BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00008739
         (348 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMO70496.1 hypothetical protein CCACVL1_18874 [Corchorus capsula...    43   1e-06
OMO56897.1 reverse transcriptase [Corchorus capsularis]                43   4e-06
OMO81305.1 reverse transcriptase [Corchorus capsularis]                40   6e-06
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]    53   1e-05

>OMO70496.1 hypothetical protein CCACVL1_18874 [Corchorus capsularis]
          Length = 1441

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 18/25 (72%), Positives = 19/25 (76%)
 Frame = -1

Query: 75  IRDVLHWDWRVRMHHTLREGNFSVD 1
           IRD+LH DW    HHTLREGNFS D
Sbjct: 403 IRDLLHRDWICSFHHTLREGNFSAD 427



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 202 GFWLAWELGFRDIVCYFDSSMALQLVAQGDLLHHLHGPIILE 77
           G  LAWE GFR + C  D+ + L ++   DL  H  G  I +
Sbjct: 361 GLLLAWEEGFRRVECEIDAKVVLDMIKDADLNFHPLGTFIAD 402


>OMO56897.1 reverse transcriptase [Corchorus capsularis]
          Length = 1373

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = -1

Query: 87   LFLSIRDVLHWDWRVRMHHTLREGNFSVD 1
            L   IRD+L  DW    HHTLREGNFSVD
Sbjct: 1302 LIADIRDLLSRDWSCSCHHTLREGNFSVD 1330



 Score = 35.0 bits (79), Expect(2) = 4e-06
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 202  GFWLAWELGFRDIVCYFDSSMALQLVAQGDLLHHLHGPIILE 77
            G  LAW+ GFR+I C  D+ + L L+ + D   +  G +I +
Sbjct: 1264 GLCLAWDEGFREIECEVDAKVVLDLIKEADTAFNPLGALIAD 1305


>OMO81305.1 reverse transcriptase [Corchorus capsularis]
          Length = 1538

 Score = 39.7 bits (91), Expect(2) = 6e-06
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -1

Query: 87   LFLSIRDVLHWDWRVRMHHTLREGNFSVD 1
            L + IR +LH +WR ++ HT REGNF  D
Sbjct: 1467 LLIDIRQLLHREWRCKLQHTYREGNFCAD 1495



 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -3

Query: 205  RGFWLAWELGFRDIVCYFDSSMALQLVAQGDLLHHLHGPIILE 77
            +G  +AW   +RDI+C  D+ +A+ L+  GD   H  G ++++
Sbjct: 1428 QGLLVAWNCSYRDIICETDALIAIDLIKNGDAKFHPLGYLLID 1470


>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
 Frame = -1

Query: 282 DGSWIARYLGSLGATDILKAELVATFVDSGWLGSWV-----------SVTLCAILTRPWR 136
           DG+WI  + G+LG T+IL AEL+A     G L +W            S T   ++T P  
Sbjct: 593 DGAWIHGFFGNLGVTNILHAELMAIL--KGLLLAWELNIKDLLCYSDSATAIKLITEPVD 650

Query: 135 YNW*HKEISFITCTVQLFLSIRDVLHWDWRVRMHHTLREGNFSVD 1
             W H           +  +I+D+L+ DW+V + HT REGN   D
Sbjct: 651 V-WHHY--------AAILNNIKDILNRDWQVSIFHTFREGNACAD 686