BLASTX nr result

ID: Glycyrrhiza31_contig00005320 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza31_contig00005320
         (485 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009049788.1 hypothetical protein (mitochondrion) [Capsicum an...   110   3e-28
YP_009045731.1 orf148b (mitochondrion) [Batis maritima] AIC83334...    70   2e-12
KXG21685.1 hypothetical protein SORBI_009G095600 [Sorghum bicolor]     69   5e-12
NP_064047.1 orf169 gene product (mitochondrion) [Beta vulgaris s...    69   1e-11
CBJ23345.1 hypothetical protein (mitochondrion) [Beta vulgaris s...    67   8e-11
EOY06883.1 Uncharacterized protein TCM_021470 [Theobroma cacao]        58   3e-08
AHC94298.1 NADH dehydrogenase subunit 6, partial (mitochondrion)...    56   8e-07
ABC18241.1 NADH dehydrogenase subunit 6, partial (mitochondrion)...    56   1e-06
P60497.1 RecName: Full=NADH-ubiquinone oxidoreductase chain 6; A...    56   1e-06
YP_717162.1 NADH dehydrogenase subunit 6 [Brassica napus] BAC989...    56   1e-06
YP_005090490.1 NADH dehydrogenase subunit 6 (mitochondrion) [Lot...    56   1e-06
YP_005090449.1 NADH dehydrogenase subunit 6 (mitochondrion) [Mil...    56   1e-06
AAF86489.1 NADH dehydrogenase subunit 6 (mitochondrion) [Lupinus...    56   1e-06
AHA47115.1 NADH dehydrogenase subunit 6 (mitochondrion) [Amborel...    56   1e-06
YP_588429.1 NADH dehydrogenase subunit 6 (mitochondrion) [Zea ma...    56   1e-06
ADG85346.1 NADH dehydrogenase subunit 6, partial (mitochondrion)...    54   3e-06
ADG85345.1 NADH dehydrogenase subunit 6, partial (mitochondrion)...    54   3e-06
YP_002000558.1 NADH dehydrogenase subunit 6 (mitochondrion) [Ory...    55   4e-06
ANY30440.1 NADH dehydrogenase subunit 6, partial (mitochondrion)...    54   4e-06
ADG85342.1 NADH dehydrogenase subunit 6, partial (mitochondrion)...    54   5e-06

>YP_009049788.1 hypothetical protein (mitochondrion) [Capsicum annuum] AIG89832.1
           hypothetical protein (mitochondrion) [Capsicum annuum]
           AIG90146.1 hypothetical protein (mitochondrion)
           [Capsicum annuum]
          Length = 117

 Score =  110 bits (274), Expect = 3e-28
 Identities = 49/55 (89%), Positives = 51/55 (92%)
 Frame = +3

Query: 321 YHDTFCFVEPCFGLWFDGCTC*KSGTFRFVFHPSLLRHFRFTSFVRSRLLRYDLP 485
           Y+DTF FVEPCFGLWFDGCTC KSGTFRFV HPSL +HFRFTSFVRSRLLRYDLP
Sbjct: 11  YYDTFRFVEPCFGLWFDGCTCKKSGTFRFVSHPSLSQHFRFTSFVRSRLLRYDLP 65


>YP_009045731.1 orf148b (mitochondrion) [Batis maritima] AIC83334.1 orf148b
           (mitochondrion) [Batis maritima]
          Length = 148

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 46/76 (60%), Positives = 53/76 (69%), Gaps = 7/76 (9%)
 Frame = -1

Query: 416 MKNKTECTGFLARTTIKPETKARLDKTESIMVPLVFPEMELSCWSKN*HESRS------- 258
           M NKTECTGFLAR TIKPETKA LDKTESIMV    P ++   W+ +  E+R+       
Sbjct: 1   MGNKTECTGFLARATIKPETKAGLDKTESIMVRR--PSLK---WNFH-AEARTSMKVDLF 54

Query: 257 ITTSAVVRISFYSSKP 210
           ITTSAVVR+SF  SKP
Sbjct: 55  ITTSAVVRLSFSFSKP 70



 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 33/51 (64%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
 Frame = -2

Query: 310 SLKWNFHAGARTSMKVDLLRPARLFV---FHFILPSPS*KTLTELLTEYQI 167
           SLKWNFHA ARTSMKVDL       V   F F  PSPS K L ELLTE QI
Sbjct: 36  SLKWNFHAEARTSMKVDLFITTSAVVRLSFSFSKPSPSTKALAELLTESQI 86


>KXG21685.1 hypothetical protein SORBI_009G095600 [Sorghum bicolor]
          Length = 132

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 38/81 (46%), Positives = 48/81 (59%)
 Frame = -3

Query: 399 MYRIFSTYNHQTRDQSKARQNRKYHGTLSLP*NGTFMLEQELA*KSIYYDQRGCSYFILF 220
           MYRIFSTYNHQTRDQS+ARQNRKYHGT S        +E E   K  +  +   +  ++ 
Sbjct: 1   MYRIFSTYNHQTRDQSRARQNRKYHGTSSF-----LEMELECWSKKTHSSRSITTSTVVR 55

Query: 219 FQALLRKHSLSYLRNIKSDTV 157
                + H+L YLRN+K   V
Sbjct: 56  ISFSSKAHALGYLRNLKERVV 76


>NP_064047.1 orf169 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           YP_004222289.1 hypothetical protein BevumaM_p051
           (mitochondrion) [Beta vulgaris subsp. maritima]
           YP_004842203.1 hypothetical protein BemaM_p159
           (mitochondrion) [Beta macrocarpa] BAA99357.1 orf169
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14109.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17516.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBX25008.1 hypothetical protein (mitochondrion) [Beta
           macrocarpa] CBL52034.1 hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 169

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
 Frame = -3

Query: 399 MYRIFSTYNHQTRDQSKARQNRKYHGTLSLP*NGTFMLEQELA-----*KSIYYDQRGCS 235
           MYRIFSTYNHQTRDQS+ARQNRKYHGT S         E EL+       S+  D    +
Sbjct: 1   MYRIFSTYNHQTRDQSRARQNRKYHGTSS-------FTEMELSCWFGVRTSMKVDLLRTT 53

Query: 234 YFILFF------QALLRKHSLSYLRNIKSD 163
             ++        QALL +HSLSYLR++ +D
Sbjct: 54  SAVVHISFPSSKQALLGEHSLSYLRSLDAD 83


>CBJ23345.1 hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 169

 Score = 66.6 bits (161), Expect = 8e-11
 Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
 Frame = -3

Query: 399 MYRIFSTYNHQTRDQSKARQNRKYHGTLSLP*NGTFMLEQELA-----*KSIYYDQRGCS 235
           MYRI STYNHQTRDQS+ARQNRKYHGT S         E EL+       S+  D    +
Sbjct: 1   MYRILSTYNHQTRDQSRARQNRKYHGTSS-------FTEMELSCWFGVRTSMKVDLLRTT 53

Query: 234 YFILFF------QALLRKHSLSYLRNIKSD 163
             ++        QALL +HSLSYLR++ +D
Sbjct: 54  SAVVHISFPSSKQALLGEHSLSYLRSLDAD 83


>EOY06883.1 Uncharacterized protein TCM_021470 [Theobroma cacao]
          Length = 94

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = -1

Query: 479 IIAKKSRPNKRSKPEVSQKTRMKNKTECTGFLARTTIKPETKARLDKTESIM 324
           ++  KS+ ++  + E      + NKTECTGFLA  TIKPETKA LDKTESIM
Sbjct: 5   LLVSKSKVHREFQIESRMDLVLGNKTECTGFLACATIKPETKAELDKTESIM 56


>AHC94298.1 NADH dehydrogenase subunit 6, partial (mitochondrion) [Amborella
           trichopoda]
          Length = 178

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 11  RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIF 45


>ABC18241.1 NADH dehydrogenase subunit 6, partial (mitochondrion) [Brassica
           oleracea var. botrytis]
          Length = 201

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIF 53


>P60497.1 RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
           Full=NADH dehydrogenase subunit 6
          Length = 205

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIF 53


>YP_717162.1 NADH dehydrogenase subunit 6 [Brassica napus] BAC98911.1 NADH
           dehydrogenase subunit 6 (mitochondrion) [Brassica napus]
          Length = 205

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIF 53


>YP_005090490.1 NADH dehydrogenase subunit 6 (mitochondrion) [Lotus japonicus]
           AET62950.1 NADH dehydrogenase subunit 6 (mitochondrion)
           [Lotus japonicus]
          Length = 205

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIF 53


>YP_005090449.1 NADH dehydrogenase subunit 6 (mitochondrion) [Millettia pinnata]
           AET62909.1 NADH dehydrogenase subunit 6 (mitochondrion)
           [Millettia pinnata]
          Length = 205

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIF 53


>AAF86489.1 NADH dehydrogenase subunit 6 (mitochondrion) [Lupinus luteus]
          Length = 205

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIF 53


>AHA47115.1 NADH dehydrogenase subunit 6 (mitochondrion) [Amborella trichopoda]
          Length = 209

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIF 53


>YP_588429.1 NADH dehydrogenase subunit 6 (mitochondrion) [Zea mays subsp. mays]
           AAR91066.1 NADH dehydrogenase subunit 6 (mitochondrion)
           [Zea mays]
          Length = 220

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFCDTS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCDTSGLLILLGLDFFAMIF 53


>ADG85346.1 NADH dehydrogenase subunit 6, partial (mitochondrion) [Silene
           vulgaris]
          Length = 157

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFC+TS        DFFAMIF
Sbjct: 11  RAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIF 45


>ADG85345.1 NADH dehydrogenase subunit 6, partial (mitochondrion) [Silene
           paradoxa]
          Length = 157

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFC+TS        DFFAMIF
Sbjct: 11  RAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIF 45


>YP_002000558.1 NADH dehydrogenase subunit 6 (mitochondrion) [Oryza sativa Japonica
           Group] BAC19862.2 NADH dehydrogenase subunit 6
           (mitochondrion) [Oryza sativa Japonica Group]
          Length = 205

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFIL+FCDT+        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILIFCDTAGLLILLGLDFFAMIF 53


>ANY30440.1 NADH dehydrogenase subunit 6, partial (mitochondrion) [Vallisneria
           americana]
          Length = 184

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFC+TS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCNTSGLLILLGLDFFAMIF 53


>ADG85342.1 NADH dehydrogenase subunit 6, partial (mitochondrion) [Silene
           latifolia]
          Length = 190

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = +1

Query: 379 RAKNPVHSVLFFILVFCDTSXXXXXXXXDFFAMIF 483
           RAKNPVHSVLFFILVFC+TS        DFFAMIF
Sbjct: 19  RAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIF 53


Top