BLASTX nr result

ID: Glycyrrhiza31_contig00007110 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza31_contig00007110
         (518 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004512514.1 PREDICTED: nucleolar protein 12 [Cicer arietinum]       65   4e-09
KYP38835.1 RNA-binding protein 34 [Cajanus cajan]                      61   1e-08
XP_014521417.1 PREDICTED: RNA-binding protein 34 [Vigna radiata ...    57   2e-07
XP_003612864.1 RNA recognition motif [Medicago truncatula] AES95...    59   6e-07

>XP_004512514.1 PREDICTED: nucleolar protein 12 [Cicer arietinum]
          Length = 525

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
 Frame = +1

Query: 235 FSDDNPYRRKPQQPPPVSDATNHTPSPSNGVVXXXXXXXXXXXTPKLDSDSATE--DEAS 408
           FSDDNP++RKP +   VSD T+ T +P N VV           +P LDSDS  E  ++  
Sbjct: 44  FSDDNPFKRKPAKSTSVSDVTDKTLNPENAVVDEKKRKRKKEKSPVLDSDSKIEVSEKKK 103

Query: 409 EKKLKHGSDEREGKVVNLGGD---AVGNSEEGKAKQKKK 516
           +KK K G  E+E K  +   +   ++G+ EEGK K+K+K
Sbjct: 104 KKKKKSGLGEKEEKEKDNDNENEVSLGD-EEGKTKKKRK 141


>KYP38835.1 RNA-binding protein 34 [Cajanus cajan]
          Length = 474

 Score = 60.8 bits (146), Expect(2) = 1e-08
 Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
 Frame = +1

Query: 235 FSDDNPYRRKPQQPPPVSDATNHTPSPSN--------GVVXXXXXXXXXXXTPKLDSDSA 390
           FSDDNP+RRKP    P+SD+TNHT SP+N                      TP LDSD  
Sbjct: 39  FSDDNPFRRKPA---PLSDSTNHTESPNNVAPVNPDADEEKKRKRHKEKAPTPPLDSDPV 95

Query: 391 TE-DEASEKKLKHGSDEREGKVVNLGGDAVGNSEEGKAKQKK 513
            E  + SEKK K  SDE   +  NL  +A+G  +  + + +K
Sbjct: 96  IEVSKKSEKKRKRLSDEGRERDPNLAAEAIGKRKRKRDEVEK 137



 Score = 25.4 bits (54), Expect(2) = 1e-08
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +2

Query: 185 DAVSAPSSIFDKLF 226
           D VS+PSSIF KLF
Sbjct: 13  DTVSSPSSIFTKLF 26


>XP_014521417.1 PREDICTED: RNA-binding protein 34 [Vigna radiata var. radiata]
          Length = 516

 Score = 56.6 bits (135), Expect(2) = 2e-07
 Identities = 42/110 (38%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
 Frame = +1

Query: 205 QHFRQALRXXFSDDNPYRRKPQQPPPVSDATNHTPSPSNG------VVXXXXXXXXXXXT 366
           +H        FSDDNP+RRK   P P+SD TN    P+NG                   +
Sbjct: 34  EHGTATAASLFSDDNPFRRK---PAPLSDTTNQAYIPNNGNAQNRDAGDEKKRKKNKEKS 90

Query: 367 PKLDSDSATED-EASEKKLKHGSDEREGKVVNLGGDAVGNSEEGKAKQKK 513
           P LD  S TE  E SEKK K GSDE     ++LG +A     +GK K+K+
Sbjct: 91  PALDPVSVTEVLEKSEKKRKSGSDEGREGGLDLGAEA-----DGKRKRKR 135



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 185 DAVSAPSSIFDKLFG 229
           D VS+ SSIF+KLFG
Sbjct: 16  DTVSSSSSIFNKLFG 30


>XP_003612864.1 RNA recognition motif [Medicago truncatula] AES95822.1 RNA
           recognition motif [Medicago truncatula]
          Length = 518

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
 Frame = +1

Query: 235 FSDDNPYRRKPQQPPPVSDATNHTPSPSNGVVXXXXXXXXXXXTPKLDSDSATE-DEASE 411
           FSDDNPY+RKP          N T SP NGVV           +P +DS+   E  E  E
Sbjct: 46  FSDDNPYKRKP----------NQTLSPENGVVDEKKRKKNKEKSPVIDSNPIIEVSEKKE 95

Query: 412 KKLK----HGSDEREGKVVNLGGDAVGNSEEGKAKQ 507
           KK K     G +E + K VNL G+ VG+ ++ K K+
Sbjct: 96  KKKKKKSGSGEEEEKEKEVNLDGEGVGDKKKKKRKR 131


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