BLASTX nr result
ID: Glycyrrhiza32_contig00001698
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00001698
(571 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_002720156.1 ORF126 [Jatropha curcas] YP_002720173.1 ORF126 [J... 122 2e-32
YP_009040365.1 hypothetical protein [Hyoscyamus niger] AGU46513.... 61 6e-14
YP_004891653.1 unnamed protein product (chloroplast) [Nicotiana ... 61 6e-14
XP_002888391.1 hypothetical protein ARALYDRAFT_894061 [Arabidops... 66 3e-11
YP_004891654.1 unnamed protein product (chloroplast) [Nicotiana ... 56 4e-11
CDY45543.1 BnaCnng13020D [Brassica napus] CDY19675.1 BnaC09g2931... 65 4e-10
CDY72580.1 BnaCnng78410D, partial [Brassica napus] 48 5e-10
AKF01116.1 hypothetical chloroplast RF15 (chloroplast) [Bactris ... 61 5e-09
AKF01040.1 hypothetical chloroplast RF15 (chloroplast) [Attalea ... 60 1e-08
YP_001109573.1 hypothetical protein Poptr_cp096 [Populus trichoc... 55 3e-07
>YP_002720156.1 ORF126 [Jatropha curcas] YP_002720173.1 ORF126 [Jatropha curcas]
ACN72735.1 ORF126 (chloroplast) [Jatropha curcas]
ACN72751.1 ORF126 (chloroplast) [Jatropha curcas]
Length = 126
Score = 122 bits (305), Expect = 2e-32
Identities = 62/92 (67%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Frame = -1
Query: 457 PPPICFNRNHTGVD*YDTIETSVKMPNHKPTDKVHYIVRFRDWRLTHSMPLVPDIPPHGY 278
PP ICFNRN+T V DTIETS KMP PTDKVHYIVRFRDWRLTHS+ L D+P +
Sbjct: 15 PPSICFNRNYTRV--VDTIETSGKMPARNPTDKVHYIVRFRDWRLTHSVTLALDVPKRKW 72
Query: 277 -SRGRVNSIIDAC*HSNLSSPFRAYPKRKRIL 185
GRVNSIID C HS+L SPFRAYPK +L
Sbjct: 73 VLSGRVNSIIDVCWHSSLPSPFRAYPKENPVL 104
>YP_009040365.1 hypothetical protein [Hyoscyamus niger] AGU46513.1 hypothetical
protein (plastid) [Hyoscyamus niger]
Length = 115
Score = 60.8 bits (146), Expect(2) = 6e-14
Identities = 29/36 (80%), Positives = 31/36 (86%), Gaps = 3/36 (8%)
Frame = -2
Query: 543 NWNKFGSGSKNIGDLLYLMNGESVLKSSA---PPLY 445
NWNKFGSGS+N+GDLLYLMNGES LKSSA PP Y
Sbjct: 24 NWNKFGSGSRNLGDLLYLMNGESALKSSALHPPPEY 59
Score = 43.9 bits (102), Expect(2) = 6e-14
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = -3
Query: 458 PPPYMLQQKSHRGRLI*YNRNLC*NAQP*TNG*STLHSPF*GLATYPFNAFGTRHS 291
PP YMLQQ+SH+GRL + P N +H GLATYPF+ FGT S
Sbjct: 56 PPEYMLQQESHKGRLETSGK------MPARNPADKVHYIVEGLATYPFSDFGTGRS 105
>YP_004891653.1 unnamed protein product (chloroplast) [Nicotiana undulata]
YP_004891682.1 unnamed protein product (chloroplast)
[Nicotiana undulata] CAA77388.1 hypothetical protein
(chloroplast) [Nicotiana tabacum] CAA77405.1
hypothetical protein (chloroplast) [Nicotiana tabacum]
BAE46700.1 hypothetical protein (chloroplast) [Nicotiana
sylvestris] BAE46730.1 hypothetical protein
(chloroplast) [Nicotiana sylvestris] BAE48049.1
hypothetical protein (chloroplast) [Nicotiana
tomentosiformis] BAE48079.1 hypothetical protein
(chloroplast) [Nicotiana tomentosiformis] AEO95591.1
hypothetical protein (chloroplast) [Nicotiana undulata]
AEO95639.1 hypothetical protein (chloroplast) [Nicotiana
undulata] AEO95701.1 hypothetical protein [synthetic
construct] AEO95747.1 hypothetical protein [synthetic
construct] prf||1211235CC ORF 115
Length = 115
Score = 60.8 bits (146), Expect(2) = 6e-14
Identities = 29/36 (80%), Positives = 31/36 (86%), Gaps = 3/36 (8%)
Frame = -2
Query: 543 NWNKFGSGSKNIGDLLYLMNGESVLKSSA---PPLY 445
NWNKFGSGS+N+GDLLYLMNGES LKSSA PP Y
Sbjct: 24 NWNKFGSGSRNLGDLLYLMNGESALKSSALHPPPEY 59
Score = 43.9 bits (102), Expect(2) = 6e-14
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = -3
Query: 458 PPPYMLQQKSHRGRLI*YNRNLC*NAQP*TNG*STLHSPF*GLATYPFNAFGTRHS 291
PP YMLQQ+SH+GRL + P N +H GLATYPF+ FGT S
Sbjct: 56 PPEYMLQQESHKGRLETSGK------MPARNPADKVHYIVQGLATYPFSDFGTGRS 105
>XP_002888391.1 hypothetical protein ARALYDRAFT_894061 [Arabidopsis lyrata subsp.
lyrata] EFH64650.1 hypothetical protein
ARALYDRAFT_894061 [Arabidopsis lyrata subsp. lyrata]
Length = 70
Score = 65.9 bits (159), Expect = 3e-11
Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 4/48 (8%)
Frame = -2
Query: 552 LLLNWNKFGSGSKNIGDLLYLMNGE--SVLKSSA--PPLYASTEITQG 421
++L WNKFGSGS+N+GDLLYLMNGE S LKSSA P +Y ST ITQG
Sbjct: 23 IILKWNKFGSGSRNLGDLLYLMNGEGKSALKSSALRPAVYDSTRITQG 70
>YP_004891654.1 unnamed protein product (chloroplast) [Nicotiana undulata]
YP_004891683.1 unnamed protein product (chloroplast)
[Nicotiana undulata] CAA77387.1 hypothetical protein
(chloroplast) [Nicotiana tabacum] CAA77406.1
hypothetical protein (chloroplast) [Nicotiana tabacum]
BAE46701.1 hypothetical protein (chloroplast) [Nicotiana
sylvestris] BAE46731.1 hypothetical protein
(chloroplast) [Nicotiana sylvestris] BAE48050.1
hypothetical protein (chloroplast) [Nicotiana
tomentosiformis] BAE48080.1 hypothetical protein
(chloroplast) [Nicotiana tomentosiformis] AEO95592.1
hypothetical protein (chloroplast) [Nicotiana undulata]
AEO95640.1 hypothetical protein (chloroplast) [Nicotiana
undulata] AEO95702.1 hypothetical protein [synthetic
construct] AEO95748.1 hypothetical protein [synthetic
construct] prf||1211235CD ORF 92
Length = 92
Score = 56.2 bits (134), Expect(2) = 4e-11
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +3
Query: 423 PV*FLLKHIGGGQTISKRTLHSLDREDHQYFLIRCRTYSNS 545
PV + +G G+TI KRT HSLDREDHQ F IRCR YSNS
Sbjct: 34 PVEAYTRGVGAGRTILKRTPHSLDREDHQDFAIRCRIYSNS 74
Score = 38.9 bits (89), Expect(2) = 4e-11
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 331 NP*NGLCNVLYPLVYGWAF*QRFLLYHINLPL 426
+P GLCNVLY L YG AF QRFL+Y +P+
Sbjct: 4 SPIPGLCNVLYLLGYGRAFYQRFLIYPCVIPV 35
>CDY45543.1 BnaCnng13020D [Brassica napus] CDY19675.1 BnaC09g29310D [Brassica
napus] CDX95211.1 BnaC09g16590D [Brassica napus]
Length = 148
Score = 65.1 bits (157), Expect = 4e-10
Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 4/48 (8%)
Frame = -2
Query: 552 LLLNWNKFGSGSKNIGDLLYLMN--GESVLKSSA--PPLYASTEITQG 421
++L WNKFGSGS+N+GDLLYLMN GES LKSSA P +Y ST ITQG
Sbjct: 36 IILKWNKFGSGSRNLGDLLYLMNGEGESALKSSALRPAVYDSTGITQG 83
Score = 48.1 bits (113), Expect(2) = 5e-10
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3
Query: 197 KENSVLIGHEYLNRTNHSADLFASEQNN 114
K+N VL+G EYLNR NHS D+F SEQNN
Sbjct: 121 KQNPVLLGREYLNRANHSVDIFTSEQNN 148
Score = 43.1 bits (100), Expect(2) = 5e-10
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -1
Query: 271 GRVNSIIDAC*HSNLSSPFRAYPKRKRIL 185
GRVNSIIDA HS+L SPFR YPK+ +L
Sbjct: 98 GRVNSIIDAWRHSSLPSPFRTYPKQNPVL 126
>CDY72580.1 BnaCnng78410D, partial [Brassica napus]
Length = 74
Score = 48.1 bits (113), Expect(2) = 5e-10
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3
Query: 197 KENSVLIGHEYLNRTNHSADLFASEQNN 114
K+N VL+G EYLNR NHS D+F SEQNN
Sbjct: 47 KQNPVLLGREYLNRANHSVDIFTSEQNN 74
Score = 43.1 bits (100), Expect(2) = 5e-10
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -1
Query: 271 GRVNSIIDAC*HSNLSSPFRAYPKRKRIL 185
GRVNSIIDA HS+L SPFR YPK+ +L
Sbjct: 24 GRVNSIIDAWRHSSLPSPFRTYPKQNPVL 52
>AKF01116.1 hypothetical chloroplast RF15 (chloroplast) [Bactris major]
AKF01189.1 hypothetical chloroplast RF15 (chloroplast)
[Beccariophoenix madagascariensis] AKF01208.1
hypothetical chloroplast RF15 (chloroplast)
[Beccariophoenix madagascariensis]
Length = 107
Score = 61.2 bits (147), Expect = 5e-09
Identities = 47/113 (41%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Frame = +2
Query: 95 LIEPNSNCFVLKQRDPRSGLFYSDIHDQ*VQNSLSFRIGPERRGKVGMSTGV-YY*IHPT 271
+ EPNSNCFV KQR PR + I + + FRIGPERR K GM T V + P
Sbjct: 1 MTEPNSNCFVPKQRYPRRPVRPIQIFTT-KRYWILFRIGPERRRKAGMPTDVCLFSNSPD 59
Query: 272 PRVPMGGNVWYQRH*MGKSPIPKTDYV-------MYFIRWFM--VGHFNRGFY 403
P VP+ +G S T++V MYFI W M G+F RGFY
Sbjct: 60 PIVPI----------LGTSSAKVTEWVSRQSLKRMYFICWVMGTSGYFTRGFY 102
>AKF01040.1 hypothetical chloroplast RF15 (chloroplast) [Attalea speciosa]
AOX12842.1 hypothetical chloroplast RF15 (chloroplast)
[Cocos nucifera] AOX12863.1 hypothetical chloroplast
RF15 (chloroplast) [Cocos nucifera]
Length = 107
Score = 60.1 bits (144), Expect = 1e-08
Identities = 46/113 (40%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Frame = +2
Query: 95 LIEPNSNCFVLKQRDPRSGLFYSDIHDQ*VQNSLSFRIGPERRGKVGMSTGV-YY*IHPT 271
+ EPNSNCFV KQR PR + I + + FRIGPERR + GM T V + P
Sbjct: 1 MTEPNSNCFVPKQRYPRRPVRPIQIFTT-KRYWILFRIGPERRRRAGMPTDVCLFSNSPD 59
Query: 272 PRVPMGGNVWYQRH*MGKSPIPKTDYV-------MYFIRWFM--VGHFNRGFY 403
P VP+ +G S T++V MYFI W M G+F RGFY
Sbjct: 60 PIVPI----------LGTSSAKVTEWVSRQSLKRMYFICWVMGTSGYFTRGFY 102
>YP_001109573.1 hypothetical protein Poptr_cp096 [Populus trichocarpa] ABO36777.1
conserved hypothetical protein (chloroplast) [Populus
trichocarpa]
Length = 71
Score = 55.5 bits (132), Expect = 3e-07
Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = -2
Query: 555 DLLLNWNKFGSGSKNIGDLLYLMNG------ESVLKSSAPPLYASTEITQ 424
DLLLNWNKFG GS+N+GDLLYLMN E V + P +ST ITQ
Sbjct: 21 DLLLNWNKFGRGSRNLGDLLYLMNNEWGVCFEIVRPGTTPESMSSTGITQ 70