BLASTX nr result

ID: Glycyrrhiza32_contig00013134 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00013134
         (260 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum]    62   2e-09
GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterran...    60   8e-09
GAU35593.1 hypothetical protein TSUD_295290 [Trifolium subterran...    53   3e-06

>GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum]
          Length = 521

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 19/88 (21%)
 Frame = +1

Query: 34  WSSLWKIQAPEKVRFFFWLAWHDSL-------------------LGNSTFFQHDGFLEWQ 156
           WS LW I APEK++FF W A H +L                      S FF+ D F  W 
Sbjct: 231 WSWLWHIPAPEKIKFFLWTALHKALPTKAMLSHRGILHDSSCPRCNKSIFFEDDEFYVWL 290

Query: 157 QNALSGDRPSLFITGSWTAWCMRNTKCL 240
            N L      LF    W  WC RN  C+
Sbjct: 291 WNGLDSPSKLLFTAAIWWIWCTRNNLCM 318


>GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterraneum]
          Length = 357

 Score = 60.5 bits (145), Expect = 8e-09
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = +1

Query: 34  WSSLWKIQAPEKVRFFFWLAWHDSL----------LGNSTFFQHDGFLEWQQNALSGDRP 183
           WS LW + AP+K++FFFW   H+S             +  FFQ D    W +  LS    
Sbjct: 135 WSWLWNVSAPKKIKFFFWTMLHNSFPTKDMLAHRGCSDHHFFQGDDVYVWLRYDLSSSAL 194

Query: 184 SLFITGSWTAWCMRNTKCL 240
            LFI G W  W  RN  CL
Sbjct: 195 LLFIAGIWWIWRARNALCL 213


>GAU35593.1 hypothetical protein TSUD_295290 [Trifolium subterraneum]
          Length = 404

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
 Frame = +1

Query: 34  WSSLWKIQAPEKVRFFFWLAWHDS-----LLGNSTF----------FQHDGFLEWQQNAL 168
           WS +WK+Q  EK++FFFWLA H+S     LL +              Q++ FL   ++  
Sbjct: 188 WSWIWKLQLFEKIKFFFWLACHNSVPTLYLLNHRKMSSSATCTRCGLQNESFLHCIRDCA 247

Query: 169 SGDRPSLFITGSWTAWCMRNTKCL 240
           +  +  +F  G W +W  RN  CL
Sbjct: 248 TSSQALIFSAGVWWSWRHRNLMCL 271


Top