BLASTX nr result
ID: Glycyrrhiza32_contig00008009
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00008009
(1481 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 791 0.0
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 776 0.0
YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.... 752 0.0
YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC1003... 752 0.0
YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 730 0.0
YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 730 0.0
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 730 0.0
AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis la... 729 0.0
AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 721 0.0
AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 721 0.0
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 714 0.0
AJE71946.1 RNA polymerase beta'' subunit (plastid) [Baptisia bra... 706 0.0
YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medic... 705 0.0
YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] AC... 702 0.0
YP_009141275.1 RNA polymerase beta' subunit (chloroplast) [Lathy... 702 0.0
YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medi... 701 0.0
AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago... 700 0.0
AJE72514.1 RNA polymerase beta'' subunit (plastid) [Medicago lup... 699 0.0
AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 697 0.0
AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 697 0.0
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 791 bits (2043), Expect = 0.0
Identities = 400/412 (97%), Positives = 401/412 (97%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
IQNSLGPLGIALPISNFYSFYRLITHNQISIT KETFQVIKYYLMDENEK
Sbjct: 977 IQNSLGPLGIALPISNFYSFYRLITHNQISITKNLKNLQLDKLKETFQVIKYYLMDENEK 1036
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG
Sbjct: 1037 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1096
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1097 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 1156
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1157 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1216
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1217 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1276
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1277 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1336
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFFISKNLCDTSEI 245
RIMHRSRSRQHNKITLEK+NNFFEVEIRNILFHHRKLFDFFISKNLCDTSEI
Sbjct: 1337 RIMHRSRSRQHNKITLEKQNNFFEVEIRNILFHHRKLFDFFISKNLCDTSEI 1388
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 776 bits (2005), Expect = 0.0
Identities = 394/412 (95%), Positives = 395/412 (95%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
IQNSLGPLGIALPISNFYSFYRLITHNQISIT KETFQVIKYYLMDENEK
Sbjct: 977 IQNSLGPLGIALPISNFYSFYRLITHNQISITKNLKNLQLDKLKETFQVIKYYLMDENEK 1036
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
IYKPDLYNNIVLNPFHLNWYFLNHN CEKTFTIISLGQFICENICIAQTKNGPHLKLKSG
Sbjct: 1037 IYKPDLYNNIVLNPFHLNWYFLNHNYCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1096
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQMDSVIIRSANPYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1097 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1156
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1157 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1216
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRAERTGRALEEAICYRA
Sbjct: 1217 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRA 1276
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1277 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1336
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFFISKNLCDTSEI 245
RIMH SRSRQ NKITLEKK NFFEVEIRNILFHHRKLFDFF SKNLCDTSEI
Sbjct: 1337 RIMHHSRSRQDNKITLEKKKNFFEVEIRNILFHHRKLFDFFNSKNLCDTSEI 1388
>YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.1 RpoC2
(chloroplast) [Wisteria sinensis]
Length = 1367
Score = 752 bits (1942), Expect = 0.0
Identities = 380/409 (92%), Positives = 389/409 (95%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGPLGIAL I+NFYSFYRLITHNQISIT ETFQVIKYY MDENEK
Sbjct: 962 IKNSLGPLGIALQIANFYSFYRLITHNQISITKNLQLDKLK---ETFQVIKYYFMDENEK 1018
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
IYKPDLY+NI+LNPFHLNWYFLNHN EKTFTIISLGQFICENICIAQTKNGPHLK KSG
Sbjct: 1019 IYKPDLYSNIILNPFHLNWYFLNHNYYEKTFTIISLGQFICENICIAQTKNGPHLKQKSG 1078
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QV+TVQ+DSVIIRSANPYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1079 QVITVQIDSVIIRSANPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1138
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1139 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1198
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1199 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1258
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGF+
Sbjct: 1259 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFQ 1318
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFFISKNLCDT 254
+IMH SRSRQHNKITLEKK N FEVEIRNILFHHRKLFDFFISKNLCDT
Sbjct: 1319 KIMHHSRSRQHNKITLEKKKNLFEVEIRNILFHHRKLFDFFISKNLCDT 1367
>YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC10039.1 RpoC2
(chloroplast) [Wisteria floribunda]
Length = 1367
Score = 752 bits (1942), Expect = 0.0
Identities = 380/409 (92%), Positives = 389/409 (95%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGPLGIAL I+NFYSFYRLITHNQISIT ETFQVIKYY MDENEK
Sbjct: 962 IKNSLGPLGIALQIANFYSFYRLITHNQISITKNLQLDKLK---ETFQVIKYYFMDENEK 1018
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
IYKPDLY+NI+LNPFHLNWYFLNHN EKTFTIISLGQFICENICIAQTKNGPHLK KSG
Sbjct: 1019 IYKPDLYSNIILNPFHLNWYFLNHNYYEKTFTIISLGQFICENICIAQTKNGPHLKQKSG 1078
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QV+TVQ+DSVIIRSANPYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1079 QVITVQIDSVIIRSANPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1138
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1139 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1198
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1199 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1258
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGF+
Sbjct: 1259 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFQ 1318
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFFISKNLCDT 254
+IMH SRSRQHNKITLEKK N FEVEIRNILFHHRKLFDFFISKNLCDT
Sbjct: 1319 KIMHHSRSRQHNKITLEKKKNLFEVEIRNILFHHRKLFDFFISKNLCDT 1367
>YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42736.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78900.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1372
Score = 730 bits (1885), Expect = 0.0
Identities = 371/401 (92%), Positives = 379/401 (94%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGPLGIAL I+NFYSF RLITHNQISIT ETFQVIKYYLMDENE
Sbjct: 969 IKNSLGPLGIALQIANFYSFSRLITHNQISITKNLQLDKLK---ETFQVIKYYLMDENET 1025
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
I+KPDLY+NIVLNPFHLNWYFL+HN CEKTFTIISLGQFICENICIAQTKNGPHLKLKSG
Sbjct: 1026 IFKPDLYSNIVLNPFHLNWYFLHHNFCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1085
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQ DSVIIRSA PYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1086 QVLTVQKDSVIIRSAKPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1145
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1146 EQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1205
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1206 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1265
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1266 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1325
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
RIMHRSRS Q NKITLEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1326 RIMHRSRSGQQNKITLEKKKNLFEVEIRNLLFHHRKLFDFF 1366
>YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus]
AMQ99218.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus mongholicus]
Length = 1376
Score = 730 bits (1885), Expect = 0.0
Identities = 371/401 (92%), Positives = 379/401 (94%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGPLGIAL I+NFYSF RLITHNQISIT ETFQVIKYYLMDENE
Sbjct: 973 IKNSLGPLGIALQIANFYSFSRLITHNQISITKNLQLDKLK---ETFQVIKYYLMDENET 1029
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
I+KPDLY+NIVLNPFHLNWYFL+HN CEKTFTIISLGQFICENICIAQTKNGPHLKLKSG
Sbjct: 1030 IFKPDLYSNIVLNPFHLNWYFLHHNFCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1089
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQ DSVIIRSA PYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1090 QVLTVQKDSVIIRSAKPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1149
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1150 EQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1209
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1210 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1269
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1270 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1329
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
RIMHRSRS Q NKITLEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1330 RIMHRSRSGQQNKITLEKKKNLFEVEIRNLLFHHRKLFDFF 1370
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 730 bits (1884), Expect = 0.0
Identities = 369/397 (92%), Positives = 378/397 (95%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGPLGIAL I+NFYSFYR ITHNQISIT ETFQVIKYYLMDENEK
Sbjct: 978 IKNSLGPLGIALQIANFYSFYRSITHNQISITKNLQLDKFK---ETFQVIKYYLMDENEK 1034
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
I KPDLY+NIVLNPFHLNWYFL+HN CEKTFTIISLGQFICENICIAQTKNGPHLKLKSG
Sbjct: 1035 ILKPDLYSNIVLNPFHLNWYFLHHNYCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1094
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQMDSVIIRSANPYLATPGATIHGHYGEIL+EGDI VTFIYEKSRSGDITQGLPKV
Sbjct: 1095 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILYEGDIFVTFIYEKSRSGDITQGLPKV 1154
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1155 EQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1214
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1215 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1274
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1275 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1334
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 290
RIMHRSRSRQHNKITLEKK N FEVEIRN+LFHH+K+
Sbjct: 1335 RIMHRSRSRQHNKITLEKKKNLFEVEIRNLLFHHKKI 1371
>AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis lambertii]
Length = 1368
Score = 729 bits (1883), Expect = 0.0
Identities = 370/401 (92%), Positives = 379/401 (94%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGPLGIAL I+NFYSF RLITHNQISIT ETFQVIKYYLMDENEK
Sbjct: 965 IKNSLGPLGIALQIANFYSFSRLITHNQISITKNLQLDKLK---ETFQVIKYYLMDENEK 1021
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
I+KPDLY+NIVLNPFHLNWYFL+HN CEKT TIISLGQF+CENICIAQTKNGPHLKLKSG
Sbjct: 1022 IFKPDLYSNIVLNPFHLNWYFLHHNFCEKTLTIISLGQFLCENICIAQTKNGPHLKLKSG 1081
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQ DSVIIRSANPYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1082 QVLTVQKDSVIIRSANPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1141
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1142 EQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1201
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1202 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1261
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1262 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1321
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
RI HRSRS Q NKITLEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1322 RITHRSRSGQQNKITLEKKKNLFEVEIRNLLFHHRKLFDFF 1362
>AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus canadensis]
Length = 1372
Score = 721 bits (1861), Expect = 0.0
Identities = 365/401 (91%), Positives = 378/401 (94%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGP+GIAL I+NFYSF RLITHNQISIT ETFQVIKYYLMDENE
Sbjct: 969 IKNSLGPVGIALQIANFYSFSRLITHNQISITKNLQLDKLK---ETFQVIKYYLMDENET 1025
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
I+KPDLY+NIVLNPFHLNWYFL++N CEKT TIISLGQFICENICIAQTKNGPHLKLKSG
Sbjct: 1026 IFKPDLYSNIVLNPFHLNWYFLHNNFCEKTLTIISLGQFICENICIAQTKNGPHLKLKSG 1085
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQ DS+IIRSA PYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1086 QVLTVQKDSLIIRSAKPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1145
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILE+RSIDSISMNLEKRIDAWNEC+TRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1146 EQILEIRSIDSISMNLEKRIDAWNECVTRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1205
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1206 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1265
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1266 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1325
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
RIMHRSRS Q NKI+LEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1326 RIMHRSRSGQQNKISLEKKKNLFEVEIRNLLFHHRKLFDFF 1366
>AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus crassicarpus]
Length = 1374
Score = 721 bits (1860), Expect = 0.0
Identities = 365/401 (91%), Positives = 376/401 (93%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGP+GIAL I+NFYSF RLITHNQIS T ETFQVIKYYLMDENE
Sbjct: 971 IKNSLGPVGIALQIANFYSFSRLITHNQISRTKNLQLDKLK---ETFQVIKYYLMDENET 1027
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
I+KPDLY+NIVLNPFHLNWYFL+HN CEKT TIISLGQFICENICIAQTKNGPH KLKSG
Sbjct: 1028 IFKPDLYSNIVLNPFHLNWYFLHHNFCEKTLTIISLGQFICENICIAQTKNGPHFKLKSG 1087
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQ DSVIIRSA PYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1088 QVLTVQKDSVIIRSAKPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1147
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
E+ILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY
Sbjct: 1148 EKILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 1207
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEA+CYRA
Sbjct: 1208 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAVCYRA 1267
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1268 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1327
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
RIMHRSRS Q NKITLEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1328 RIMHRSRSGQQNKITLEKKKNLFEVEIRNLLFHHRKLFDFF 1368
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 714 bits (1844), Expect = 0.0
Identities = 363/399 (90%), Positives = 375/399 (93%)
Frame = -2
Query: 1474 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1295
NSLGPLGIAL ++NFYS YRLITHNQI+I E FQVIKYYLMDENEKI+
Sbjct: 976 NSLGPLGIALQVANFYSLYRLITHNQIAIIKNLQLDKLK---EIFQVIKYYLMDENEKIF 1032
Query: 1294 KPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQV 1115
KPDL +NIVLNPFHLNWYFL+H CEKTFTIISLGQFICENICIAQ KNGPHLKLKSGQV
Sbjct: 1033 KPDLDSNIVLNPFHLNWYFLHHYYCEKTFTIISLGQFICENICIAQMKNGPHLKLKSGQV 1092
Query: 1114 LTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQ 935
LTVQMDSVIIRSANPYLATPGATIHGHYGEIL++GDILVTFIYEKSRSGDITQGLPKVEQ
Sbjct: 1093 LTVQMDSVIIRSANPYLATPGATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVEQ 1152
Query: 934 ILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 755
ILE+RS+DSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS
Sbjct: 1153 ILEIRSVDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 1212
Query: 754 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 575
QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL
Sbjct: 1213 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 1272
Query: 574 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 395
LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI
Sbjct: 1273 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 1332
Query: 394 MHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
+HR RSRQHNKITLEKK FEVEIRN+LFHHRKLFDFF
Sbjct: 1333 IHRLRSRQHNKITLEKK-KLFEVEIRNLLFHHRKLFDFF 1370
>AJE71946.1 RNA polymerase beta'' subunit (plastid) [Baptisia bracteata]
AJE72372.1 RNA polymerase beta'' subunit (plastid)
[Baptisia alba]
Length = 1383
Score = 706 bits (1822), Expect = 0.0
Identities = 359/412 (87%), Positives = 382/412 (92%), Gaps = 1/412 (0%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I+NSLGPLGIAL ++N YSF+ LITHNQISIT ETFQV K+YLMDENE+
Sbjct: 979 IKNSLGPLGIALQVANLYSFFCLITHNQISITTNLQLDKVK---ETFQVFKHYLMDENER 1035
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
IYKPDL +NIVLNPFHLNW+F +HN CEKTFTIISLGQF+CEN+CIAQTKNGPHLK SG
Sbjct: 1036 IYKPDLCSNIVLNPFHLNWHFFHHNYCEKTFTIISLGQFLCENVCIAQTKNGPHLK--SG 1093
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QVLTVQ+DSV+IRSANPYLATPGAT+HGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKV
Sbjct: 1094 QVLTVQIDSVVIRSANPYLATPGATVHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKV 1153
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQ+LEVRSIDSISMNLEK++D WNE ITRILGIPWGFLIGAELTI QSRISLVNKIQKVY
Sbjct: 1154 EQVLEVRSIDSISMNLEKKVDTWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVY 1213
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRAERTGRALEEAICYRA
Sbjct: 1214 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRA 1273
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
+LLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1274 ILLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1333
Query: 400 RIMHRSRSRQHNKITLE-KKNNFFEVEIRNILFHHRKLFDFFISKNLCDTSE 248
RIMH RSRQHNKITLE KKNN FE E+R+ILFHHR++FDFFISKNLCDTSE
Sbjct: 1334 RIMH--RSRQHNKITLETKKNNVFEGEMRDILFHHREVFDFFISKNLCDTSE 1383
>YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medicago hybrida]
YP_009141687.1 RNA polymerase beta' subunit (chloroplast)
[Medicago papillosa] AIL56137.1 RNA polymerase beta'
subunit (chloroplast) [Medicago hybrida] AIL56212.1 RNA
polymerase beta' subunit (chloroplast) [Medicago
papillosa] AMC32363.1 RNA polymerase beta'' subunit
(chloroplast) [Medicago sativa] ANS57907.1 RNA polymerase
beta' subunit (chloroplast) [Medicago sativa]
Length = 1370
Score = 705 bits (1820), Expect = 0.0
Identities = 359/399 (89%), Positives = 372/399 (93%)
Frame = -2
Query: 1474 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1295
NSLGPLGIA + NFYS YRLITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 973 NSLGPLGIARQVGNFYSLYRLITHNQISIMKNFQLDKIT---EIFQVIKYYLMDENDKIF 1029
Query: 1294 KPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQV 1115
KPDL +NIVLNPFHLNWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV
Sbjct: 1030 KPDLDSNIVLNPFHLNWYFLHHYDCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQV 1089
Query: 1114 LTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQ 935
+TVQMDSVIIRSANPYLATPGATIHGHYGEIL++GDILVTFIYEKSRSGDITQGLPKVEQ
Sbjct: 1090 ITVQMDSVIIRSANPYLATPGATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVEQ 1149
Query: 934 ILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 755
ILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS
Sbjct: 1150 ILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 1209
Query: 754 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 575
QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL
Sbjct: 1210 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 1269
Query: 574 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 395
LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI
Sbjct: 1270 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 1329
Query: 394 MHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
MHRSRS Q+NKITL+KK FEVEIRN+LFHHRKLFD F
Sbjct: 1330 MHRSRSTQYNKITLKKK-KLFEVEIRNLLFHHRKLFDSF 1367
>YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] ACH41072.1 RNA
polymerase beta' subunit (chloroplast) [Cicer arietinum]
Length = 1376
Score = 702 bits (1813), Expect = 0.0
Identities = 356/400 (89%), Positives = 370/400 (92%)
Frame = -2
Query: 1477 QNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKI 1298
+NSLGPLGIAL ++N+YSFYRLITHNQ+SIT E V+KYYLMDEN+KI
Sbjct: 974 KNSLGPLGIALQVANYYSFYRLITHNQVSITNNLQLDKLI---EICHVMKYYLMDENDKI 1030
Query: 1297 YKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQ 1118
+KPDL NIVLNPFHLNWYFL+HN EKT TIISLGQFICENICI Q KN PHLKLKSGQ
Sbjct: 1031 FKPDLSKNIVLNPFHLNWYFLHHNYFEKTLTIISLGQFICENICITQKKNEPHLKLKSGQ 1090
Query: 1117 VLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVE 938
VLTVQMDSVIIRSANPYLATPGATIHGHYGEIL EGDILVTFIYEKSRSGDITQGLPKVE
Sbjct: 1091 VLTVQMDSVIIRSANPYLATPGATIHGHYGEILDEGDILVTFIYEKSRSGDITQGLPKVE 1150
Query: 937 QILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYR 758
QILE+RSIDSISMNLEKRIDAWNECI RILGIPWGFLIGAELTIAQSRISLVNKIQKVYR
Sbjct: 1151 QILEIRSIDSISMNLEKRIDAWNECIPRILGIPWGFLIGAELTIAQSRISLVNKIQKVYR 1210
Query: 757 SQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAL 578
SQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAL
Sbjct: 1211 SQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAL 1270
Query: 577 LLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKR 398
LLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IPVGTGFKR
Sbjct: 1271 LLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKR 1330
Query: 397 IMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
IMHRSRSRQHNKITL+KK FEVEIRN+L HHRKLFDF+
Sbjct: 1331 IMHRSRSRQHNKITLKKKKKLFEVEIRNLLLHHRKLFDFY 1370
>YP_009141275.1 RNA polymerase beta' subunit (chloroplast) [Lathyrus clymenum]
AIL55800.1 RNA polymerase beta' subunit (chloroplast)
[Lathyrus clymenum]
Length = 1374
Score = 702 bits (1811), Expect = 0.0
Identities = 357/398 (89%), Positives = 369/398 (92%)
Frame = -2
Query: 1474 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1295
NS GPLGIAL ++NFYS Y LITHNQISI E FQVIKYYLMDENEKI
Sbjct: 975 NSFGPLGIALQVANFYSLYHLITHNQISIIKNLQLDKFT---EIFQVIKYYLMDENEKIC 1031
Query: 1294 KPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQV 1115
KPDLY+NIVLNPFHLNW+FL+H SCEKTFTIISLGQ ICENICIAQ KNGPHLKLKSGQV
Sbjct: 1032 KPDLYSNIVLNPFHLNWFFLHHFSCEKTFTIISLGQLICENICIAQMKNGPHLKLKSGQV 1091
Query: 1114 LTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQ 935
+TVQMDSVIIRSANPYLATPGATIHGHYGEIL +GDILVTFIYEKSRSGDITQGLPKVEQ
Sbjct: 1092 ITVQMDSVIIRSANPYLATPGATIHGHYGEILSQGDILVTFIYEKSRSGDITQGLPKVEQ 1151
Query: 934 ILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 755
I E+RSIDSISMNLEKRIDAWNECIT+ILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS
Sbjct: 1152 IFEIRSIDSISMNLEKRIDAWNECITKILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 1211
Query: 754 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 575
QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL
Sbjct: 1212 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 1271
Query: 574 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 395
LG+TKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI
Sbjct: 1272 LGVTKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 1331
Query: 394 MHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDF 281
MHRSRSRQHNKIT +KK FEVEIRN+ FHHRKLFDF
Sbjct: 1332 MHRSRSRQHNKITRKKK--LFEVEIRNLWFHHRKLFDF 1367
>YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medicago falcata]
AOG66214.1 RNA polymerase beta'' subunit (chloroplast)
[Medicago sativa] APC60490.1 RNA polymerase beta''
subunit (chloroplast) [Medicago falcata]
Length = 1374
Score = 701 bits (1810), Expect = 0.0
Identities = 358/399 (89%), Positives = 371/399 (92%)
Frame = -2
Query: 1474 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1295
NSLGPLGIA + NF S YRLITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 977 NSLGPLGIARQVGNFDSLYRLITHNQISIMKNFQLDKIT---EIFQVIKYYLMDENDKIF 1033
Query: 1294 KPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQV 1115
KPDL +NIVLNPFHLNWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV
Sbjct: 1034 KPDLDSNIVLNPFHLNWYFLHHYDCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQV 1093
Query: 1114 LTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQ 935
+TVQMDSVIIRSANPYLATPGATIHGHYGEIL++GDILVTFIYEKSRSGDITQGLPKVEQ
Sbjct: 1094 ITVQMDSVIIRSANPYLATPGATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVEQ 1153
Query: 934 ILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 755
ILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS
Sbjct: 1154 ILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 1213
Query: 754 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 575
QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL
Sbjct: 1214 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 1273
Query: 574 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 395
LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI
Sbjct: 1274 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 1333
Query: 394 MHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
MHRSRS Q+NKITL+KK FEVEIRN+LFHHRKLFD F
Sbjct: 1334 MHRSRSTQYNKITLKKK-KLFEVEIRNLLFHHRKLFDSF 1371
>AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 1370
Score = 700 bits (1806), Expect = 0.0
Identities = 357/399 (89%), Positives = 370/399 (92%)
Frame = -2
Query: 1474 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1295
NSLGPLGIA + NFYS YRLITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 973 NSLGPLGIARQVGNFYSLYRLITHNQISIMKNFQLDKIT---EIFQVIKYYLMDENDKIF 1029
Query: 1294 KPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQV 1115
KPDL +NIVLNPFHLNWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV
Sbjct: 1030 KPDLDSNIVLNPFHLNWYFLHHYYCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQV 1089
Query: 1114 LTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQ 935
+TVQMDSVIIRSANPYLATP ATIHGHYGEIL++GDILVTFIYEKSRSGDITQGLPKVE+
Sbjct: 1090 ITVQMDSVIIRSANPYLATPEATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVER 1149
Query: 934 ILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 755
ILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS
Sbjct: 1150 ILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 1209
Query: 754 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 575
QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL
Sbjct: 1210 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 1269
Query: 574 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 395
LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI
Sbjct: 1270 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 1329
Query: 394 MHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
MHRSRSRQ+NKITL KK FEVEIRN+LFHHR LFD F
Sbjct: 1330 MHRSRSRQYNKITL-KKEKLFEVEIRNLLFHHRNLFDSF 1367
>AJE72514.1 RNA polymerase beta'' subunit (plastid) [Medicago lupulina]
Length = 1368
Score = 699 bits (1803), Expect = 0.0
Identities = 355/399 (88%), Positives = 371/399 (92%)
Frame = -2
Query: 1480 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1301
I NSLGPLGIA + NF+S YRLITHNQISI E FQVIKYYLMDEN+K
Sbjct: 969 INNSLGPLGIARQVGNFFSLYRLITHNQISIMKNFQLDKIT---EIFQVIKYYLMDENDK 1025
Query: 1300 IYKPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSG 1121
I+KPDL +NIVLNPFHLNWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSG
Sbjct: 1026 IFKPDLDSNIVLNPFHLNWYFLHHYYCEKTFTIISLGQFICENICIAKMKNGPHLKLKSG 1085
Query: 1120 QVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKV 941
QV+TVQMDSVIIRSANPYL TPGATIHGHYGEIL++GDILVTFIYEKSRS DITQGLPKV
Sbjct: 1086 QVITVQMDSVIIRSANPYLVTPGATIHGHYGEILYQGDILVTFIYEKSRSSDITQGLPKV 1145
Query: 940 EQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVY 761
EQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISL+NKIQKVY
Sbjct: 1146 EQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLLNKIQKVY 1205
Query: 760 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 581
RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA
Sbjct: 1206 RSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRA 1265
Query: 580 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 401
LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK
Sbjct: 1266 LLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 1325
Query: 400 RIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFD 284
RIMHRSRSRQ+NKITL+KK FEVEIRN+LFHHRKLF+
Sbjct: 1326 RIMHRSRSRQYNKITLKKK-KLFEVEIRNLLFHHRKLFE 1363
>AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
Length = 1370
Score = 697 bits (1800), Expect = 0.0
Identities = 356/399 (89%), Positives = 369/399 (92%)
Frame = -2
Query: 1474 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1295
NSLGPLGIA + NFYS Y LITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 973 NSLGPLGIARQVGNFYSLYHLITHNQISIMKNFQLDKIT---EIFQVIKYYLMDENDKIF 1029
Query: 1294 KPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQV 1115
KPDL +NIVLNPFHLNWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV
Sbjct: 1030 KPDLDSNIVLNPFHLNWYFLHHYYCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQV 1089
Query: 1114 LTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQ 935
+TVQMDSVIIRSANPYLATP ATIHGHYGEIL++GDILVTFIYEKSRS DITQGLPKVEQ
Sbjct: 1090 ITVQMDSVIIRSANPYLATPEATIHGHYGEILYQGDILVTFIYEKSRSSDITQGLPKVEQ 1149
Query: 934 ILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 755
ILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS
Sbjct: 1150 ILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 1209
Query: 754 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 575
QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL
Sbjct: 1210 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 1269
Query: 574 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 395
LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI
Sbjct: 1270 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 1329
Query: 394 MHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
MHRSRSRQ+NKITL+KK FEVEIRN+LFHHR LFD F
Sbjct: 1330 MHRSRSRQYNKITLKKK-KLFEVEIRNLLFHHRNLFDSF 1367
>AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
AFR60049.1 RNA polymerase beta'' subunit (plastid)
[Medicago truncatula]
Length = 1370
Score = 697 bits (1800), Expect = 0.0
Identities = 356/399 (89%), Positives = 369/399 (92%)
Frame = -2
Query: 1474 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1295
NSLGPLGIA + NFYS Y LITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 973 NSLGPLGIARQVGNFYSLYHLITHNQISIMKNFQLDKIT---EIFQVIKYYLMDENDKIF 1029
Query: 1294 KPDLYNNIVLNPFHLNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQV 1115
KPDL +NIVLNPFHLNWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV
Sbjct: 1030 KPDLDSNIVLNPFHLNWYFLHHYYCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQV 1089
Query: 1114 LTVQMDSVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQ 935
+TVQMDSVIIRSANPYLATP ATIHGHYGEIL++GDILVTFIYEKSRS DITQGLPKVEQ
Sbjct: 1090 ITVQMDSVIIRSANPYLATPEATIHGHYGEILYQGDILVTFIYEKSRSSDITQGLPKVEQ 1149
Query: 934 ILEVRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 755
ILE+RSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS
Sbjct: 1150 ILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRS 1209
Query: 754 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 575
QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL
Sbjct: 1210 QGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALL 1269
Query: 574 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 395
LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI
Sbjct: 1270 LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI 1329
Query: 394 MHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 278
MHRSRSRQ+NKITL+KK FEVEIRN+LFHHR LFD F
Sbjct: 1330 MHRSRSRQYNKITLKKK-KLFEVEIRNLLFHHRNLFDSF 1367