BLASTX nr result
ID: Glycyrrhiza32_contig00009366
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00009366
(616 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OMP12970.1 RNA-dependent RNA polymerase, mitoviral [Corchorus ol... 83 1e-15
YP_009049714.1 hypothetical protein (mitochondrion) [Capsicum an... 84 2e-15
XP_006364252.1 PREDICTED: uncharacterized mitochondrial protein ... 82 7e-15
XP_015075355.1 PREDICTED: uncharacterized protein LOC107019350 [... 82 8e-15
AIG89906.1 hypothetical protein (mitochondrion) [Capsicum annuum] 79 2e-14
CDY45483.1 BnaCnng12420D [Brassica napus] 77 5e-13
YP_717161.1 hypothetical protein BrnapMp064 [Brassica napus] YP_... 77 5e-13
YP_004927571.1 orf448 (mitochondrion) [Brassica carinata] AEH435... 77 5e-13
YP_009228112.1 hypothetical protein AYB38_gp36 (mitochondrion) [... 77 5e-13
XP_015159341.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 77 6e-13
AIE42599.1 hypothetical protein RadishMT_p069 (mitochondrion) [R... 74 6e-12
AEX57677.1 hypothetical protein RasatMp046 (mitochondrion) [Raph... 74 6e-12
YP_009049652.1 hypothetical protein (mitochondrion) [Capsicum an... 74 9e-12
ERM93379.1 hypothetical protein AMTR_s05705p00005250, partial [A... 69 2e-11
AGC81676.1 hypothetical protein DCGMS_00160 (mitochondrion) [Rap... 71 7e-11
ERM96674.1 hypothetical protein AMTR_s00001p00272670 [Amborella ... 67 4e-10
XP_003590807.1 50S ribosomal protein L2 [Medicago truncatula] AE... 61 7e-09
ALP00626.1 hypothetical protein (mitochondrion) [Populus tremula... 59 2e-07
NP_660176.1 RNA-dependent RNA polymerase [Ophiostoma mitovirus 3... 57 3e-06
AIS37550.1 RNA-dependent RNA polymerase, partial [Valsa cypri mi... 55 3e-06
>OMP12970.1 RNA-dependent RNA polymerase, mitoviral [Corchorus olitorius]
Length = 258
Score = 82.8 bits (203), Expect = 1e-15
Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +2
Query: 59 GKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLAG-SSITYSVDLKX 235
GKRR+FA+GN+V R+L PLH+WC +VL T+PMDGTFNQT P++RLAG +S+DLK
Sbjct: 125 GKRRLFAVGNYVNQRLLFPLHQWCASVLKTIPMDGTFNQTDPLDRLAGVPGTVHSIDLKS 184
Query: 236 QEASCLVSDWMHWP-GYLIVW 295
VS P GY W
Sbjct: 185 TTDRQTVSFVAGQPLGYYSSW 205
>YP_009049714.1 hypothetical protein (mitochondrion) [Capsicum annuum]
YP_009049730.1 hypothetical protein (mitochondrion)
[Capsicum annuum] AIG90072.1 hypothetical protein
(mitochondrion) [Capsicum annuum] AIG90088.1
hypothetical protein (mitochondrion) [Capsicum annuum]
Length = 481
Score = 84.0 bits (206), Expect = 2e-15
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 9/80 (11%)
Frame = +2
Query: 20 LRLCRLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLA 199
LR R+ Q IEGGGKRR+FAIGN+V R+L P+H W M VL+++PMDGTFNQ P++RL
Sbjct: 137 LRPGRIAQVIEGGGKRRLFAIGNYVKQRLLRPVHDWAMEVLASIPMDGTFNQGGPIDRLC 196
Query: 200 GSSIT---------YSVDLK 232
+ T YS DLK
Sbjct: 197 RWASTQGDRRSLKVYSFDLK 216
>XP_006364252.1 PREDICTED: uncharacterized mitochondrial protein AtMg01110-like
[Solanum tuberosum]
Length = 438
Score = 82.4 bits (202), Expect = 7e-15
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVE--RLAGS 205
RL Q+IEGGGKRRIFAI N++ R+LHP+H W MTVLS+L DGTFNQ P++ RL
Sbjct: 134 RLAQAIEGGGKRRIFAICNYIKQRLLHPVHIWAMTVLSSLKTDGTFNQERPLQYLRLKRP 193
Query: 206 SITYSVDLK 232
YS DLK
Sbjct: 194 KSCYSFDLK 202
>XP_015075355.1 PREDICTED: uncharacterized protein LOC107019350 [Solanum pennellii]
Length = 589
Score = 82.4 bits (202), Expect = 8e-15
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVE--RLAGS 205
RL Q+IEGGGKRRIFAI N++ R+LHP+H W MTVLS+L DGTFNQ P++ RL
Sbjct: 134 RLAQAIEGGGKRRIFAICNYIKQRLLHPVHIWAMTVLSSLKTDGTFNQERPLQYLRLKRP 193
Query: 206 SITYSVDLK 232
YS DLK
Sbjct: 194 KSCYSFDLK 202
>AIG89906.1 hypothetical protein (mitochondrion) [Capsicum annuum]
Length = 244
Score = 79.0 bits (193), Expect = 2e-14
Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVE--RLAGS 205
RL Q+IEGGGKRR FAI N++ R+LHP+H W MTVLS+L DGTFNQ P++ RL
Sbjct: 144 RLAQAIEGGGKRRTFAICNYIKQRLLHPVHIWAMTVLSSLKTDGTFNQERPLQYLRLKRP 203
Query: 206 SITYSVDLK 232
YS D K
Sbjct: 204 KSCYSFDFK 212
>CDY45483.1 BnaCnng12420D [Brassica napus]
Length = 403
Score = 77.0 bits (188), Expect = 5e-13
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLA 199
RL QS+EG GKRR+F IGNW R+L+P+H W M+VL +P DGTF+Q P+ RLA
Sbjct: 80 RLAQSLEGAGKRRLFVIGNWFKQRLLYPVHVWGMSVLRRIPQDGTFHQEGPIHRLA 135
>YP_717161.1 hypothetical protein BrnapMp064 [Brassica napus] YP_004927457.1
orf448 (mitochondrion) [Brassica oleracea]
YP_004927873.1 orf448 (mitochondrion) [Brassica rapa
subsp. oleifera] YP_004927776.1 orf448 (mitochondrion)
[Brassica juncea] BAC98910.1 hypothetical protein
(mitochondrion) [Brassica napus] AEH43447.1 orf448
(mitochondrion) [Brassica rapa subsp. oleifera]
AEH43485.1 orf448 (mitochondrion) [Brassica oleracea]
AEH43671.1 orf448 (mitochondrion) [Brassica juncea]
CBX48374.1 unnamed protein product [Brassica napus]
AHY20356.1 hypothetical protein (mitochondrion)
(mitochondrion) [Brassica juncea var. tumida] AIC83264.1
orf448 (mitochondrion) [Brassica oleracea var. botrytis]
AIZ06202.1 hypothetical protein (mitochondrion)
[Brassica napus] AIZ06277.1 hypothetical protein
(mitochondrion) [Brassica napus] AKD00222.1 hypothetical
protein (mitochondrion) [Brassica napus]
Length = 448
Score = 77.0 bits (188), Expect = 5e-13
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLA 199
RL QS+EG GKRR+F IGNW R+L+P+H W M+VL +P DGTF+Q P+ RLA
Sbjct: 80 RLAQSLEGAGKRRLFVIGNWFKQRLLYPVHVWGMSVLRRIPQDGTFHQEGPIHRLA 135
>YP_004927571.1 orf448 (mitochondrion) [Brassica carinata] AEH43586.1 orf448
(mitochondrion) [Brassica carinata]
Length = 448
Score = 77.0 bits (188), Expect = 5e-13
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLA 199
RL QS+EG GKRR+F IGNW R+L+P+H W M+VL +P DGTF+Q P+ RLA
Sbjct: 80 RLAQSLEGAGKRRLFVIGNWFKQRLLYPVHVWGMSVLRRIPQDGTFHQEGPIHRLA 135
>YP_009228112.1 hypothetical protein AYB38_gp36 (mitochondrion) [Brassica nigra]
AJD85422.1 hypothetical protein BniMp042 (mitochondrion)
[Brassica nigra]
Length = 474
Score = 77.0 bits (188), Expect = 5e-13
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLA 199
RL QS+EG GKRR+F IGNW R+L+P+H W M+VL +P DGTF+Q P+ RLA
Sbjct: 106 RLAQSLEGAGKRRLFVIGNWFKQRLLYPVHVWGMSVLRRIPQDGTFHQEGPIHRLA 161
>XP_015159341.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC102589521 [Solanum tuberosum]
Length = 615
Score = 77.0 bits (188), Expect = 6e-13
Identities = 47/93 (50%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLAG--S 205
RL Q IEGGGKRRIFAI N++ R+L P+HKW M VLS++P DGTF+Q P+ R
Sbjct: 274 RLAQVIEGGGKRRIFAICNYIKQRLLFPVHKWAMKVLSSIPTDGTFDQERPLLRFKSKRK 333
Query: 206 SITYSVDLKXQEASCLVSDWMHWPGYLIVWYSL 304
T+S DLK S WP L V YSL
Sbjct: 334 RQTFSFDLK--------SATDRWP--LSVIYSL 356
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQ 175
RL Q IEGGG RRIFAI N++ +L P+HKW M VLS++P DGTF+Q
Sbjct: 515 RLAQVIEGGGMRRIFAICNYIKQSLLFPVHKWPMKVLSSIPTDGTFDQ 562
>AIE42599.1 hypothetical protein RadishMT_p069 (mitochondrion) [Raphanus
sativus]
Length = 448
Score = 73.9 bits (180), Expect = 6e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLA 199
RL QS+EG GKRR+F IGNW R+L+ +H W M+VL +P DGTF+Q P+ RLA
Sbjct: 80 RLAQSLEGAGKRRLFVIGNWFKQRLLYSVHVWGMSVLRRIPQDGTFHQEGPIHRLA 135
>AEX57677.1 hypothetical protein RasatMp046 (mitochondrion) [Raphanus sativus]
Length = 474
Score = 73.9 bits (180), Expect = 6e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLA 199
RL QS+EG GKRR+F IGNW R+L+ +H W M+VL +P DGTF+Q P+ RLA
Sbjct: 106 RLAQSLEGAGKRRLFVIGNWFKQRLLYSVHVWGMSVLRRIPQDGTFHQEGPIHRLA 161
>YP_009049652.1 hypothetical protein (mitochondrion) [Capsicum annuum]
XP_016552265.1 PREDICTED: uncharacterized protein
LOC107851692 [Capsicum annuum] AIG89859.1 hypothetical
protein (mitochondrion) [Capsicum annuum] AIG90010.1
hypothetical protein (mitochondrion) [Capsicum annuum]
Length = 543
Score = 73.6 bits (179), Expect = 9e-12
Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERL--AGS 205
RL Q+I+GGGKRR+FAI N+V R+L P+HKW M VLS + DGTF+Q P+ +L
Sbjct: 74 RLSQTIQGGGKRRLFAICNYVKQRLLFPVHKWAMEVLSRISTDGTFDQERPLLKLRRGKK 133
Query: 206 SITYSVDLKXQEASCLVSDWMHWPGYLIVWYSL 304
+ YS DLK S WP L V YSL
Sbjct: 134 NECYSFDLK--------SATDRWP--LSVMYSL 156
>ERM93379.1 hypothetical protein AMTR_s05705p00005250, partial [Amborella
trichopoda]
Length = 146
Score = 68.9 bits (167), Expect = 2e-11
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = +2
Query: 11 KSLLRLCRLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPV 187
+ L+ + RL ++EGGGK R+FAIGN+V R++ PLH W M VL+++P DGT++Q AP+
Sbjct: 88 RKLVPIGRLAFTVEGGGKLRMFAIGNYVRQRLIKPLHDWAMKVLASIPNDGTYDQGAPL 146
>AGC81676.1 hypothetical protein DCGMS_00160 (mitochondrion) [Raphanus sativus]
Length = 448
Score = 70.9 bits (172), Expect = 7e-11
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLA 199
RL QS+EG KRR+F IGNW R+L+ +H W M+VL +P DGTF+Q P+ RLA
Sbjct: 80 RLAQSLEGARKRRLFVIGNWFKQRLLYSVHVWGMSVLRRIPQDGTFHQEGPIHRLA 135
>ERM96674.1 hypothetical protein AMTR_s00001p00272670 [Amborella trichopoda]
Length = 229
Score = 67.0 bits (162), Expect = 4e-10
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERLAGSSI 211
RLG +EGGGKRR+FAI N +L WCM VL +PMDGTF+Q AP+ + G +
Sbjct: 158 RLGSKVEGGGKRRVFAIDNHFNQSLLRAPRDWCMRVLKEIPMDGTFDQEAPLCFICG-KV 216
Query: 212 TYSVDLK 232
+S +LK
Sbjct: 217 LHSFELK 223
>XP_003590807.1 50S ribosomal protein L2 [Medicago truncatula] AES61058.1 50S
ribosomal protein L2 [Medicago truncatula]
Length = 94
Score = 60.8 bits (146), Expect = 7e-09
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -1
Query: 469 MKQPVRQTSYFLILGLADPLSISIPVPAVRLALSPQSIAV 350
MKQPVRQTSYF ILGLADPLSISIPVPAVRL + + + +
Sbjct: 1 MKQPVRQTSYFPILGLADPLSISIPVPAVRLDIYGRIVTI 40
>ALP00626.1 hypothetical protein (mitochondrion) [Populus tremula] ALP46558.1
hypothetical protein (mitochondrion) [Populus tremula x
Populus alba]
Length = 166
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Frame = +2
Query: 32 RLGQSIEGGGKRRIFAIGNWVI--PRVLHPLHKWCMTVLSTLPMDGTF 169
RLG + EGGGKRRIFAIGN++ R+L P+H W M VL +PMDG +
Sbjct: 114 RLGCTFEGGGKRRIFAIGNYIYINQRLLKPVHDWLMDVLRGVPMDGWY 161
>NP_660176.1 RNA-dependent RNA polymerase [Ophiostoma mitovirus 3a] CAA06228.1
RNA-dependent RNA polymerase [Ophiostoma mitovirus 3a]
Length = 718
Score = 57.4 bits (137), Expect = 3e-06
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2
Query: 20 LRLCRLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERL 196
L+L +L E GK R+FA+ + + V+ PL+ W + L LPMDGTFNQ AP+ RL
Sbjct: 258 LKLGKLAIKEEAAGKARVFAMADSITQSVMAPLNSWVFSKLKDLPMDGTFNQQAPLNRL 316
>AIS37550.1 RNA-dependent RNA polymerase, partial [Valsa cypri mitovirus]
Length = 176
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +2
Query: 20 LRLCRLGQSIEGGGKRRIFAIGNWVIPRVLHPLHKWCMTVLSTLPMDGTFNQTAPVERL 196
L L RL E GK R+FAI + + V+ PL K ++L LPMDGTFNQ+AP+ RL
Sbjct: 112 LHLGRLSLKSEAAGKIRVFAITDLITQSVMAPLSKVIFSLLKGLPMDGTFNQSAPLTRL 170