BLASTX nr result
ID: Glycyrrhiza31_contig00008261
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza31_contig00008261
(367 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EMT02256.1 DNA-directed RNA polymerase II subunit RPB1 [Aegilops... 61 2e-08
OEL32462.1 DNA-directed RNA polymerase II subunit 1 [Dichantheli... 61 2e-08
EMS47149.1 DNA-directed RNA polymerase II subunit RPB1 [Triticum... 60 3e-08
ELU04758.1 hypothetical protein CAPTEDRAFT_91083 [Capitella teleta] 53 2e-06
XP_001624788.1 predicted protein [Nematostella vectensis] EDO326... 51 8e-06
>EMT02256.1 DNA-directed RNA polymerase II subunit RPB1 [Aegilops tauschii]
Length = 1784
Score = 60.8 bits (146), Expect = 2e-08
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Frame = +1
Query: 4 ITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAFV 183
IT+LQP+IT+LQP+ ++L P+ T +QP+F+ + P T + +F+ + PD+T + F +
Sbjct: 1598 ITELQPDITELQPYFTELLPNVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTEL 1657
Query: 184 QPNITLLQ-------PDISIV*SYFPKL 246
P++T LQ PD++ + YF KL
Sbjct: 1658 LPDVTELQPYFTELLPDVTELQPYFTKL 1685
Score = 58.2 bits (139), Expect = 2e-07
Identities = 28/87 (32%), Positives = 54/87 (62%)
Frame = +1
Query: 1 HITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAF 180
+ T+L P++T+LQP+ ++L P T +QP+F+ + P T + +F+ + PD+T + +
Sbjct: 1639 YFTELLPDVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTKLLPDVTGLLPDVTE 1698
Query: 181 VQPNITLLQPDISIV*SYFPKLQSTVC 261
+QP +T L P+++ + Y +QS C
Sbjct: 1699 LQPYLTELLPEVTELQPYVTLVQSFTC 1725
Score = 57.4 bits (137), Expect = 4e-07
Identities = 29/93 (31%), Positives = 57/93 (61%)
Frame = +1
Query: 1 HITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAF 180
+ T+L P++T+LQP+ ++L P T +QP+F+ + P T + +F+ + PD+T + F
Sbjct: 1625 YFTELLPDVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTK 1684
Query: 181 VQPNITLLQPDISIV*SYFPKLQSTVCKV*SFV 279
+ P++T L PD++ + Y +L V ++ +V
Sbjct: 1685 LLPDVTGLLPDVTELQPYLTELLPEVTELQPYV 1717
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/89 (33%), Positives = 54/89 (60%)
Frame = +1
Query: 1 HITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAF 180
++ LQP+IT+LQP I++L P+FT + P+ + +QP+FT + + + P T + +
Sbjct: 1590 YVAWLQPDITELQPDITELQPYFTELLPNVTELQPYFTELLPDVTELQPYFTELLPDVTE 1649
Query: 181 VQPNITLLQPDISIV*SYFPKLQSTVCKV 267
+QP T L PD++ + YF +L V ++
Sbjct: 1650 LQPYFTELLPDVTELQPYFTELLPDVTEL 1678
>OEL32462.1 DNA-directed RNA polymerase II subunit 1 [Dichanthelium oligosanthes]
Length = 1901
Score = 60.8 bits (146), Expect = 2e-08
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = +1
Query: 1 HITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAF 180
+ T +QP +T +QP +S + P+ IQP+ IQP+ CI + A+
Sbjct: 1649 YFTFIQPYVTFVQPDLSFIQPNIPIIQPYLPFIQPNIACIQPYL--------------AW 1694
Query: 181 VQPNITLLQPDISIV*SYFPKLQSTVCKV*SF 276
+QPNIT LQPDI+ + SYF +LQS + +V F
Sbjct: 1695 IQPNITKLQPDITKLQSYFSELQSFISQVQPF 1726
>EMS47149.1 DNA-directed RNA polymerase II subunit RPB1 [Triticum urartu]
Length = 1846
Score = 60.5 bits (145), Expect = 3e-08
Identities = 32/88 (36%), Positives = 55/88 (62%)
Frame = +1
Query: 4 ITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAFV 183
+T+LQP+IT+LQP++++L P T +QP+F+ + P T + +F+ + PD+T +
Sbjct: 1653 VTELQPDITELQPYVTELQPDITELQPYFTELLPDVTELQPYFTELLPDVT-------EL 1705
Query: 184 QPNITLLQPDISIV*SYFPKLQSTVCKV 267
QP T L PD++ + YF KL V ++
Sbjct: 1706 QPYFTELLPDVTELQPYFTKLLPDVTEL 1733
Score = 59.3 bits (142), Expect = 9e-08
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Frame = +1
Query: 1 HITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAF 180
++T+LQP+IT+LQP+ ++L P T +QP+F+ + P T + +F+ + PD+T + F
Sbjct: 1666 YVTELQPDITELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTK 1725
Query: 181 VQPNITLLQ-------PDISIV*SYFPKLQSTVCKV 267
+ P++T LQ PD++ + YF +L V ++
Sbjct: 1726 LLPDVTELQPYFTELLPDVTELQPYFTELLPDVTEL 1761
Score = 56.6 bits (135), Expect = 7e-07
Identities = 31/88 (35%), Positives = 53/88 (60%)
Frame = +1
Query: 4 ITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAFV 183
IT+LQP +T+LQP I++L P+FT + P + +QP+FT + + + P T + + +
Sbjct: 1660 ITELQPYVTELQPDITELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTELLPDVTEL 1719
Query: 184 QPNITLLQPDISIV*SYFPKLQSTVCKV 267
QP T L PD++ + YF +L V ++
Sbjct: 1720 QPYFTKLLPDVTELQPYFTELLPDVTEL 1747
Score = 56.6 bits (135), Expect = 7e-07
Identities = 31/92 (33%), Positives = 56/92 (60%)
Frame = +1
Query: 1 HITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAF 180
+ T+L P++T+LQP+ ++L P T +QP+F+ + P T + +F+ + PD+T + F
Sbjct: 1694 YFTELLPDVTELQPYFTELLPDVTELQPYFTKLLPDVTELQPYFTELLPDVTELQPYFTE 1753
Query: 181 VQPNITLLQPDISIV*SYFPKLQSTVCKV*SF 276
+ P++T LQP ++ + +LQ V V SF
Sbjct: 1754 LLPDVTELQPYLTELLPEVTELQPYVTFVQSF 1785
>ELU04758.1 hypothetical protein CAPTEDRAFT_91083 [Capitella teleta]
Length = 120
Score = 52.8 bits (125), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 1 HITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDIT 156
H++ L P+++ L PH S L PH + + PH SC+ PH +C+ SH S + P T
Sbjct: 59 HVSWLMPHVSCLMPHASCLIPHASCLMPHASCLMPHASCLMSHASCLMPHDT 110
>XP_001624788.1 predicted protein [Nematostella vectensis] EDO32688.1 predicted
protein [Nematostella vectensis]
Length = 115
Score = 51.2 bits (121), Expect = 8e-06
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +1
Query: 1 HITQLQPNITKLQPHISQL*PHFTSIQPHFSCIQPHFTCI*SHFSII*PDITFV*SNFAF 180
HI + P+I + PHI + PH + PH + PH + H ++ P I V +
Sbjct: 5 HIIMVHPHILMVHPHIIMVHPHILMVHPHILMVHPHILMVHPHILMVHPHILMVHPHILR 64
Query: 181 VQPNITLLQPDISIV 225
V P+I ++ P I +V
Sbjct: 65 VHPHILMVHPHILMV 79