNSRCGG 496
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
P+LPK + T S+ L + H P P + K
Sbjct: 497 PMLPKRSSNH---------------THTSSDLLRRRH----PRQQRSTNPPMGSLAAKAK 537
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
+GFEALEIQTDPSTG+ IMPITD R+L +A +P HW+ P K++ TLR+LNRFPT W
Sbjct: 538 RIGFEALEIQTDPSTGQPIMPITDTRELPRAIMPAHWDSPQFEKIIATLRNLNRFPTPWS 597
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDRARARAFTSDVKNSRTGKALHRE+QTWKETQTM
Sbjct: 598 PDRARARAFTSDVKNSRTGKALHRESQTWKETQTM 632
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 313 bits (803), Expect = 1e-94
Identities = 161/275 (58%), Positives = 187/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVDTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
+F+ F + LE AE H SL++ LS QL ALHELGN R GG
Sbjct: 437 HSFQAFCQAAAA-----VETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP+ E + N +P DP TLPWVAWLPKLN
Sbjct: 492 PLLPQRPDTSTVVEPCPDLPPETHAAPEPSQRNT--QAPNLPSPQDPTTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQ DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRSRARAFTSDVKNSRTGKALHRESQVWKETQTM 644
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 313 bits (803), Expect = 1e-94
Identities = 161/275 (58%), Positives = 186/275 (67%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
+F+ F + LE AE H SL++ LS QL ALH LGN R GG
Sbjct: 437 HSFQAFCQAAAA-----VETILEQQAETPDEHQSLRLDCPTLSEHQLWALHALGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLP+ E + N +P DP TLPWVAWLPKLN
Sbjct: 492 PLLPQRPDTSTAVEPCPDLPPETHAAPEPSQRNT--QAPNLPSPQDPTTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQ DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRSRARAFTSDVKNSRTGKALHRESQVWKETQTM 644
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 310 bits (795), Expect = 1e-93
Identities = 163/275 (59%), Positives = 188/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
++F+ F + +L +E H SL + L QL ALHELGN R GG
Sbjct: 437 QSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLPK P + R +D +P DP+TLPWVAWLPKLN
Sbjct: 492 PLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQTDPSTGE+IMPITD R+L +A HW P + ++L+TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 310 bits (795), Expect = 1e-93
Identities = 163/275 (59%), Positives = 188/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
++F+ F + +L +E H SL + L QL ALHELGN R GG
Sbjct: 437 QSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLPK P + R +D +P DP+TLPWVAWLPKLN
Sbjct: 492 PLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQTDPSTGE+IMPITD R+L +A HW P + ++L+TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 310 bits (795), Expect = 1e-93
Identities = 160/276 (57%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPP F +PFT+P PVNPDDA+T
Sbjct: 377 ILNFFRGRPSFVKLIQALDWQPITLEFPVRKVHTLLRGPPWFDSPFTRPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
F+ F + LE AE H SL++ LS QL +LHELGN R GG
Sbjct: 437 HIFQAFCQAAAA-----VETILEQQAETPEEHQSLRLDCPTLSEHQLWSLHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGD-HTDQVPVNSDPATLPWVAWLPKL 539
PLLP+ T A+ +Q + +P DP TLPWVAWLPKL
Sbjct: 492 PLLPQ---RPDTATVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPKL 548
Query: 540 NALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSW 719
NALGFEALEIQ DPSTG +IMPITD ++L +A P HW +P + ++++TLRSLNR+PT W
Sbjct: 549 NALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQDPDMEQIISTLRSLNRYPTPW 608
Query: 720 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 609 NPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTM 644
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 310 bits (794), Expect = 2e-93
Identities = 163/279 (58%), Positives = 189/279 (67%), Gaps = 4/279 (1%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 377 LLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
++F+ F +LE AE H SL + L QL ALHELGNTR GG
Sbjct: 437 QSFQAFCQATITAEA-----ALEQQAETPDEHQSLSLKCPTLPEHQLWALHELGNTRCGG 491
Query: 363 PLLPK----ITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWL 530
PLLPK +T E + + + T +P DP TLPWVAWL
Sbjct: 492 PLLPKGPAKLTTVEPCPDLPAENSANPEPPRKTT------QTLDLPHPEDPTTLPWVAWL 545
Query: 531 PKLNALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFP 710
PKLNALGFEALEIQTDPSTGE+IMPITD R+L +A HW P + ++++TLRS NR+P
Sbjct: 546 PKLNALGFEALEIQTDPSTGEMIMPITDTRELPRAEGHAHWQGPDMERIISTLRSFNRYP 605
Query: 711 TSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
T W PDR+RA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 606 TPWNPDRSRAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 310 bits (794), Expect = 2e-93
Identities = 162/275 (58%), Positives = 188/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
++F+ F + +L +E H SL + + L QL ALHELGN R GG
Sbjct: 437 QSFQAFCQATAT-----VEXTLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLPK P + R +D +P DP+TLPWVAWLPKLN
Sbjct: 492 PLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQTDPSTGE+IMPITD R+L +A HW P + ++L+TLR LNR+PT W
Sbjct: 550 ALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 310 bits (793), Expect = 2e-93
Identities = 162/275 (58%), Positives = 188/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
++F+ F + +L +E H SL + + L QL ALHELGN R GG
Sbjct: 437 QSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLPK P + R +D +P DP+TLPWVAWLPKLN
Sbjct: 492 PLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQTDPSTGE+IMPITD R+L +A HW P + ++L+TLR LNR+PT W
Sbjct: 550 ALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 309 bits (791), Expect = 5e-93
Identities = 162/275 (58%), Positives = 188/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
++F+ F + +L +E H SL + L QL ALHELGN R GG
Sbjct: 437 QSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCGG 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLPK P + R +D +P DP+TLPWVAWLPKLN
Sbjct: 492 PLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQTDPSTGE+IMPITD R+L +A HW P ++++L+TLRSLNR+PT W
Sbjct: 550 ALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMARILSTLRSLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQ M
Sbjct: 610 PDRARAKAFTSDVKNSRTGKALHRESQVWKETQAM 644
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 307 bits (787), Expect = 2e-92
Identities = 161/275 (58%), Positives = 187/275 (68%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 377 LLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETT 436
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
++F+ F + +L +E H SL + + L QL ALHELGN R G
Sbjct: 437 QSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCGA 491
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNSDPATLPWVAWLPKLN 542
PLLPK P + R +D +P DP+TLPWVAWLPKLN
Sbjct: 492 PLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPWVAWLPKLN 549
Query: 543 ALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWC 722
ALGFEALEIQTDPSTGE+IMPITD R+L +A HW P + ++L+TLR LNR+PT W
Sbjct: 550 ALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPWN 609
Query: 723 PDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 610 PDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1 RNA-dependent
RNA polymerase [Tulip virus X]
Length = 1361
Score = 198 bits (504), Expect = 4e-54
Identities = 124/284 (43%), Positives = 154/284 (54%), Gaps = 10/284 (3%)
Frame = +3
Query: 3 VLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTM 182
+++FF+G P KLIKAL WQP+ LEF V TV R PPGF +P +P PVN DA T
Sbjct: 376 LVRFFKGSPDHTKLIKALQWQPVLLEFKVSTVLVHKRTPPGFRHPLCRPLPVNEVDALTT 435
Query: 183 RAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGG 362
A ++ SL + + LS +QL ALH LG+ R G
Sbjct: 436 AA---------------------------CANQSLPLDN--LSEDQLEALHVLGSLRTDG 466
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPVNS---------DPATLP 515
LP +P + E T ++A + T V V++ DP TLP
Sbjct: 467 ESLP--SPPKAPLETGPHPTP----TISAAGPTKTVPTPNVEVSANPLTGTPLPDPDTLP 520
Query: 516 WVAWLPKLNALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPG-LSKVLTTLR 692
W AWLP L ALGFEA EIQTDP IMPITD++ L T E+ + KV+ TL+
Sbjct: 521 WKAWLPHLRALGFEASEIQTDPRDHSTIMPITDIQTLPHETFDEYDSTSSPFDKVVITLK 580
Query: 693 SLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQT 824
LNR PT W PDR RARA+ SD+KNSRTGKALH+E+Q WKETQT
Sbjct: 581 QLNRSPTPWTPDRLRARAYASDIKNSRTGKALHKESQNWKETQT 624
>NP_042695.1 RNA-dependent RNA polymerase [Cassava common mosaic virus] AAC54775.1
ORF 1; putative RNA dependent RNA polymerase [Cassava
common mosaic virus] prf||2207297A ORF 1 [Cassava common
mosaic virus]
Length = 1449
Score = 122 bits (306), Expect = 1e-27
Identities = 66/159 (41%), Positives = 90/159 (56%), Gaps = 4/159 (2%)
Frame = +3
Query: 363 PLLPKITPEEQDREXXXXXXXXXXXTKASAALNQGDHTDQVPV----NSDPATLPWVAWL 530
P LP ++PE + R + ++T+ V N+ A LPW W+
Sbjct: 566 PTLP-LSPELEKRHEALKSKAESSEASKTEPRKDENYTEMVNKTLIENAKEAGLPWAVWM 624
Query: 531 PKLNALGFEALEIQTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFP 710
PKLNALGFEA E Q P T +IMPITD+ K +P H ++L L++L+R P
Sbjct: 625 PKLNALGFEAKEKQISPITKSMIMPITDI----KTGIPVHRETKAPQELLDLLKALSRMP 680
Query: 711 TSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 827
T W PD RA++FTSD+KN RTGK L +E+Q+WKE QT+
Sbjct: 681 TLWTPDTLRAKSFTSDIKNGRTGKCLQQESQSWKEAQTL 719