BLASTX nr result

ID: Glycyrrhiza32_contig00009817 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00009817
         (278 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAQ49644.1 stringent starvation protein B (plasmid) [Methylobact...    47   1e-06

>BAQ49644.1 stringent starvation protein B (plasmid) [Methylobacterium
           aquaticum]
          Length = 594

 Score = 47.4 bits (111), Expect(2) = 1e-06
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
 Frame = -3

Query: 276 RIDEGVKIVLLPGMVPPSSG*TSSCKRQLC----GSTSRCLMQCDSFKSSP--RGS 127
           RIDEGVK+ L  GMVPP SG  +SC+RQLC    G  S    Q  S++ +P  RGS
Sbjct: 296 RIDEGVKVELSLGMVPPLSGQCNSCQRQLCSGGGGRVSGPQYQTKSYRVAPNRRGS 351



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -1

Query: 131 VRTSRRGSEVPGNRNLHF 78
           V  +RRGSE PGNR+LHF
Sbjct: 344 VAPNRRGSEAPGNRSLHF 361


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