BLASTX nr result
ID: Glycyrrhiza31_contig00006555
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza31_contig00006555
(1286 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 665 0.0
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 650 0.0
YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.... 640 0.0
YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC1003... 640 0.0
YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 623 0.0
YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 623 0.0
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 621 0.0
AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis la... 620 0.0
AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 617 0.0
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 616 0.0
AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 615 0.0
YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medic... 609 0.0
YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medi... 609 0.0
AJE71946.1 RNA polymerase beta'' subunit (plastid) [Baptisia bra... 607 0.0
YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] AC... 607 0.0
YP_009141491.1 RNA polymerase beta' subunit (chloroplast) [Lathy... 605 0.0
AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago... 604 0.0
AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 603 0.0
AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 603 0.0
YP_009141275.1 RNA polymerase beta' subunit (chloroplast) [Lathy... 603 0.0
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 665 bits (1715), Expect = 0.0
Identities = 336/344 (97%), Positives = 339/344 (98%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD
Sbjct: 1048 LNPFHL---NWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 1104
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS
Sbjct: 1105 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 1164
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1165 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1224
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1225 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1284
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1285 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1344
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFFISKNLCDTSEI 70
RQHNKITLEK+NNFFEVEIRNILFHHRKLFDFFISKNLCDTSEI
Sbjct: 1345 RQHNKITLEKQNNFFEVEIRNILFHHRKLFDFFISKNLCDTSEI 1388
Score = 115 bits (288), Expect = 7e-24
Identities = 59/72 (81%), Positives = 59/72 (81%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
IQNSLGPLGIALPISNFYSFYRLITHNQISIT KETFQVIKYYLMDENEK
Sbjct: 977 IQNSLGPLGIALPISNFYSFYRLITHNQISITKNLKNLQLDKLKETFQVIKYYLMDENEK 1036
Query: 1105 IYKPDLYNNXEL 1070
IYKPDLYNN L
Sbjct: 1037 IYKPDLYNNIVL 1048
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 650 bits (1677), Expect = 0.0
Identities = 330/344 (95%), Positives = 333/344 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFLNHN CEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD
Sbjct: 1048 LNPFHL---NWYFLNHNYCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 1104
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVEQILEVRS
Sbjct: 1105 SVIIRSANPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 1164
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1165 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1224
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1225 NRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRALLLGITKT 1284
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMH SRS
Sbjct: 1285 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHHSRS 1344
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFFISKNLCDTSEI 70
RQ NKITLEKK NFFEVEIRNILFHHRKLFDFF SKNLCDTSEI
Sbjct: 1345 RQDNKITLEKKKNFFEVEIRNILFHHRKLFDFFNSKNLCDTSEI 1388
Score = 115 bits (288), Expect = 7e-24
Identities = 59/72 (81%), Positives = 59/72 (81%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
IQNSLGPLGIALPISNFYSFYRLITHNQISIT KETFQVIKYYLMDENEK
Sbjct: 977 IQNSLGPLGIALPISNFYSFYRLITHNQISITKNLKNLQLDKLKETFQVIKYYLMDENEK 1036
Query: 1105 IYKPDLYNNXEL 1070
IYKPDLYNN L
Sbjct: 1037 IYKPDLYNNIVL 1048
>YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.1 RpoC2
(chloroplast) [Wisteria sinensis]
Length = 1367
Score = 640 bits (1650), Expect = 0.0
Identities = 323/341 (94%), Positives = 330/341 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFLNHN EKTFTIISLGQFICENICIAQTKNGPHLK KSGQV+TVQ+D
Sbjct: 1030 LNPFHL---NWYFLNHNYYEKTFTIISLGQFICENICIAQTKNGPHLKQKSGQVITVQID 1086
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVEQILEVRS
Sbjct: 1087 SVIIRSANPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 1146
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1147 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1206
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1207 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1266
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGF++IMH SRS
Sbjct: 1267 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFQKIMHHSRS 1326
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFFISKNLCDT 79
RQHNKITLEKK N FEVEIRNILFHHRKLFDFFISKNLCDT
Sbjct: 1327 RQHNKITLEKKKNLFEVEIRNILFHHRKLFDFFISKNLCDT 1367
Score = 101 bits (252), Expect = 3e-19
Identities = 53/69 (76%), Positives = 56/69 (81%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGPLGIAL I+NFYSFYRLITHNQISIT KETFQVIKYY MDENEK
Sbjct: 962 IKNSLGPLGIALQIANFYSFYRLITHNQISIT---KNLQLDKLKETFQVIKYYFMDENEK 1018
Query: 1105 IYKPDLYNN 1079
IYKPDLY+N
Sbjct: 1019 IYKPDLYSN 1027
>YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC10039.1 RpoC2
(chloroplast) [Wisteria floribunda]
Length = 1367
Score = 640 bits (1650), Expect = 0.0
Identities = 323/341 (94%), Positives = 330/341 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFLNHN EKTFTIISLGQFICENICIAQTKNGPHLK KSGQV+TVQ+D
Sbjct: 1030 LNPFHL---NWYFLNHNYYEKTFTIISLGQFICENICIAQTKNGPHLKQKSGQVITVQID 1086
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVEQILEVRS
Sbjct: 1087 SVIIRSANPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 1146
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1147 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1206
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1207 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1266
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGF++IMH SRS
Sbjct: 1267 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFQKIMHHSRS 1326
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFFISKNLCDT 79
RQHNKITLEKK N FEVEIRNILFHHRKLFDFFISKNLCDT
Sbjct: 1327 RQHNKITLEKKKNLFEVEIRNILFHHRKLFDFFISKNLCDT 1367
Score = 101 bits (252), Expect = 3e-19
Identities = 53/69 (76%), Positives = 56/69 (81%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGPLGIAL I+NFYSFYRLITHNQISIT KETFQVIKYY MDENEK
Sbjct: 962 IKNSLGPLGIALQIANFYSFYRLITHNQISIT---KNLQLDKLKETFQVIKYYFMDENEK 1018
Query: 1105 IYKPDLYNN 1079
IYKPDLY+N
Sbjct: 1019 IYKPDLYSN 1027
>YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42736.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78900.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1372
Score = 623 bits (1607), Expect = 0.0
Identities = 315/333 (94%), Positives = 321/333 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+HN CEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQ D
Sbjct: 1037 LNPFHL---NWYFLHHNFCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQKD 1093
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSA PYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1094 SVIIRSAKPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEQILEIRS 1153
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1154 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1213
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1214 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1273
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1274 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1333
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
Q NKITLEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1334 GQQNKITLEKKKNLFEVEIRNLLFHHRKLFDFF 1366
Score = 96.3 bits (238), Expect = 1e-17
Identities = 52/72 (72%), Positives = 56/72 (77%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGPLGIAL I+NFYSF RLITHNQISIT KETFQVIKYYLMDENE
Sbjct: 969 IKNSLGPLGIALQIANFYSFSRLITHNQISIT---KNLQLDKLKETFQVIKYYLMDENET 1025
Query: 1105 IYKPDLYNNXEL 1070
I+KPDLY+N L
Sbjct: 1026 IFKPDLYSNIVL 1037
>YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus]
AMQ99218.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus mongholicus]
Length = 1376
Score = 623 bits (1607), Expect = 0.0
Identities = 315/333 (94%), Positives = 321/333 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+HN CEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQ D
Sbjct: 1041 LNPFHL---NWYFLHHNFCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQKD 1097
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSA PYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1098 SVIIRSAKPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEQILEIRS 1157
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1158 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1217
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1218 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1277
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1278 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1337
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
Q NKITLEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1338 GQQNKITLEKKKNLFEVEIRNLLFHHRKLFDFF 1370
Score = 96.3 bits (238), Expect = 1e-17
Identities = 52/72 (72%), Positives = 56/72 (77%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGPLGIAL I+NFYSF RLITHNQISIT KETFQVIKYYLMDENE
Sbjct: 973 IKNSLGPLGIALQIANFYSFSRLITHNQISIT---KNLQLDKLKETFQVIKYYLMDENET 1029
Query: 1105 IYKPDLYNNXEL 1070
I+KPDLY+N L
Sbjct: 1030 IFKPDLYSNIVL 1041
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 621 bits (1601), Expect = 0.0
Identities = 312/329 (94%), Positives = 320/329 (97%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+HN CEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD
Sbjct: 1046 LNPFHL---NWYFLHHNYCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 1102
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL+EGDI VTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1103 SVIIRSANPYLATPGATIHGHYGEILYEGDIFVTFIYEKSRSGDITQGLPKVEQILEIRS 1162
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1163 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1222
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1223 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1282
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1283 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1342
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKL 115
RQHNKITLEKK N FEVEIRN+LFHH+K+
Sbjct: 1343 RQHNKITLEKKKNLFEVEIRNLLFHHKKI 1371
Score = 98.2 bits (243), Expect = 4e-18
Identities = 53/72 (73%), Positives = 56/72 (77%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGPLGIAL I+NFYSFYR ITHNQISIT KETFQVIKYYLMDENEK
Sbjct: 978 IKNSLGPLGIALQIANFYSFYRSITHNQISIT---KNLQLDKFKETFQVIKYYLMDENEK 1034
Query: 1105 IYKPDLYNNXEL 1070
I KPDLY+N L
Sbjct: 1035 ILKPDLYSNIVL 1046
>AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis lambertii]
Length = 1368
Score = 620 bits (1599), Expect = 0.0
Identities = 313/333 (93%), Positives = 320/333 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+HN CEKT TIISLGQF+CENICIAQTKNGPHLKLKSGQVLTVQ D
Sbjct: 1033 LNPFHL---NWYFLHHNFCEKTLTIISLGQFLCENICIAQTKNGPHLKLKSGQVLTVQKD 1089
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1090 SVIIRSANPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEQILEIRS 1149
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1150 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1209
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1210 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1269
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI HRSRS
Sbjct: 1270 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRITHRSRS 1329
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
Q NKITLEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1330 GQQNKITLEKKKNLFEVEIRNLLFHHRKLFDFF 1362
Score = 98.6 bits (244), Expect = 3e-18
Identities = 53/72 (73%), Positives = 57/72 (79%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGPLGIAL I+NFYSF RLITHNQISIT KETFQVIKYYLMDENEK
Sbjct: 965 IKNSLGPLGIALQIANFYSFSRLITHNQISIT---KNLQLDKLKETFQVIKYYLMDENEK 1021
Query: 1105 IYKPDLYNNXEL 1070
I+KPDLY+N L
Sbjct: 1022 IFKPDLYSNIVL 1033
>AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus crassicarpus]
Length = 1374
Score = 617 bits (1592), Expect = 0.0
Identities = 311/333 (93%), Positives = 319/333 (95%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+HN CEKT TIISLGQFICENICIAQTKNGPH KLKSGQVLTVQ D
Sbjct: 1039 LNPFHL---NWYFLHHNFCEKTLTIISLGQFICENICIAQTKNGPHFKLKSGQVLTVQKD 1095
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSA PYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVE+ILE+RS
Sbjct: 1096 SVIIRSAKPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEKILEIRS 1155
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1156 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1215
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEA+CYRALLLGITKT
Sbjct: 1216 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAVCYRALLLGITKT 1275
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1276 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1335
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
Q NKITLEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1336 GQQNKITLEKKKNLFEVEIRNLLFHHRKLFDFF 1368
Score = 92.4 bits (228), Expect = 3e-16
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGP+GIAL I+NFYSF RLITHNQIS T KETFQVIKYYLMDENE
Sbjct: 971 IKNSLGPVGIALQIANFYSFSRLITHNQISRT---KNLQLDKLKETFQVIKYYLMDENET 1027
Query: 1105 IYKPDLYNNXEL 1070
I+KPDLY+N L
Sbjct: 1028 IFKPDLYSNIVL 1039
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 616 bits (1588), Expect = 0.0
Identities = 312/333 (93%), Positives = 321/333 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+H CEKTFTIISLGQFICENICIAQ KNGPHLKLKSGQVLTVQMD
Sbjct: 1042 LNPFHL---NWYFLHHYYCEKTFTIISLGQFICENICIAQMKNGPHLKLKSGQVLTVQMD 1098
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL++GDILVTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1099 SVIIRSANPYLATPGATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVEQILEIRS 1158
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
+DSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1159 VDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1218
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1219 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1278
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRI+HR RS
Sbjct: 1279 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIIHRLRS 1338
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
RQHNKITLEKK FEVEIRN+LFHHRKLFDFF
Sbjct: 1339 RQHNKITLEKK-KLFEVEIRNLLFHHRKLFDFF 1370
Score = 87.8 bits (216), Expect = 9e-15
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = -2
Query: 1279 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1100
NSLGPLGIAL ++NFYS YRLITHNQI+I KE FQVIKYYLMDENEKI+
Sbjct: 976 NSLGPLGIALQVANFYSLYRLITHNQIAI---IKNLQLDKLKEIFQVIKYYLMDENEKIF 1032
Query: 1099 KPDLYNNXEL 1070
KPDL +N L
Sbjct: 1033 KPDLDSNIVL 1042
>AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus canadensis]
Length = 1372
Score = 615 bits (1586), Expect = 0.0
Identities = 310/333 (93%), Positives = 320/333 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL++N CEKT TIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQ D
Sbjct: 1037 LNPFHL---NWYFLHNNFCEKTLTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQKD 1093
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
S+IIRSA PYLATPGATIHGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1094 SLIIRSAKPYLATPGATIHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEQILEIRS 1153
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNEC+TRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1154 IDSISMNLEKRIDAWNECVTRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1213
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1214 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1273
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1274 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1333
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
Q NKI+LEKK N FEVEIRN+LFHHRKLFDFF
Sbjct: 1334 GQQNKISLEKKKNLFEVEIRNLLFHHRKLFDFF 1366
Score = 95.1 bits (235), Expect = 4e-17
Identities = 51/72 (70%), Positives = 56/72 (77%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGP+GIAL I+NFYSF RLITHNQISIT KETFQVIKYYLMDENE
Sbjct: 969 IKNSLGPVGIALQIANFYSFSRLITHNQISIT---KNLQLDKLKETFQVIKYYLMDENET 1025
Query: 1105 IYKPDLYNNXEL 1070
I+KPDLY+N L
Sbjct: 1026 IFKPDLYSNIVL 1037
>YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medicago hybrida]
YP_009141687.1 RNA polymerase beta' subunit (chloroplast)
[Medicago papillosa] AIL56137.1 RNA polymerase beta'
subunit (chloroplast) [Medicago hybrida] AIL56212.1 RNA
polymerase beta' subunit (chloroplast) [Medicago
papillosa] AMC32363.1 RNA polymerase beta'' subunit
(chloroplast) [Medicago sativa] ANS57907.1 RNA polymerase
beta' subunit (chloroplast) [Medicago sativa]
Length = 1370
Score = 609 bits (1571), Expect = 0.0
Identities = 309/333 (92%), Positives = 320/333 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV+TVQMD
Sbjct: 1039 LNPFHL---NWYFLHHYDCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQVITVQMD 1095
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL++GDILVTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1096 SVIIRSANPYLATPGATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVEQILEIRS 1155
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1156 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1215
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1216 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1275
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1276 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1335
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
Q+NKITL+KK FEVEIRN+LFHHRKLFD F
Sbjct: 1336 TQYNKITLKKK-KLFEVEIRNLLFHHRKLFDSF 1367
Score = 85.1 bits (209), Expect = 6e-14
Identities = 45/70 (64%), Positives = 49/70 (70%)
Frame = -2
Query: 1279 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1100
NSLGPLGIA + NFYS YRLITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 973 NSLGPLGIARQVGNFYSLYRLITHNQISI---MKNFQLDKITEIFQVIKYYLMDENDKIF 1029
Query: 1099 KPDLYNNXEL 1070
KPDL +N L
Sbjct: 1030 KPDLDSNIVL 1039
>YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medicago falcata]
AOG66214.1 RNA polymerase beta'' subunit (chloroplast)
[Medicago sativa] APC60490.1 RNA polymerase beta''
subunit (chloroplast) [Medicago falcata]
Length = 1374
Score = 609 bits (1571), Expect = 0.0
Identities = 309/333 (92%), Positives = 320/333 (96%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV+TVQMD
Sbjct: 1043 LNPFHL---NWYFLHHYDCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQVITVQMD 1099
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL++GDILVTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1100 SVIIRSANPYLATPGATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVEQILEIRS 1159
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1160 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1219
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1220 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1279
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1280 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1339
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
Q+NKITL+KK FEVEIRN+LFHHRKLFD F
Sbjct: 1340 TQYNKITLKKK-KLFEVEIRNLLFHHRKLFDSF 1371
Score = 81.3 bits (199), Expect = 1e-12
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 1279 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1100
NSLGPLGIA + NF S YRLITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 977 NSLGPLGIARQVGNFDSLYRLITHNQISI---MKNFQLDKITEIFQVIKYYLMDENDKIF 1033
Query: 1099 KPDLYNNXEL 1070
KPDL +N L
Sbjct: 1034 KPDLDSNIVL 1043
>AJE71946.1 RNA polymerase beta'' subunit (plastid) [Baptisia bracteata]
AJE72372.1 RNA polymerase beta'' subunit (plastid)
[Baptisia alba]
Length = 1383
Score = 607 bits (1565), Expect = 0.0
Identities = 308/344 (89%), Positives = 326/344 (94%), Gaps = 1/344 (0%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NW+F +HN CEKTFTIISLGQF+CEN+CIAQTKNGPHLK SGQVLTVQ+D
Sbjct: 1047 LNPFHL---NWHFFHHNYCEKTFTIISLGQFLCENVCIAQTKNGPHLK--SGQVLTVQID 1101
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SV+IRSANPYLATPGAT+HGHYGEIL+EGDILVTFIYEKSRSGDITQGLPKVEQ+LEVRS
Sbjct: 1102 SVVIRSANPYLATPGATVHGHYGEILYEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRS 1161
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEK++D WNE ITRILGIPWGFLIGAELTI QSRISLVNKIQKVYRSQGVHIH
Sbjct: 1162 IDSISMNLEKKVDTWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVHIH 1221
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRAERTGRALEEAICYRA+LLGITKT
Sbjct: 1222 NRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAILLGITKT 1281
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMH RS
Sbjct: 1282 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMH--RS 1339
Query: 201 RQHNKITLE-KKNNFFEVEIRNILFHHRKLFDFFISKNLCDTSE 73
RQHNKITLE KKNN FE E+R+ILFHHR++FDFFISKNLCDTSE
Sbjct: 1340 RQHNKITLETKKNNVFEGEMRDILFHHREVFDFFISKNLCDTSE 1383
Score = 88.2 bits (217), Expect = 6e-15
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = -2
Query: 1285 IQNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEK 1106
I+NSLGPLGIAL ++N YSF+ LITHNQISIT KETFQV K+YLMDENE+
Sbjct: 979 IKNSLGPLGIALQVANLYSFFCLITHNQISIT---TNLQLDKVKETFQVFKHYLMDENER 1035
Query: 1105 IYKPDLYNNXEL 1070
IYKPDL +N L
Sbjct: 1036 IYKPDLCSNIVL 1047
>YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] ACH41072.1 RNA
polymerase beta' subunit (chloroplast) [Cicer arietinum]
Length = 1376
Score = 607 bits (1564), Expect = 0.0
Identities = 308/333 (92%), Positives = 316/333 (94%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+HN EKT TIISLGQFICENICI Q KN PHLKLKSGQVLTVQMD
Sbjct: 1041 LNPFHL---NWYFLHHNYFEKTLTIISLGQFICENICITQKKNEPHLKLKSGQVLTVQMD 1097
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL EGDILVTFIYEKSRSGDITQGLPKVEQILE+RS
Sbjct: 1098 SVIIRSANPYLATPGATIHGHYGEILDEGDILVTFIYEKSRSGDITQGLPKVEQILEIRS 1157
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECI RILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1158 IDSISMNLEKRIDAWNECIPRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1217
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1218 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1277
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IPVGTGFKRIMHRSRS
Sbjct: 1278 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKRIMHRSRS 1337
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
RQHNKITL+KK FEVEIRN+L HHRKLFDF+
Sbjct: 1338 RQHNKITLKKKKKLFEVEIRNLLLHHRKLFDFY 1370
Score = 85.1 bits (209), Expect = 6e-14
Identities = 43/71 (60%), Positives = 51/71 (71%)
Frame = -2
Query: 1282 QNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKI 1103
+NSLGPLGIAL ++N+YSFYRLITHNQ+SIT E V+KYYLMDEN+KI
Sbjct: 974 KNSLGPLGIALQVANYYSFYRLITHNQVSIT---NNLQLDKLIEICHVMKYYLMDENDKI 1030
Query: 1102 YKPDLYNNXEL 1070
+KPDL N L
Sbjct: 1031 FKPDLSKNIVL 1041
>YP_009141491.1 RNA polymerase beta' subunit (chloroplast) [Lathyrus tingitanus]
AIL56017.1 RNA polymerase beta' subunit (chloroplast)
[Lathyrus tingitanus]
Length = 1375
Score = 605 bits (1560), Expect = 0.0
Identities = 305/332 (91%), Positives = 318/332 (95%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP++ NW+FL+H SCEKTFTIISLGQF+CENICIAQ KNGPHLKLKSGQV+TVQMD
Sbjct: 1042 LNPVHL---NWFFLHHFSCEKTFTIISLGQFLCENICIAQMKNGPHLKLKSGQVITVQMD 1098
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL +GDILVTFIYEKSRSGDITQGLPKVEQI E+RS
Sbjct: 1099 SVIIRSANPYLATPGATIHGHYGEILSQGDILVTFIYEKSRSGDITQGLPKVEQIFEIRS 1158
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECIT+I+GIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1159 IDSISMNLEKRIDAWNECITKIIGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1218
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLG+TKT
Sbjct: 1219 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGVTKT 1278
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1279 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1338
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDF 106
RQHNKIT KK FEVEIRN+LFHHRKL DF
Sbjct: 1339 RQHNKITRNKK--LFEVEIRNLLFHHRKLLDF 1368
Score = 82.0 bits (201), Expect = 6e-13
Identities = 42/71 (59%), Positives = 49/71 (69%)
Frame = -2
Query: 1282 QNSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKI 1103
+NSLGPLGI L ++NFYS Y LITHNQISI + FQV+KYY +DENEKI
Sbjct: 975 KNSLGPLGITLQVANFYSLYHLITHNQISI---IKNLQLDKLTKIFQVMKYYFIDENEKI 1031
Query: 1102 YKPDLYNNXEL 1070
KPDLY+N L
Sbjct: 1032 CKPDLYSNIVL 1042
>AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 1370
Score = 604 bits (1557), Expect = 0.0
Identities = 307/333 (92%), Positives = 318/333 (95%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV+TVQMD
Sbjct: 1039 LNPFHL---NWYFLHHYYCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQVITVQMD 1095
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATP ATIHGHYGEIL++GDILVTFIYEKSRSGDITQGLPKVE+ILE+RS
Sbjct: 1096 SVIIRSANPYLATPEATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVERILEIRS 1155
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1156 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1215
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1216 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1275
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1276 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1335
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
RQ+NKITL KK FEVEIRN+LFHHR LFD F
Sbjct: 1336 RQYNKITL-KKEKLFEVEIRNLLFHHRNLFDSF 1367
Score = 85.1 bits (209), Expect = 6e-14
Identities = 45/70 (64%), Positives = 49/70 (70%)
Frame = -2
Query: 1279 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1100
NSLGPLGIA + NFYS YRLITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 973 NSLGPLGIARQVGNFYSLYRLITHNQISI---MKNFQLDKITEIFQVIKYYLMDENDKIF 1029
Query: 1099 KPDLYNNXEL 1070
KPDL +N L
Sbjct: 1030 KPDLDSNIVL 1039
>AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
Length = 1370
Score = 603 bits (1556), Expect = 0.0
Identities = 307/333 (92%), Positives = 318/333 (95%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV+TVQMD
Sbjct: 1039 LNPFHL---NWYFLHHYYCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQVITVQMD 1095
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATP ATIHGHYGEIL++GDILVTFIYEKSRS DITQGLPKVEQILE+RS
Sbjct: 1096 SVIIRSANPYLATPEATIHGHYGEILYQGDILVTFIYEKSRSSDITQGLPKVEQILEIRS 1155
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1156 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1215
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1216 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1275
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1276 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1335
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
RQ+NKITL+KK FEVEIRN+LFHHR LFD F
Sbjct: 1336 RQYNKITLKKK-KLFEVEIRNLLFHHRNLFDSF 1367
Score = 83.2 bits (204), Expect = 3e-13
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 1279 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1100
NSLGPLGIA + NFYS Y LITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 973 NSLGPLGIARQVGNFYSLYHLITHNQISI---MKNFQLDKITEIFQVIKYYLMDENDKIF 1029
Query: 1099 KPDLYNNXEL 1070
KPDL +N L
Sbjct: 1030 KPDLDSNIVL 1039
>AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
AFR60049.1 RNA polymerase beta'' subunit (plastid)
[Medicago truncatula]
Length = 1370
Score = 603 bits (1556), Expect = 0.0
Identities = 307/333 (92%), Positives = 318/333 (95%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NWYFL+H CEKTFTIISLGQFICENICIA+ KNGPHLKLKSGQV+TVQMD
Sbjct: 1039 LNPFHL---NWYFLHHYYCEKTFTIISLGQFICENICIAKMKNGPHLKLKSGQVITVQMD 1095
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATP ATIHGHYGEIL++GDILVTFIYEKSRS DITQGLPKVEQILE+RS
Sbjct: 1096 SVIIRSANPYLATPEATIHGHYGEILYQGDILVTFIYEKSRSSDITQGLPKVEQILEIRS 1155
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1156 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1215
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT
Sbjct: 1216 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 1275
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1276 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1335
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDFF 103
RQ+NKITL+KK FEVEIRN+LFHHR LFD F
Sbjct: 1336 RQYNKITLKKK-KLFEVEIRNLLFHHRNLFDSF 1367
Score = 83.2 bits (204), Expect = 3e-13
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 1279 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1100
NSLGPLGIA + NFYS Y LITHNQISI E FQVIKYYLMDEN+KI+
Sbjct: 973 NSLGPLGIARQVGNFYSLYHLITHNQISI---MKNFQLDKITEIFQVIKYYLMDENDKIF 1029
Query: 1099 KPDLYNNXEL 1070
KPDL +N L
Sbjct: 1030 KPDLDSNIVL 1039
>YP_009141275.1 RNA polymerase beta' subunit (chloroplast) [Lathyrus clymenum]
AIL55800.1 RNA polymerase beta' subunit (chloroplast)
[Lathyrus clymenum]
Length = 1374
Score = 603 bits (1556), Expect = 0.0
Identities = 306/332 (92%), Positives = 317/332 (95%)
Frame = -3
Query: 1101 INPIYTITXNWYFLNHNSCEKTFTIISLGQFICENICIAQTKNGPHLKLKSGQVLTVQMD 922
+NP + NW+FL+H SCEKTFTIISLGQ ICENICIAQ KNGPHLKLKSGQV+TVQMD
Sbjct: 1041 LNPFHL---NWFFLHHFSCEKTFTIISLGQLICENICIAQMKNGPHLKLKSGQVITVQMD 1097
Query: 921 SVIIRSANPYLATPGATIHGHYGEILFEGDILVTFIYEKSRSGDITQGLPKVEQILEVRS 742
SVIIRSANPYLATPGATIHGHYGEIL +GDILVTFIYEKSRSGDITQGLPKVEQI E+RS
Sbjct: 1098 SVIIRSANPYLATPGATIHGHYGEILSQGDILVTFIYEKSRSGDITQGLPKVEQIFEIRS 1157
Query: 741 IDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 562
IDSISMNLEKRIDAWNECIT+ILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH
Sbjct: 1158 IDSISMNLEKRIDAWNECITKILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIH 1217
Query: 561 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKT 382
NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLG+TKT
Sbjct: 1218 NRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGVTKT 1277
Query: 381 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 202
SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS
Sbjct: 1278 SLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRS 1337
Query: 201 RQHNKITLEKKNNFFEVEIRNILFHHRKLFDF 106
RQHNKIT +KK FEVEIRN+ FHHRKLFDF
Sbjct: 1338 RQHNKITRKKK--LFEVEIRNLWFHHRKLFDF 1367
Score = 87.4 bits (215), Expect = 1e-14
Identities = 46/70 (65%), Positives = 49/70 (70%)
Frame = -2
Query: 1279 NSLGPLGIALPISNFYSFYRLITHNQISITXXXXXXXXXXXKETFQVIKYYLMDENEKIY 1100
NS GPLGIAL ++NFYS Y LITHNQISI E FQVIKYYLMDENEKI
Sbjct: 975 NSFGPLGIALQVANFYSLYHLITHNQISI---IKNLQLDKFTEIFQVIKYYLMDENEKIC 1031
Query: 1099 KPDLYNNXEL 1070
KPDLY+N L
Sbjct: 1032 KPDLYSNIVL 1041