BLASTX nr result
ID: Glycyrrhiza31_contig00018247
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza31_contig00018247
(447 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium ... 285 2e-88
WP_063987526.1 Ti-type conjugative transfer relaxase TraA [Methy... 171 1e-46
CRY97952.1 hypothetical protein (plasmid) [uncultured prokaryote] 158 5e-42
WP_062099392.1 conjugal transfer protein TraA [Caulobacter sp. C... 145 1e-37
SFK37529.1 Ti-type conjugative transfer relaxase TraA [Sphingomo... 144 3e-37
WP_025550893.1 conjugal transfer protein TraA [Sphingobium barth... 140 8e-36
WP_039574453.1 conjugal transfer protein TraA [Sphingopyxis frib... 140 1e-35
OHB40674.1 Ti-type conjugative transfer relaxase TraA [Phenyloba... 138 5e-35
ODT85536.1 Ti-type conjugative transfer relaxase TraA [Phenyloba... 138 5e-35
WP_064311754.1 Ti-type conjugative transfer relaxase TraA [Sphin... 137 1e-34
WP_064311877.1 Ti-type conjugative transfer relaxase TraA [Sphin... 137 1e-34
WP_033965821.1 conjugal transfer protein TraA [Sphingomonas sp. ... 136 2e-34
WP_030093042.1 conjugal transfer protein TraA, partial [Sphingom... 135 3e-34
WP_077508861.1 Ti-type conjugative transfer relaxase TraA [Sphin... 135 3e-34
WP_044334782.1 conjugal transfer protein TraA [Sphingomonas heng... 135 3e-34
WP_046766294.1 conjugal transfer protein TraA [Sphingobium chung... 135 4e-34
WP_022691586.1 conjugal transfer protein TrbA [Sphingomonas-like... 135 6e-34
WP_066522244.1 conjugal transfer protein TraA [Sphingobium cloac... 135 6e-34
WP_064311805.1 Ti-type conjugative transfer relaxase TraA [Sphin... 134 2e-33
OJU22317.1 Ti-type conjugative transfer relaxase TraA [Sphingomo... 133 2e-33
>WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium extorquens]
ACS44173.1 Conjugal transfer protein TraA (plasmid)
[Methylobacterium extorquens AM1]
Length = 964
Score = 285 bits (730), Expect = 2e-88
Identities = 145/158 (91%), Positives = 146/158 (92%), Gaps = 10/158 (6%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLLX 181
NGSLGWVERVESGGMSVRLDGPEGR IGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL
Sbjct: 615 NGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLLA 674
Query: 182 ----------VGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG 331
VGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG
Sbjct: 675 SPLMDRHSAYVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG 734
Query: 332 IVPASTIVVERPAEPELRPQPPAPRLGRFAGLKLGRAP 445
IVPASTIVVERPAEPELRP+PPAPRLGRFAGLKLGRAP
Sbjct: 735 IVPASTIVVERPAEPELRPEPPAPRLGRFAGLKLGRAP 772
>WP_063987526.1 Ti-type conjugative transfer relaxase TraA [Methylobacterium populi]
BAU94019.1 conjugal transfer relaxase TraA (plasmid)
[Methylobacterium populi] OAH27958.1 conjugal transfer
protein TraA [Methylobacterium populi]
Length = 985
Score = 171 bits (433), Expect = 1e-46
Identities = 94/157 (59%), Positives = 108/157 (68%), Gaps = 12/157 (7%)
Frame = +2
Query: 2 NGSLGWVERVESGG-MSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL 178
NG+LG +ER+E G ++VRLDG E + F+LKDYAH++HGYAATVHKAQGVTVDR H+L
Sbjct: 615 NGTLGTLERIEGGSSLTVRLDGAESMRVSFDLKDYAHIDHGYAATVHKAQGVTVDRAHVL 674
Query: 179 X----------VGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERR 328
VGLTRHRE V LH+ + D D L R SRERA++TTLDY AGFAERR
Sbjct: 675 ATPHMDRHAAYVGLTRHREGVELHWAKADLNDRAGLDRALSRERAKDTTLDYGAGFAERR 734
Query: 329 GIVPASTIVVERP-AEPELRPQPPAPRLGRFAGLKLG 436
GI P S IVV RP AE E APR FAGLKLG
Sbjct: 735 GIAPPSEIVVPRPSAEWERALDQTAPRRSMFAGLKLG 771
>CRY97952.1 hypothetical protein (plasmid) [uncultured prokaryote]
Length = 1003
Score = 158 bits (399), Expect = 5e-42
Identities = 89/163 (54%), Positives = 110/163 (67%), Gaps = 15/163 (9%)
Frame = +2
Query: 2 NGSLGWVERVESGG-----MSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDR 166
NGSLG VER+ES G ++VRLDG + R + F+LKDYA ++HGYA+T+HK+QGVTVD
Sbjct: 645 NGSLGTVERIESHGGGGASLAVRLDGADRRQVRFDLKDYAQIDHGYASTIHKSQGVTVDH 704
Query: 167 IHLLX----------VGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGF 316
HLL VG++RHRE + +HYG DDF D L R SRERA++TTLDY F
Sbjct: 705 GHLLASDGLDRHAAYVGMSRHRETLAVHYGADDFKDRDQLDRTLSRERAKDTTLDYGDAF 764
Query: 317 AERRGIVPASTIVVERPAEPELRPQPPAPRLGRFAGLKLGRAP 445
AERRG+V S I+VER PE+ AP+ F GLKLGRAP
Sbjct: 765 AERRGLV-RSEILVERGPAPEV---GRAPKRSMFDGLKLGRAP 803
>WP_062099392.1 conjugal transfer protein TraA [Caulobacter sp. CCH5-E12]
Length = 984
Score = 145 bits (366), Expect = 1e-37
Identities = 75/158 (47%), Positives = 99/158 (62%), Gaps = 10/158 (6%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NG+LG +ER+E ++VR+DG + R + F+LKDYA ++HGYA+T+HK+QG+TVD HLL
Sbjct: 630 NGTLGTLERIEGSSLTVRVDGMDRREVRFDLKDYAQIDHGYASTIHKSQGITVDHGHLLA 689
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG 331
VG++RHRE + +HYG DDF D L R RERA++TTLDY FAERRG
Sbjct: 690 SDGLDRHAAYVGMSRHRETLAVHYGADDFKDRGQLTRTLGRERAKDTTLDYGVAFAERRG 749
Query: 332 IVPASTIVVERPAEPELRPQPPAPRLGRFAGLKLGRAP 445
+ A + PA R + F GLKLGR P
Sbjct: 750 LDRAEILAERGPAPDAAR----TVKRSMFDGLKLGRTP 783
>SFK37529.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. NFR04]
Length = 1007
Score = 144 bits (364), Expect = 3e-37
Identities = 82/160 (51%), Positives = 103/160 (64%), Gaps = 16/160 (10%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NGSLG +E+V+ M+VRLD +GR +GF+ KDY + HGYAAT+HKAQGVTVDR+H+L
Sbjct: 620 NGSLGTIEQVDHARMAVRLD--DGRQVGFDHKDYGDITHGYAATIHKAQGVTVDRVHVLA 677
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDY---AAGFAE 322
V L+RHR+AV LHYG+DDF D LAR SR+R ++ LDY A FA
Sbjct: 678 TPGLDRHAAYVALSRHRDAVQLHYGRDDFADQGKLARTLSRDRPKDNVLDYDTAAERFAA 737
Query: 323 RRGIVPA---STIVVERPAEPELRPQPPAPRLGRFAGLKL 433
RRG+ + T+ E AEPE PAPR G F GL+L
Sbjct: 738 RRGVERSRILDTLAKEPLAEPERSAPAPAPRRGMFDGLRL 777
>WP_025550893.1 conjugal transfer protein TraA [Sphingobium barthaii]
Length = 972
Score = 140 bits (353), Expect = 8e-36
Identities = 81/165 (49%), Positives = 100/165 (60%), Gaps = 17/165 (10%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NG+LG +E+V MSVRLD +GR + F+LKDYAHV+HGYAAT+HK+QGVTVDR H+L
Sbjct: 620 NGTLGEIEQVSPERMSVRLD--DGRSVAFDLKDYAHVDHGYAATIHKSQGVTVDRAHVLA 677
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDY-------AA 310
V L+RHRE V LHYG+DDF D + L R SRERA++ DY
Sbjct: 678 TPGMDRHSAYVALSRHREGVQLHYGRDDFADQRQLTRTLSRERAKDMASDYPVDRDAEVR 737
Query: 311 GFAERRGIVPASTIVVERPAEPELRPQPPAPRLGRFAGLKLGRAP 445
FA+RRG+ E P+ R Q P+ G F GLKL AP
Sbjct: 738 AFADRRGL-SGEIRSAEPPSPAAERGQGDKPKRGMFDGLKLSAAP 781
>WP_039574453.1 conjugal transfer protein TraA [Sphingopyxis fribergensis] AJA08920.1
conjugal transfer protein TraA [Sphingopyxis
fribergensis]
Length = 978
Score = 140 bits (352), Expect = 1e-35
Identities = 80/158 (50%), Positives = 97/158 (61%), Gaps = 15/158 (9%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NG+LG VE+V + GM+VR DG GRG F+LKDYAHV+HGY+AT HKAQG+TVDR H+L
Sbjct: 625 NGTLGVVEQVSTRGMTVRTDG--GRGAAFDLKDYAHVDHGYSATFHKAQGMTVDRTHVLA 682
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDY-----AAGF 316
VGL+RHR+ V+LHYG+DDF L R SRERA++ DY A F
Sbjct: 683 TPGMDRHSAYVGLSRHRDGVSLHYGRDDFKHQGKLVRTLSRERAKDMAADYAKTDPARAF 742
Query: 317 AERRGIVPASTIVVERPAEPELRPQPPAPRLGRFAGLK 430
AERRGI +V PE+ Q P FAG K
Sbjct: 743 AERRGISMRERVVEAAKKLPEIAKQVPEKARSIFAGFK 780
>OHB40674.1 Ti-type conjugative transfer relaxase TraA [Phenylobacterium sp.
RIFCSPHIGHO2_01_FULL_70_10]
Length = 827
Score = 138 bits (347), Expect = 5e-35
Identities = 70/121 (57%), Positives = 83/121 (68%), Gaps = 10/121 (8%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NGSLG VERVE +SVRLDGP R + F +YAHV+HGYAAT+HK+QGVTVDR HLL
Sbjct: 613 NGSLGVVERVEGSTISVRLDGPGARQVAFSTHEYAHVDHGYAATIHKSQGVTVDRTHLLA 672
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG 331
VG+TRHR TLHY ++DF LA SRER ++TTLDY+ GFA RRG
Sbjct: 673 TSGLDRHATYVGMTRHRSEATLHYAREDFRSRSELAATLSRERPKDTTLDYSDGFAARRG 732
Query: 332 I 334
+
Sbjct: 733 V 733
>ODT85536.1 Ti-type conjugative transfer relaxase TraA [Phenylobacterium sp.
SCN 70-31]
Length = 827
Score = 138 bits (347), Expect = 5e-35
Identities = 70/121 (57%), Positives = 83/121 (68%), Gaps = 10/121 (8%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NGSLG VERVE +SVRLDGP R + F +YAHV+HGYAAT+HK+QGVTVDR HLL
Sbjct: 613 NGSLGVVERVEGSTISVRLDGPGARQVAFSTHEYAHVDHGYAATIHKSQGVTVDRTHLLA 672
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG 331
VG+TRHR TLHY ++DF LA SRER ++TTLDY+ GFA RRG
Sbjct: 673 TSGLDRHATYVGMTRHRSEATLHYAREDFRSRSELAATLSRERPKDTTLDYSDGFAARRG 732
Query: 332 I 334
+
Sbjct: 733 V 733
>WP_064311754.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. TDK1]
OAN63745.1 Ti-type conjugative transfer relaxase TraA
[Sphingomonas sp. TDK1]
Length = 1007
Score = 137 bits (345), Expect = 1e-34
Identities = 80/160 (50%), Positives = 100/160 (62%), Gaps = 16/160 (10%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NGSLG +E+V+ ++VRLD +GR + F+ K+Y V HGYAATVHKAQGVTVDR+H+L
Sbjct: 620 NGSLGTIEQVDHARIAVRLD--DGRRVAFDHKNYGDVTHGYAATVHKAQGVTVDRVHVLA 677
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAG---FAE 322
V L+RHR V LHYG+DDF D LAR SR+R ++ LDY A FA
Sbjct: 678 TPGLDRHAAYVALSRHRAVVHLHYGRDDFADQGKLARALSRDRPKDNALDYDAAAERFAA 737
Query: 323 RRGIVPA---STIVVERPAEPELRPQPPAPRLGRFAGLKL 433
RRG+ + T+ E AEPE PAPR G F GL+L
Sbjct: 738 RRGVERSRILDTLARESLAEPERSVPAPAPRRGMFDGLRL 777
>WP_064311877.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. TDK1]
OAN63539.1 Ti-type conjugative transfer relaxase TraA
[Sphingomonas sp. TDK1]
Length = 1009
Score = 137 bits (345), Expect = 1e-34
Identities = 79/160 (49%), Positives = 101/160 (63%), Gaps = 16/160 (10%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NGSLG +E+++ M+VRLD +GR + F+ K+Y V HGYAAT+HKAQGVTVDR+H+L
Sbjct: 620 NGSLGTIEQIDHARMAVRLD--DGRQVAFDHKNYGDVTHGYAATIHKAQGVTVDRVHVLA 677
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAG---FAE 322
V L+RHR+AV LHYG+DDF D LAR SR+R ++ LDY A FA
Sbjct: 678 TPGLDRHAAYVALSRHRDAVHLHYGRDDFADQGKLARTLSRDRPKDNALDYDAAAERFAA 737
Query: 323 RRGIVPA---STIVVERPAEPELRPQPPAPRLGRFAGLKL 433
RRG+ + T+ E AEPE PA R G F GL+L
Sbjct: 738 RRGVERSRILDTLAKEPLAEPERSAPAPAQRRGMFDGLRL 777
>WP_033965821.1 conjugal transfer protein TraA [Sphingomonas sp. Ant H11]
Length = 959
Score = 136 bits (342), Expect = 2e-34
Identities = 81/158 (51%), Positives = 97/158 (61%), Gaps = 10/158 (6%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLLX 181
NGSLG +E V + M+V LD GR + F+LKDYA ++HGYAATVHK+QGVTVD +H+L
Sbjct: 620 NGSLGRIESVSATRMAVLLDN--GRAVAFDLKDYAALDHGYAATVHKSQGVTVDHVHVLA 677
Query: 182 ----------VGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG 331
V L+RHRE+V LHYG DDF D LA SRERA++ DYA FA RR
Sbjct: 678 TPGLDRHAAYVALSRHRESVELHYGHDDFADHGKLAATLSRERAKDMASDYAPAFAARR- 736
Query: 332 IVPASTIVVERPAEPELRPQPPAPRLGRFAGLKLGRAP 445
IV+ PA R Q PAP+ FAGLKL P
Sbjct: 737 -----QIVLPTPA----REQQPAPKRDMFAGLKLRLPP 765
>WP_030093042.1 conjugal transfer protein TraA, partial [Sphingomonas sp. DC-6]
Length = 896
Score = 135 bits (341), Expect = 3e-34
Identities = 84/185 (45%), Positives = 104/185 (56%), Gaps = 41/185 (22%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NG+LG +ERV M+VRLD +GR + F+LKDYAHV+HGYAAT+HK+QGVTVD+ H+L
Sbjct: 484 NGTLGQIERVSPDSMAVRLD--DGRSVAFDLKDYAHVDHGYAATIHKSQGVTVDQAHVLA 541
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDY-------AA 310
VGL+RHRE V LHYG+DDF D + L R SRERA++ DY A
Sbjct: 542 TPGMDRHAAYVGLSRHREGVQLHYGRDDFADDRRLVRTLSRERAKDMASDYDRDPDAQAR 601
Query: 311 GFAERRGI--------VPAST----IVVERPAEPELRPQP------------PAPRLGRF 418
FA+RRG+ P T ER + E+R P PR G F
Sbjct: 602 SFADRRGLSGEIRLPDAPDRTGGERSAAERGSSREMREDPRRIGRGDEKAAGEGPRRGMF 661
Query: 419 AGLKL 433
GLKL
Sbjct: 662 DGLKL 666
>WP_077508861.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. LM7]
AQR72905.1 Ti-type conjugative transfer relaxase TraA
[Sphingomonas sp. LM7]
Length = 968
Score = 135 bits (341), Expect = 3e-34
Identities = 79/164 (48%), Positives = 96/164 (58%), Gaps = 18/164 (10%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLLX 181
NGSLG V+ V S M+V LD +GR I F+LK YA ++HGYAAT+HKAQGVTVDR+H+L
Sbjct: 620 NGSLGIVQSVTSARMAVMLD--DGRAIAFDLKHYAQLDHGYAATIHKAQGVTVDRVHVLA 677
Query: 182 ----------VGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG 331
V L+RHR+ V LHYG+DDF D L R SRER+++ DY FAERR
Sbjct: 678 TPGLDRHAAYVALSRHRDQVELHYGRDDFADQSKLVRTLSRERSKDLASDYTQDFAERRQ 737
Query: 332 IVPASTIVVERPAEP--------ELRPQPPAPRLGRFAGLKLGR 439
I +V R P +LRP P P F GL L R
Sbjct: 738 IRLPQPLVERRRPTPTCDPFAGLDLRPVTPPPARSMFDGLALSR 781
>WP_044334782.1 conjugal transfer protein TraA [Sphingomonas hengshuiensis]
AJP73712.1 conjugal transfer protein TraA [Sphingomonas
hengshuiensis]
Length = 1007
Score = 135 bits (341), Expect = 3e-34
Identities = 79/160 (49%), Positives = 100/160 (62%), Gaps = 16/160 (10%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NGSLG +E+V+ M+VRLD +GR + F+ K+Y V HGYAATVHKAQGVTVDR+H+L
Sbjct: 620 NGSLGTIEQVDHARMAVRLD--DGRQVAFDHKNYGDVTHGYAATVHKAQGVTVDRVHVLA 677
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAG---FAE 322
V L+RHR+AV LHYG+DDF D LAR +R+R ++ LDY A FA
Sbjct: 678 TPGLDRHAAYVALSRHRDAVQLHYGRDDFADQGKLARTLARDRPKDNALDYDAAAERFAL 737
Query: 323 RRGIVPA---STIVVERPAEPELRPQPPAPRLGRFAGLKL 433
RRG+ + T+ E E E PP PR G F GL+L
Sbjct: 738 RRGVERSRILDTLAKEPLVELERSATPPTPRRGMFDGLRL 777
>WP_046766294.1 conjugal transfer protein TraA [Sphingobium chungbukense] KKW89320.1
conjugal transfer protein TraA [Sphingobium chungbukense]
Length = 973
Score = 135 bits (340), Expect = 4e-34
Identities = 80/166 (48%), Positives = 97/166 (58%), Gaps = 18/166 (10%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NG+LG VERV ++VRLD +GR + F+LKDYAHV+HGYAAT+HK+QGVTVDR H+L
Sbjct: 619 NGTLGKVERVSPDSIAVRLD--DGRNVAFDLKDYAHVDHGYAATIHKSQGVTVDRAHVLA 676
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDY--------A 307
VGL+RHR+ V LHYG+DDF D L R RERA++ DY A
Sbjct: 677 TPGMDRNAAYVGLSRHRDGVQLHYGRDDFADQTKLVRTLGRERAKDMASDYYVRDRDAEA 736
Query: 308 AGFAERRGIVPASTIVVERPAEPELRPQPPAPRLGRFAGLKLGRAP 445
FA+RRG+ E L APR G F GLKL P
Sbjct: 737 RAFADRRGLA----------GEIRLGETLRAPRRGMFDGLKLPTEP 772
>WP_022691586.1 conjugal transfer protein TrbA [Sphingomonas-like bacterium B12]
Length = 974
Score = 135 bits (339), Expect = 6e-34
Identities = 79/172 (45%), Positives = 101/172 (58%), Gaps = 24/172 (13%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLLX 181
NGSLG VE V + M+V +D +GR + F++KDYA V+HGYAAT+HK+QGVTVDR+H+L
Sbjct: 620 NGSLGVVESVSTTRMAVMMD--DGRSVAFDVKDYADVDHGYAATIHKSQGVTVDRVHVLA 677
Query: 182 ----------VGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAGFAERRG 331
V L+RHR++V LHYG+DDF D L R SRER ++ DYA+ FAERR
Sbjct: 678 TPGLDRHASYVALSRHRDSVDLHYGRDDFADQGKLVRTLSRERGKDMASDYASSFAERRQ 737
Query: 332 IVPASTIVVERPAEPE--------------LRPQPPAPRLGRFAGLKLGRAP 445
I+ T +ER A P+ P P FAGLKL P
Sbjct: 738 IIRRGT-DIERSATDGPPHKVRSMFDGLRLTSPEAPQPSRDPFAGLKLSMKP 788
>WP_066522244.1 conjugal transfer protein TraA [Sphingobium cloacae] BAV66690.1
conjugal transfer protein TraA (plasmid) [Sphingobium
cloacae]
Length = 975
Score = 135 bits (339), Expect = 6e-34
Identities = 79/163 (48%), Positives = 96/163 (58%), Gaps = 19/163 (11%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NG+LG VERV M+V+LD +GR + F+LKDYAHV+HGYAAT+HK+QGVTVDR H+L
Sbjct: 619 NGTLGQVERVSPERMAVKLD--DGRQVAFDLKDYAHVDHGYAATIHKSQGVTVDRAHVLA 676
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDY--------- 304
V L+RHR+ V LHYG DDF D+ L R SR RA++ T DY
Sbjct: 677 TPGMDRHSAYVALSRHRDEVQLHYGHDDFADVSRLVRTLSRARAKDMTSDYPMFRDRDGK 736
Query: 305 AAGFAERRGIVPASTIVVERPAEPELRPQPPAPRLGRFAGLKL 433
FAERRG+ + V ER PR G F GLKL
Sbjct: 737 VRAFAERRGLSGEAKAVAER-----------QPRRGMFDGLKL 768
>WP_064311805.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. TDK1]
OAN63651.1 Ti-type conjugative transfer relaxase TraA
[Sphingomonas sp. TDK1]
Length = 1007
Score = 134 bits (336), Expect = 2e-33
Identities = 78/160 (48%), Positives = 100/160 (62%), Gaps = 16/160 (10%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NGSLG +E++ M+VRLD +GR + F+ K+Y V HGYAAT+HKAQGVTVDR+H+L
Sbjct: 620 NGSLGTIEQINHARMAVRLD--DGRQVAFDHKNYCDVTHGYAATIHKAQGVTVDRVHVLA 677
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDYAAG---FAE 322
V L+RHR+AV L+YG+DDF D LAR SR+R ++ LDY A FA
Sbjct: 678 TPGLDRHAAYVALSRHRDAVQLYYGRDDFADQGKLARTLSRDRPKDNALDYDAAAERFAA 737
Query: 323 RRGIVPA---STIVVERPAEPELRPQPPAPRLGRFAGLKL 433
RRG+ + T+ E AEPE PA R G F GL+L
Sbjct: 738 RRGVERSRILDTLAREPLAEPERSAPAPARRRGMFDGLRL 777
>OJU22317.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. 66-10]
Length = 968
Score = 133 bits (335), Expect = 2e-33
Identities = 77/163 (47%), Positives = 97/163 (59%), Gaps = 19/163 (11%)
Frame = +2
Query: 2 NGSLGWVERVESGGMSVRLDGPEGRGIGFELKDYAHVEHGYAATVHKAQGVTVDRIHLL- 178
NG+LG +ERV M+V+LD +GR + F+LKDYAHV+HGYAAT+HK+QGVTVD+ H+L
Sbjct: 619 NGTLGKIERVSPDSMAVKLD--DGRQVAFDLKDYAHVDHGYAATIHKSQGVTVDQGHVLA 676
Query: 179 ---------XVGLTRHREAVTLHYGQDDFGDIQALARGASRERAQETTLDY--------- 304
V L+RHR+ V LHYG+DDF D+ L R SRERA++ DY
Sbjct: 677 TPGMDRHSAYVALSRHRDEVQLHYGRDDFADVSRLVRTLSRERAKDMASDYPMFRDRDGK 736
Query: 305 AAGFAERRGIVPASTIVVERPAEPELRPQPPAPRLGRFAGLKL 433
FAERRG+ + V ER PR G F GLKL
Sbjct: 737 VRAFAERRGLSGEAKAVAER-----------QPRRGMFDGLKL 768