BLASTX nr result

ID: Glycyrrhiza32_contig00010291 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00010291
         (1280 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN05316.1 Putative mediator of RNA polymerase II transcription ...   372   e-125
XP_006585556.1 PREDICTED: mediator of RNA polymerase II transcri...   372   e-125
XP_014515802.1 PREDICTED: mediator of RNA polymerase II transcri...   367   e-123
XP_003531638.1 PREDICTED: mediator of RNA polymerase II transcri...   367   e-123
XP_007135611.1 hypothetical protein PHAVU_010G143300g [Phaseolus...   365   e-123
XP_013444227.1 mediator of RNA polymerase II transcription subun...   365   e-122
AFK47538.1 unknown [Medicago truncatula]                              363   e-122
XP_004510329.1 PREDICTED: mediator of RNA polymerase II transcri...   363   e-122
XP_014515801.1 PREDICTED: mediator of RNA polymerase II transcri...   362   e-121
XP_017407559.1 PREDICTED: mediator of RNA polymerase II transcri...   362   e-121
XP_017623205.1 PREDICTED: mediator of RNA polymerase II transcri...   361   e-121
XP_016671895.1 PREDICTED: mediator of RNA polymerase II transcri...   360   e-120
XP_012468480.1 PREDICTED: mediator of RNA polymerase II transcri...   359   e-120
OMO66469.1 Mediator complex, subunit Med6 [Corchorus olitorius]       359   e-120
XP_004510328.1 PREDICTED: mediator of RNA polymerase II transcri...   357   e-119
GAU42237.1 hypothetical protein TSUD_351470 [Trifolium subterran...   357   e-119
AGZ15418.1 mediator of RNA polymerase II transcription subunit 6...   355   e-119
XP_015889962.1 PREDICTED: mediator of RNA polymerase II transcri...   354   e-118
XP_007217752.1 hypothetical protein PRUPE_ppa010369mg [Prunus pe...   352   e-118
XP_007024366.1 PREDICTED: mediator of RNA polymerase II transcri...   352   e-117

>KHN05316.1 Putative mediator of RNA polymerase II transcription subunit 6
           [Glycine soja]
          Length = 241

 Score =  372 bits (955), Expect = e-125
 Identities = 190/239 (79%), Positives = 195/239 (81%)
 Frame = +2

Query: 182 GEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSVHP 361
           G GGA QPPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWT NNEQLRMRSVHP
Sbjct: 4   GGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHP 63

Query: 362 LDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGSIYQAPQLCNV 541
           LD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDGSIYQAPQLCNV
Sbjct: 64  LDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNV 123

Query: 542 FAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVKEVKRVDHILA 721
           FAARIGRALYYIQKAFTTAASKLEKIGY DSENETALLE K  KE ID+KEVKRVDHILA
Sbjct: 124 FAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKRVDHILA 183

Query: 722 SLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIIDQGPAKRMKF 898
           SLQRKL                 TAE                P  DPIIDQGPAKRMKF
Sbjct: 184 SLQRKLPPAPPPPPFPEGYVPPPTAE-TEKGTETQEAAETQAPTADPIIDQGPAKRMKF 241


>XP_006585556.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X2 [Glycine max] KRH44248.1 hypothetical protein
           GLYMA_08G199200 [Glycine max]
          Length = 249

 Score =  372 bits (955), Expect = e-125
 Identities = 190/239 (79%), Positives = 195/239 (81%)
 Frame = +2

Query: 182 GEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSVHP 361
           G GGA QPPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWT NNEQLRMRSVHP
Sbjct: 12  GGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHP 71

Query: 362 LDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGSIYQAPQLCNV 541
           LD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDGSIYQAPQLCNV
Sbjct: 72  LDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNV 131

Query: 542 FAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVKEVKRVDHILA 721
           FAARIGRALYYIQKAFTTAASKLEKIGY DSENETALLE K  KE ID+KEVKRVDHILA
Sbjct: 132 FAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKRVDHILA 191

Query: 722 SLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIIDQGPAKRMKF 898
           SLQRKL                 TAE                P  DPIIDQGPAKRMKF
Sbjct: 192 SLQRKLPPAPPPPPFPEGYVPPPTAE-TEKGTETQEAAETQAPTADPIIDQGPAKRMKF 249


>XP_014515802.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X2 [Vigna radiata var. radiata]
          Length = 248

 Score =  367 bits (943), Expect = e-123
 Identities = 193/250 (77%), Positives = 200/250 (80%), Gaps = 4/250 (1%)
 Frame = +2

Query: 161 MATPGPGGE----GGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSN 328
           MAT  PG +    GGA  PPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWT N
Sbjct: 1   MAT-APGNQMLEGGGAPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCN 59

Query: 329 NEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDG 508
           NEQLRMRSVHPLD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDG
Sbjct: 60  NEQLRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDG 119

Query: 509 SIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDV 688
           SIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETAL+E K  KE ID+
Sbjct: 120 SIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDI 179

Query: 689 KEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPII 868
           KEVKRVDHILASLQRKL                 TAE                 A DPII
Sbjct: 180 KEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAATA-DPII 238

Query: 869 DQGPAKRMKF 898
           DQGPAKRMKF
Sbjct: 239 DQGPAKRMKF 248


>XP_003531638.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X1 [Glycine max] KRH44247.1 hypothetical protein
           GLYMA_08G199200 [Glycine max]
          Length = 252

 Score =  367 bits (941), Expect = e-123
 Identities = 190/242 (78%), Positives = 195/242 (80%), Gaps = 3/242 (1%)
 Frame = +2

Query: 182 GEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSVHP 361
           G GGA QPPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWT NNEQLRMRSVHP
Sbjct: 12  GGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHP 71

Query: 362 LDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGSIYQAPQLCNV 541
           LD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDGSIYQAPQLCNV
Sbjct: 72  LDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNV 131

Query: 542 FAARIGRALYYIQKAFTTAASKLEKIGY---VDSENETALLEPKVGKEAIDVKEVKRVDH 712
           FAARIGRALYYIQKAFTTAASKLEKIGY    DSENETALLE K  KE ID+KEVKRVDH
Sbjct: 132 FAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKEVKRVDH 191

Query: 713 ILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIIDQGPAKRM 892
           ILASLQRKL                 TAE                P  DPIIDQGPAKRM
Sbjct: 192 ILASLQRKLPPAPPPPPFPEGYVPPPTAE-TEKGTETQEAAETQAPTADPIIDQGPAKRM 250

Query: 893 KF 898
           KF
Sbjct: 251 KF 252


>XP_007135611.1 hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
           ESW07605.1 hypothetical protein PHAVU_010G143300g
           [Phaseolus vulgaris]
          Length = 247

 Score =  365 bits (937), Expect = e-123
 Identities = 192/249 (77%), Positives = 198/249 (79%), Gaps = 3/249 (1%)
 Frame = +2

Query: 161 MATPGPGG---EGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 331
           MAT  PG    EGG    PGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWT NN
Sbjct: 1   MAT-APGNQMMEGGPPPLPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNN 59

Query: 332 EQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGS 511
           EQLRMRSVHPLD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDGS
Sbjct: 60  EQLRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGS 119

Query: 512 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVK 691
           IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETAL+E K  KE ID+K
Sbjct: 120 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIK 179

Query: 692 EVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIID 871
           EVKRVDHILASLQRKL                 TAE                P  DPIID
Sbjct: 180 EVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAE-AEKGTETQEAAETQAPTADPIID 238

Query: 872 QGPAKRMKF 898
           QGPAKRMKF
Sbjct: 239 QGPAKRMKF 247


>XP_013444227.1 mediator of RNA polymerase II transcription subunit 6 [Medicago
           truncatula] KEH18254.1 mediator of RNA polymerase II
           transcription subunit 6 [Medicago truncatula]
          Length = 248

 Score =  365 bits (936), Expect = e-122
 Identities = 189/249 (75%), Positives = 198/249 (79%), Gaps = 3/249 (1%)
 Frame = +2

Query: 161 MATPGPGGEGGAV---QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 331
           MATPG G   G V   QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN
Sbjct: 1   MATPGMGMLDGGVPTAQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 60

Query: 332 EQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGS 511
           EQLRMRS HPLD SQL+KM G EYVLSEVMEPHLF+++KQKRDSPDKVTPMLAYYILDGS
Sbjct: 61  EQLRMRSHHPLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGS 120

Query: 512 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVK 691
           IYQAPQL NVFAARIGRALYYI+KAFTTAASKLEKIGYVDSENET + EPKV KE ID+K
Sbjct: 121 IYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKETIDLK 180

Query: 692 EVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIID 871
           E+KRVDHILASLQRKL                 TAE                P VDPI+D
Sbjct: 181 EIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAE-TEKGPETQEAAESLAPTVDPILD 239

Query: 872 QGPAKRMKF 898
           QGPAKRMKF
Sbjct: 240 QGPAKRMKF 248


>AFK47538.1 unknown [Medicago truncatula]
          Length = 248

 Score =  363 bits (931), Expect = e-122
 Identities = 188/249 (75%), Positives = 198/249 (79%), Gaps = 3/249 (1%)
 Frame = +2

Query: 161 MATPGPGGEGGAV---QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 331
           MATPG G   G V   QPPGTDMTGICFRDQLWLNTYPLDR+LVFDYFALSPFYDWTSNN
Sbjct: 1   MATPGMGMLDGGVPTAQPPGTDMTGICFRDQLWLNTYPLDRDLVFDYFALSPFYDWTSNN 60

Query: 332 EQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGS 511
           EQLRMRS HPLD SQL+KM G EYVLSEVMEPHLF+++KQKRDSPDKVTPMLAYYILDGS
Sbjct: 61  EQLRMRSHHPLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGS 120

Query: 512 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVK 691
           IYQAPQL NVFAARIGRALYYI+KAFTTAASKLEKIGYVDSENET + EPKV KE ID+K
Sbjct: 121 IYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKETIDLK 180

Query: 692 EVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIID 871
           E+KRVDHILASLQRKL                 TAE                P VDPI+D
Sbjct: 181 EIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAE-TEKGPETQEAAESLAPTVDPILD 239

Query: 872 QGPAKRMKF 898
           QGPAKRMKF
Sbjct: 240 QGPAKRMKF 248


>XP_004510329.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X2 [Cicer arietinum]
          Length = 249

 Score =  363 bits (931), Expect = e-122
 Identities = 190/250 (76%), Positives = 199/250 (79%), Gaps = 4/250 (1%)
 Frame = +2

Query: 161 MATPGPGGEGGAV---QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 331
           MA PG G   G V   QPPGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYDWTSNN
Sbjct: 1   MAAPGAGMMEGGVPTAQPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTSNN 60

Query: 332 EQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGS 511
           EQLRMRS+HPLD SQLSKMTGTEYVLSEVMEPHLF++RKQKRDSPDKVTPMLAYYILDGS
Sbjct: 61  EQLRMRSLHPLDLSQLSKMTGTEYVLSEVMEPHLFIMRKQKRDSPDKVTPMLAYYILDGS 120

Query: 512 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPK-VGKEAIDV 688
           IYQAPQL NVFAARIGRALYYIQKAFTTAASKLEKIGYVDSEN+T L EPK   KE +D+
Sbjct: 121 IYQAPQLSNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENDTTLPEPKAASKETVDI 180

Query: 689 KEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPII 868
           KE+KRVDHILASLQ KL                 TAE                P+VDPII
Sbjct: 181 KELKRVDHILASLQHKLPPAPPPPPFPEGYVPPSTAE-TEKGPETQEATESQAPSVDPII 239

Query: 869 DQGPAKRMKF 898
           DQGPAKRMKF
Sbjct: 240 DQGPAKRMKF 249


>XP_014515801.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X1 [Vigna radiata var. radiata]
          Length = 251

 Score =  362 bits (929), Expect = e-121
 Identities = 193/253 (76%), Positives = 200/253 (79%), Gaps = 7/253 (2%)
 Frame = +2

Query: 161 MATPGPGGE----GGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSN 328
           MAT  PG +    GGA  PPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWT N
Sbjct: 1   MAT-APGNQMLEGGGAPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCN 59

Query: 329 NEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDG 508
           NEQLRMRSVHPLD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDG
Sbjct: 60  NEQLRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDG 119

Query: 509 SIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGY---VDSENETALLEPKVGKEA 679
           SIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGY   VDSENETAL+E K  KE 
Sbjct: 120 SIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSVDSENETALVESKTAKET 179

Query: 680 IDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVD 859
           ID+KEVKRVDHILASLQRKL                 TAE                 A D
Sbjct: 180 IDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAATA-D 238

Query: 860 PIIDQGPAKRMKF 898
           PIIDQGPAKRMKF
Sbjct: 239 PIIDQGPAKRMKF 251


>XP_017407559.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Vigna angularis] BAT98451.1 hypothetical protein
           VIGAN_09210700 [Vigna angularis var. angularis]
          Length = 251

 Score =  362 bits (928), Expect = e-121
 Identities = 191/253 (75%), Positives = 200/253 (79%), Gaps = 7/253 (2%)
 Frame = +2

Query: 161 MATPGPGGE----GGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSN 328
           MAT  PG +    GGA  PPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWT N
Sbjct: 1   MAT-APGNQMLEGGGAPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCN 59

Query: 329 NEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDG 508
           NEQLRMRSVHPLD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDG
Sbjct: 60  NEQLRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDG 119

Query: 509 SIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGY---VDSENETALLEPKVGKEA 679
           SIYQAPQLCNVFAARIGRALYYI+KAFTTAASKLEKIGY   VDSENETAL+E K  KE 
Sbjct: 120 SIYQAPQLCNVFAARIGRALYYIEKAFTTAASKLEKIGYAGSVDSENETALVESKTAKET 179

Query: 680 IDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVD 859
           ID+KEVKRVDHILASLQRKL                 TAE                P  D
Sbjct: 180 IDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAE-AEKGTETQEAAETQAPTAD 238

Query: 860 PIIDQGPAKRMKF 898
           PIIDQGP+KRMKF
Sbjct: 239 PIIDQGPSKRMKF 251


>XP_017623205.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Gossypium arboreum] KHG08969.1 Putative mediator
           of RNA polymerase II transcription subunit 6 [Gossypium
           arboreum]
          Length = 252

 Score =  361 bits (926), Expect = e-121
 Identities = 190/254 (74%), Positives = 199/254 (78%), Gaps = 8/254 (3%)
 Frame = +2

Query: 161 MATPGPGGEGG--------AVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD 316
           MATP PG  GG         +QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP YD
Sbjct: 1   MATP-PGAAGGNFEAPPPPPMQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPLYD 59

Query: 317 WTSNNEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYY 496
           WT NNEQLRMRS+HPLD SQLSKMTG EY+LSEVMEPHLFVIRKQKRDS +KVTPMLAYY
Sbjct: 60  WTCNNEQLRMRSIHPLDLSQLSKMTGMEYMLSEVMEPHLFVIRKQKRDSAEKVTPMLAYY 119

Query: 497 ILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKE 676
           ILDGSIYQAPQLCNVFAAR+GRALYYI KAFTTAASKLEKIGYVD+ENE+  +EPK GKE
Sbjct: 120 ILDGSIYQAPQLCNVFAARVGRALYYILKAFTTAASKLEKIGYVDTENESETVEPKGGKE 179

Query: 677 AIDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAV 856
           AID KEVKRVDHILASLQRKL                 TAE+                AV
Sbjct: 180 AIDFKEVKRVDHILASLQRKLPPAPLPPPFPDGFVPPSTAEV-EKDPENQQIAEPQPSAV 238

Query: 857 DPIIDQGPAKRMKF 898
           DPIIDQGPAKRMKF
Sbjct: 239 DPIIDQGPAKRMKF 252


>XP_016671895.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Gossypium hirsutum]
          Length = 252

 Score =  360 bits (923), Expect = e-120
 Identities = 187/256 (73%), Positives = 199/256 (77%)
 Frame = +2

Query: 131 PSVRSSWELEMATPGPGGEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPF 310
           P V +    E + P P      +QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPF
Sbjct: 4   PPVAAGGNFEASPPPP------MQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPF 57

Query: 311 YDWTSNNEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLA 490
           YDWT NNEQLRMRS+HPLD SQLSKMTG EY+LSEVMEPHLFVIRKQKRDS +KVTPMLA
Sbjct: 58  YDWTCNNEQLRMRSIHPLDLSQLSKMTGMEYMLSEVMEPHLFVIRKQKRDSAEKVTPMLA 117

Query: 491 YYILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVG 670
           YYILDGSIYQAPQLCNVFAAR+GRALYYI KAFTTAASKLEKIGYVD+ENE+  +EPK G
Sbjct: 118 YYILDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETVEPKGG 177

Query: 671 KEAIDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXP 850
           KEAI++KEVKRVDHILASLQRKL                 TAE                 
Sbjct: 178 KEAINIKEVKRVDHILASLQRKLPPAPLPPPFPDGFVPPSTAE-AEKDPENQQTAEPQPS 236

Query: 851 AVDPIIDQGPAKRMKF 898
           AVDPIIDQGPAKRMKF
Sbjct: 237 AVDPIIDQGPAKRMKF 252


>XP_012468480.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X1 [Gossypium raimondii] KJB17037.1
           hypothetical protein B456_002G261900 [Gossypium
           raimondii]
          Length = 252

 Score =  359 bits (921), Expect = e-120
 Identities = 187/256 (73%), Positives = 198/256 (77%)
 Frame = +2

Query: 131 PSVRSSWELEMATPGPGGEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPF 310
           P V +    E   P P      +QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPF
Sbjct: 4   PPVAAGGNFEAPPPPP------MQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPF 57

Query: 311 YDWTSNNEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLA 490
           YDWT NNEQLRMRS+HPLD SQLSKMTG EY+LSEVMEPHLFVIRKQKRDS +KVTPMLA
Sbjct: 58  YDWTCNNEQLRMRSIHPLDLSQLSKMTGMEYMLSEVMEPHLFVIRKQKRDSAEKVTPMLA 117

Query: 491 YYILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVG 670
           YYILDGSIYQAPQLCNVFAAR+GRALYYI KAFTTAASKLEKIGYVD+ENE+  +EPK G
Sbjct: 118 YYILDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETVEPKGG 177

Query: 671 KEAIDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXP 850
           KEAI++KEVKRVDHILASLQRKL                 TAE                 
Sbjct: 178 KEAINIKEVKRVDHILASLQRKLPPAPLPPPFPDGFVPPSTAE-AEKDPENQQTAEPQPS 236

Query: 851 AVDPIIDQGPAKRMKF 898
           AVDPIIDQGPAKRMKF
Sbjct: 237 AVDPIIDQGPAKRMKF 252


>OMO66469.1 Mediator complex, subunit Med6 [Corchorus olitorius]
          Length = 258

 Score =  359 bits (921), Expect = e-120
 Identities = 180/235 (76%), Positives = 189/235 (80%)
 Frame = +2

Query: 194 AVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSVHPLDPS 373
           A+QPPGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYDWT NNEQLRMRS+HPLD +
Sbjct: 24  AMQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRMRSIHPLDIT 83

Query: 374 QLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGSIYQAPQLCNVFAAR 553
            LSKMTG EY+LSEVMEPHLFVIRKQKRDSP+KVTPMLAYYILDGSIYQAPQLCNVFAAR
Sbjct: 84  HLSKMTGLEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLAYYILDGSIYQAPQLCNVFAAR 143

Query: 554 IGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVKEVKRVDHILASLQR 733
           +GRALYYI KAFTTAASKLEKIGYVD+ENE    E K GKE ID KEVKRVDHILASLQR
Sbjct: 144 VGRALYYISKAFTTAASKLEKIGYVDTENEKETSESKGGKETIDFKEVKRVDHILASLQR 203

Query: 734 KLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIIDQGPAKRMKF 898
           KL                 TAE                PA+DPIIDQGPAKRMKF
Sbjct: 204 KLPPAPPPPPFPDGFIPPATAEAEKNPENQQSVVESQPPAIDPIIDQGPAKRMKF 258


>XP_004510328.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X1 [Cicer arietinum]
          Length = 252

 Score =  357 bits (917), Expect = e-119
 Identities = 190/253 (75%), Positives = 199/253 (78%), Gaps = 7/253 (2%)
 Frame = +2

Query: 161 MATPGPGGEGGAV---QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 331
           MA PG G   G V   QPPGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYDWTSNN
Sbjct: 1   MAAPGAGMMEGGVPTAQPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTSNN 60

Query: 332 EQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGS 511
           EQLRMRS+HPLD SQLSKMTGTEYVLSEVMEPHLF++RKQKRDSPDKVTPMLAYYILDGS
Sbjct: 61  EQLRMRSLHPLDLSQLSKMTGTEYVLSEVMEPHLFIMRKQKRDSPDKVTPMLAYYILDGS 120

Query: 512 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGY---VDSENETALLEPK-VGKEA 679
           IYQAPQL NVFAARIGRALYYIQKAFTTAASKLEKIGY   VDSEN+T L EPK   KE 
Sbjct: 121 IYQAPQLSNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSVDSENDTTLPEPKAASKET 180

Query: 680 IDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVD 859
           +D+KE+KRVDHILASLQ KL                 TAE                P+VD
Sbjct: 181 VDIKELKRVDHILASLQHKLPPAPPPPPFPEGYVPPSTAE-TEKGPETQEATESQAPSVD 239

Query: 860 PIIDQGPAKRMKF 898
           PIIDQGPAKRMKF
Sbjct: 240 PIIDQGPAKRMKF 252


>GAU42237.1 hypothetical protein TSUD_351470 [Trifolium subterraneum]
          Length = 247

 Score =  357 bits (916), Expect = e-119
 Identities = 186/248 (75%), Positives = 193/248 (77%), Gaps = 2/248 (0%)
 Frame = +2

Query: 161 MATPGPGGEGGA--VQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNE 334
           MA PG G   G    QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNE
Sbjct: 1   MAAPGGGMLDGVQTAQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNE 60

Query: 335 QLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGSI 514
           QLRMRS HPLD SQLSKMTG EYVLSEVMEPHLF++RKQKRD PDK+T MLAYYILDGSI
Sbjct: 61  QLRMRSQHPLDLSQLSKMTGIEYVLSEVMEPHLFIMRKQKRDGPDKITAMLAYYILDGSI 120

Query: 515 YQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVKE 694
           YQAPQL NVFAARIGRALYYI+KAFTTAASKLEKIGYVDSENET + EPK  KE IDVKE
Sbjct: 121 YQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETPIPEPKAAKETIDVKE 180

Query: 695 VKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIIDQ 874
           +KRVDHILASL RKL                 TAE                P VDPIIDQ
Sbjct: 181 IKRVDHILASLLRKLPPAPAPPPFPEGYVPPSTAE-TEKGPETQEAAEPQAPTVDPIIDQ 239

Query: 875 GPAKRMKF 898
           GP+KRMKF
Sbjct: 240 GPSKRMKF 247


>AGZ15418.1 mediator of RNA polymerase II transcription subunit 6 [Phaseolus
           vulgaris]
          Length = 250

 Score =  355 bits (912), Expect = e-119
 Identities = 191/252 (75%), Positives = 196/252 (77%), Gaps = 6/252 (2%)
 Frame = +2

Query: 161 MATPGPGG---EGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 331
           MAT  PG    EGG    PGTDMTGICFRDQLWLN+ PLDRNLVFDYFALSPFYDWT NN
Sbjct: 1   MAT-APGNQMMEGGPPPLPGTDMTGICFRDQLWLNSLPLDRNLVFDYFALSPFYDWTCNN 59

Query: 332 EQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGS 511
           EQLRMRSVHPLD SQLSKMTGTEY+LSEVMEPHLFVIRKQKRDSPDKVTPMLAYY+LDGS
Sbjct: 60  EQLRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGS 119

Query: 512 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGY---VDSENETALLEPKVGKEAI 682
           IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGY   VDSENETAL+  K  KE I
Sbjct: 120 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAASVDSENETALVGSKTAKETI 179

Query: 683 DVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDP 862
           D+KEVKRVDHILASLQRKL                 TAE                P  DP
Sbjct: 180 DIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAE-AEKGTETQEAAETQAPTADP 238

Query: 863 IIDQGPAKRMKF 898
           IIDQGPAKRMKF
Sbjct: 239 IIDQGPAKRMKF 250


>XP_015889962.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Ziziphus jujuba]
          Length = 248

 Score =  354 bits (909), Expect = e-118
 Identities = 183/249 (73%), Positives = 193/249 (77%), Gaps = 3/249 (1%)
 Frame = +2

Query: 161 MATPGPGGEGG---AVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNN 331
           MA P    EGG   A   PGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYDWT NN
Sbjct: 1   MAMPPVAPEGGGAPAPAQPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNN 60

Query: 332 EQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGS 511
           EQLRMRS+HPLD S LSKMTGTEY+L+EVMEPHLFVIRKQKRD P+KVTPML YY+LDGS
Sbjct: 61  EQLRMRSIHPLDISHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYVLDGS 120

Query: 512 IYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEAIDVK 691
           IYQAPQLCNVFAAR+GRALYYI KAFTTAASKLEKIGYVDSENE+  LE KVGKEAID K
Sbjct: 121 IYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDSENESVPLESKVGKEAIDFK 180

Query: 692 EVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVDPIID 871
           EVKRVDHILASLQRKL                 T E                P VDPI+D
Sbjct: 181 EVKRVDHILASLQRKLPPAPPPPPFPDGYIPPPTTE-AENAPETQQAGEPQQPTVDPIVD 239

Query: 872 QGPAKRMKF 898
           QGPAKRM+F
Sbjct: 240 QGPAKRMRF 248


>XP_007217752.1 hypothetical protein PRUPE_ppa010369mg [Prunus persica] ONI15677.1
           hypothetical protein PRUPE_3G054900 [Prunus persica]
          Length = 252

 Score =  352 bits (904), Expect = e-118
 Identities = 184/253 (72%), Positives = 193/253 (76%), Gaps = 7/253 (2%)
 Frame = +2

Query: 161 MATPG---PGGEGG----AVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDW 319
           MATP    P  EG     AVQPPGTDMTGICF+DQLWLN+YPLDRNLVFDYFA+SPFYDW
Sbjct: 1   MATPPMAPPSMEGTPPPMAVQPPGTDMTGICFKDQLWLNSYPLDRNLVFDYFAISPFYDW 60

Query: 320 TSNNEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYI 499
           T NNEQLR RS+HPLDPS LSKMTGTEY L+EVMEPHLFV RKQKRD P+KVTPML YY+
Sbjct: 61  TCNNEQLRQRSIHPLDPSHLSKMTGTEYSLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYV 120

Query: 500 LDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVGKEA 679
           LDG+IYQAPQLCNVFAARIGRALYYI KAFTTAASKLEKIGYVDSENETA  E KV KE 
Sbjct: 121 LDGTIYQAPQLCNVFAARIGRALYYISKAFTTAASKLEKIGYVDSENETAAFESKVTKET 180

Query: 680 IDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXPAVD 859
           ID KEVKRVDHIL SLQRKL                 TAE                P +D
Sbjct: 181 IDFKEVKRVDHILQSLQRKLPPAPPPPPFPEGYVPAPTAE-AENGPETQQAGEPQQPQMD 239

Query: 860 PIIDQGPAKRMKF 898
           PIIDQGPAKRMKF
Sbjct: 240 PIIDQGPAKRMKF 252


>XP_007024366.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Theobroma cacao] EOY26988.1 RNA polymerase
           transcriptional regulation mediator-related isoform 1
           [Theobroma cacao]
          Length = 257

 Score =  352 bits (904), Expect = e-117
 Identities = 182/256 (71%), Positives = 194/256 (75%)
 Frame = +2

Query: 131 PSVRSSWELEMATPGPGGEGGAVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPF 310
           P   ++   E   P P      +QPPGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPF
Sbjct: 9   PQAAAAGNFEAPPPLP------MQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPF 62

Query: 311 YDWTSNNEQLRMRSVHPLDPSQLSKMTGTEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLA 490
           YDWT NNEQLRM S+HPLD SQLSKMTG EY+LSEVMEP+LFVIRKQKRD P+KVTPMLA
Sbjct: 63  YDWTCNNEQLRMHSIHPLDISQLSKMTGVEYMLSEVMEPNLFVIRKQKRDGPEKVTPMLA 122

Query: 491 YYILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALLEPKVG 670
           YYILDGSIYQAPQLCNVFAAR+GRALYYI KAFTTAASKLEKIGYVD+ENE+   E K G
Sbjct: 123 YYILDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESKGG 182

Query: 671 KEAIDVKEVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXTAEIXXXXXXXXXXXXXXXP 850
           KE ID KEVKRVDHILASLQRKL                 TAE                P
Sbjct: 183 KETIDFKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAE-AEKDPENQQAVETQPP 241

Query: 851 AVDPIIDQGPAKRMKF 898
           A+DPIIDQGPAKRMKF
Sbjct: 242 AIDPIIDQGPAKRMKF 257


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