BLASTX nr result
ID: Glycyrrhiza31_contig00012182
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza31_contig00012182
(430 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum] 69 6e-14
GAU10517.1 hypothetical protein TSUD_421950, partial [Trifolium ... 50 5e-08
GAU37823.1 hypothetical protein TSUD_63850 [Trifolium subterraneum] 48 2e-07
GAU26533.1 hypothetical protein TSUD_361660 [Trifolium subterran... 47 5e-07
GAU51393.1 hypothetical protein TSUD_138060 [Trifolium subterran... 47 7e-07
GAU30604.1 hypothetical protein TSUD_392950 [Trifolium subterran... 40 1e-06
XP_008341993.1 PREDICTED: uncharacterized protein LOC103404803 [... 43 2e-06
YP_006666138.1 RnaseH (mitochondrion) [Malus domestica] CBX33402... 40 3e-06
OMO53937.1 reverse transcriptase [Corchorus capsularis] 41 6e-06
>GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum]
Length = 533
Score = 68.6 bits (166), Expect(2) = 6e-14
Identities = 36/97 (37%), Positives = 54/97 (55%)
Frame = -2
Query: 330 LFSLLLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAY 151
L ++ EMDS V+ +MV T+ +L PLL E + L+ + + HVYR++N A
Sbjct: 433 LLPKVVFEMDSKVIVNMVTSGHTNNAYLSPLLGEVVSLLQHPNWETSIAHVYREANRCAD 492
Query: 150 LLASMGHGTSSQPTVFEWARSSLQCFLYEDMRGVALP 40
L + GH +S + + A SLQ LY+D RG +LP
Sbjct: 493 FLTNKGHSSSFEGDIVNLACHSLQAILYDDFRGASLP 529
Score = 35.8 bits (81), Expect(2) = 6e-14
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = -1
Query: 427 FTRGFCCNLGSSTSVAAELWGLVLGLRLARSMAVQSFV 314
F +GF +GSS ++ AE+W L +G+R+A+++ + V
Sbjct: 401 FVKGFYSKIGSSNAIWAEMWVLRIGIRIAQNLLLPKVV 438
>GAU10517.1 hypothetical protein TSUD_421950, partial [Trifolium subterraneum]
Length = 238
Score = 50.1 bits (118), Expect(2) = 5e-08
Identities = 27/96 (28%), Positives = 48/96 (50%)
Frame = -2
Query: 318 LLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYLLAS 139
+++E DS+ V +M+ T +L+PLL E I L++ + H++R++N A LA
Sbjct: 142 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPSWTIHVNHIHREANSCANALAF 201
Query: 138 MGHGTSSQPTVFEWARSSLQCFLYEDMRGVALPITV 31
GH + + + + L +D+RG I V
Sbjct: 202 KGHDVGFTHVLLDSIPAYISTLLDKDLRGACSSIVV 237
Score = 34.3 bits (77), Expect(2) = 5e-08
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -1
Query: 427 FTRGFCCNLGSSTSVAAELWGLVLGLRLARSMAV 326
F +GF NLG+ ++ AEL G++ G ++AR M +
Sbjct: 106 FVKGFLRNLGTGNALLAELCGILFGCQMARDMCL 139
>GAU37823.1 hypothetical protein TSUD_63850 [Trifolium subterraneum]
Length = 193
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 26/96 (27%), Positives = 47/96 (48%)
Frame = -2
Query: 318 LLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYLLAS 139
+++E DS+ V +M+ T +L+PLL E I L++ + H++R++N LA
Sbjct: 97 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPSWTIHVNHIHREANSCVDALAF 156
Query: 138 MGHGTSSQPTVFEWARSSLQCFLYEDMRGVALPITV 31
GH + + + + L +D+RG I V
Sbjct: 157 KGHDVGFTHVLLDSIPAYISTLLDKDLRGACSSIVV 192
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 427 FTRGFCCNLGSSTSVAAELWGLVLGLRLARSM 332
F +GF NLG+ ++ AEL G++ G ++AR M
Sbjct: 61 FVKGFLRNLGTGNALLAELCGILFGCQMARDM 92
>GAU26533.1 hypothetical protein TSUD_361660 [Trifolium subterraneum]
Length = 193
Score = 47.0 bits (110), Expect(2) = 5e-07
Identities = 26/96 (27%), Positives = 47/96 (48%)
Frame = -2
Query: 318 LLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYLLAS 139
+++E DS+ V +M+ T +L+PLL E I L++ + H++R++N LA
Sbjct: 97 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPGWTIHVNHIHREANSCFDALAF 156
Query: 138 MGHGTSSQPTVFEWARSSLQCFLYEDMRGVALPITV 31
GH + + + + L +D+RG I V
Sbjct: 157 KGHDVGFTHVMLDSIPAYISTLLDKDLRGACSSIAV 192
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 427 FTRGFCCNLGSSTSVAAELWGLVLGLRLARSM 332
F +GF NLG+ ++ AEL G++ G ++AR M
Sbjct: 61 FVKGFLRNLGTGNALLAELCGILFGCQMARDM 92
>GAU51393.1 hypothetical protein TSUD_138060 [Trifolium subterraneum]
Length = 167
Score = 46.6 bits (109), Expect(2) = 7e-07
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = -2
Query: 237 LQEAIQLVYATDRACQLRHVYRKSNHSAYLLASMGHGTSSQPTVFEWARSSLQCFLYEDM 58
+ + IQ + D +L H+YR++N A +LA+MG ++ ++E ++ L++D
Sbjct: 97 IMKKIQELLNLDWEIRLTHIYREANRCADILANMGSNLAANKMIYEEPPLEVRQVLFDDF 156
Query: 57 RGVALPITVL 28
RGV+LP VL
Sbjct: 157 RGVSLPRVVL 166
Score = 33.9 bits (76), Expect(2) = 7e-07
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -1
Query: 418 GFCCNLGSSTSVAAELWGLVLGLRLARSMAV 326
GF LG++T+ AE+WGL GL LAR++ +
Sbjct: 38 GFAKFLGNTTAYMAEIWGLYEGLCLARNLGI 68
>GAU30604.1 hypothetical protein TSUD_392950 [Trifolium subterraneum]
Length = 233
Score = 40.4 bits (93), Expect(2) = 1e-06
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -1
Query: 421 RGFCCNLGSSTSVAAELWGLVLGLRLARSM 332
RGF +LGS+T+ AELWGL+ G+ +ARSM
Sbjct: 103 RGFSKSLGSATAYVAELWGLLEGISIARSM 132
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 25/94 (26%), Positives = 54/94 (57%)
Frame = -2
Query: 327 FSLLLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYL 148
F+ L V+MDS ++ S++ H + ++++ I+ + + D + ++ H YR++N A +
Sbjct: 134 FNKLEVQMDSEIIVSIINKHGHGNVSGWSIIKK-IRSLLSLDWSVKICHFYREANRCADM 192
Query: 147 LASMGHGTSSQPTVFEWARSSLQCFLYEDMRGVA 46
LA+MG + ++ ++L+ L +D RGV+
Sbjct: 193 LANMGCVHNHGTLIYNQPLTNLRQLLDDDNRGVS 226
>XP_008341993.1 PREDICTED: uncharacterized protein LOC103404803 [Malus domestica]
Length = 1433
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = -2
Query: 318 LLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDR--ACQLRHVYRKSNHSAYLL 145
+++E DS V+ Q L PL + A +R C++ H+YR+ N SA +
Sbjct: 1337 VILECDS---WDAVISIQKPMLVSHPLYNLILDCKEAIERNWRCEVTHIYREKNASADHM 1393
Query: 144 ASMGHGTSSQPTVFEWARSSLQCFLYEDMRGVALPITVL 28
A +GHG S VF+ ++ FL D G ALP VL
Sbjct: 1394 ADLGHGLSLGLHVFDSPPTTATNFLASDSIGRALPRAVL 1432
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -1
Query: 418 GFCCNLGSSTSVAAELWGLVLGLRLA 341
GF NLG T + AELWG+++GL +A
Sbjct: 1304 GFAANLGRGTXMEAELWGVLMGLTIA 1329
>YP_006666138.1 RnaseH (mitochondrion) [Malus domestica] CBX33402.1 rnaseH
(mitochondrion) [Malus domestica]
Length = 153
Score = 40.0 bits (92), Expect(2) = 3e-06
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = -2
Query: 327 FSLLLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYL 148
F + VE+DS+ V ++V L L++ Q D C+L H+YR+ N SA
Sbjct: 54 FRSVEVEVDSATVVTLVNQQDNSLHPLHTLIR-GCQAYLKMDWHCKLSHIYREKNFSADY 112
Query: 147 LASMGHGTSSQPTVFEWARSSLQC--FLYEDMRGVALPITVL 28
LAS+ G + FE C FL+ED G A P V+
Sbjct: 113 LASI--GLTYDLGYFESQSPPPGCIPFLFEDSLGYARPREVI 152
Score = 38.1 bits (87), Expect(2) = 3e-06
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -1
Query: 418 GFCCNLGSSTSVAAELWGLVLGLRLA 341
GF NLG +AAELWGL GLRLA
Sbjct: 24 GFTANLGKGKIIAAELWGLFFGLRLA 49
>OMO53937.1 reverse transcriptase [Corchorus capsularis]
Length = 1562
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = -1
Query: 427 FTRGFCCNLGSSTSVAAELWGLVLGLRLARSMAVQSFV 314
+ +GF N+G++ S++AELWG+ GL +A+SM + S V
Sbjct: 1456 WVKGFMLNIGTTDSLSAELWGIRQGLLMAKSMNIASLV 1493
Score = 36.2 bits (82), Expect(2) = 6e-06
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = -2
Query: 318 LLVEMDSSVVCSMVL--LHQTH-CLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYL 148
L++EMD++VV + L +H C L E IQ + T ++RH+YR+ N A L
Sbjct: 1492 LVIEMDAAVVVQFLKDQLDSSHPCYTLVRDCYEIIQGGWIT----KIRHIYREGNRCADL 1547
Query: 147 LASMGHGTSSQPTVFEW 97
LA++ H P V W
Sbjct: 1548 LATLAH---DNPPVVSW 1561