BLASTX nr result
ID: Glycyrrhiza31_contig00003779
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza31_contig00003779
(442 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002271476.1 PREDICTED: sm-like protein LSM1B [Vitis vinifera]... 77 2e-15
XP_008380788.1 PREDICTED: sm-like protein LSM1B [Malus domestica... 76 4e-15
OMO66134.1 hypothetical protein COLO4_30725 [Corchorus olitorius] 76 6e-15
XP_017258175.1 PREDICTED: sm-like protein LSM1B [Daucus carota s... 76 6e-15
OAY53239.1 hypothetical protein MANES_04G147400 [Manihot esculenta] 76 6e-15
XP_004303709.1 PREDICTED: sm-like protein LSM1B [Fragaria vesca ... 76 6e-15
XP_011036474.1 PREDICTED: probable U6 snRNA-associated Sm-like p... 75 9e-15
XP_010033722.1 PREDICTED: sm-like protein LSM1B [Eucalyptus gran... 75 9e-15
XP_002304120.1 small nuclear ribonucleoprotein [Populus trichoca... 75 9e-15
XP_006598838.1 PREDICTED: sm-like protein LSM1B [Glycine max] KR... 74 1e-14
XP_014516656.1 PREDICTED: sm-like protein LSM1B isoform X2 [Vign... 74 2e-14
KYP50472.1 U6 snRNA-associated Sm-like protein LSm1 [Cajanus cajan] 74 2e-14
XP_015902522.1 PREDICTED: sm-like protein LSM1B [Ziziphus jujuba] 74 2e-14
XP_014516657.1 PREDICTED: sm-like protein LSM1B [Vigna radiata v... 74 2e-14
XP_011012019.1 PREDICTED: probable U6 snRNA-associated Sm-like p... 74 2e-14
XP_007135420.1 hypothetical protein PHAVU_010G127900g [Phaseolus... 74 2e-14
NP_001237465.1 uncharacterized protein LOC100306352 [Glycine max... 74 2e-14
XP_006369123.1 small nuclear ribonucleoprotein [Populus trichoca... 74 2e-14
XP_018839212.1 PREDICTED: sm-like protein LSM1B [Juglans regia] 74 4e-14
XP_018835043.1 PREDICTED: sm-like protein LSM1B [Juglans regia] 74 4e-14
>XP_002271476.1 PREDICTED: sm-like protein LSM1B [Vitis vinifera] CAN62239.1
hypothetical protein VITISV_033727 [Vitis vinifera]
CBI35847.3 unnamed protein product, partial [Vitis
vinifera]
Length = 128
Score = 77.0 bits (188), Expect = 2e-15
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREASDLKGTMRKRMEFLDLD
Sbjct: 90 PPHMTRVSAAEIKRAQKAEREASDLKGTMRKRMEFLDLD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>XP_008380788.1 PREDICTED: sm-like protein LSM1B [Malus domestica] XP_008341819.1
PREDICTED: sm-like protein LSM1B [Malus domestica]
XP_009350857.1 PREDICTED: sm-like protein LSM1B [Pyrus x
bretschneideri]
Length = 128
Score = 76.3 bits (186), Expect = 4e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREASDLKGTMRKRMEFLD+D
Sbjct: 90 PPHMTRVSAAEIKRAQKAEREASDLKGTMRKRMEFLDMD 128
Score = 53.1 bits (126), Expect = 3e-06
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPED+YLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLV 25
>OMO66134.1 hypothetical protein COLO4_30725 [Corchorus olitorius]
Length = 128
Score = 75.9 bits (185), Expect = 6e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREA+DLKGTMRKRMEFLDLD
Sbjct: 90 PPHMTRVSAAEIKRAQKAEREATDLKGTMRKRMEFLDLD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>XP_017258175.1 PREDICTED: sm-like protein LSM1B [Daucus carota subsp. sativus]
Length = 128
Score = 75.9 bits (185), Expect = 6e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREASDLKGTMRKRMEFLD+D
Sbjct: 90 PPHMTRVSPAEIKRAQKAEREASDLKGTMRKRMEFLDMD 128
Score = 52.0 bits (123), Expect = 1e-05
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPED YLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDFYLSTSLASYLDKKLLV 25
>OAY53239.1 hypothetical protein MANES_04G147400 [Manihot esculenta]
Length = 128
Score = 75.9 bits (185), Expect = 6e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREA+DLKGTMRKRMEFLDLD
Sbjct: 90 PPHMTRVSAAEIKRAQKAEREATDLKGTMRKRMEFLDLD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>XP_004303709.1 PREDICTED: sm-like protein LSM1B [Fragaria vesca subsp. vesca]
Length = 128
Score = 75.9 bits (185), Expect = 6e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREASDLKGTMRKRMEFLD+D
Sbjct: 90 PPHMTRVSPAEIKRAQKAEREASDLKGTMRKRMEFLDMD 128
Score = 52.4 bits (124), Expect = 7e-06
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPED+YLSTSLASYLDKK+LV
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKILV 25
>XP_011036474.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Populus euphratica]
Length = 128
Score = 75.5 bits (184), Expect = 9e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREA+DLKGTMRKRMEFLDLD
Sbjct: 90 PPHMTRVSEAEIKRAQKAEREATDLKGTMRKRMEFLDLD 128
>XP_010033722.1 PREDICTED: sm-like protein LSM1B [Eucalyptus grandis] KCW53521.1
hypothetical protein EUGRSUZ_J02801 [Eucalyptus grandis]
Length = 128
Score = 75.5 bits (184), Expect = 9e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHM RV+TAEI+RAQKAEREASDLKGTMRKRMEFLDLD
Sbjct: 90 PPHMRRVSTAEIRRAQKAEREASDLKGTMRKRMEFLDLD 128
>XP_002304120.1 small nuclear ribonucleoprotein [Populus trichocarpa] EEE79099.1
small nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 75.5 bits (184), Expect = 9e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREA+DLKGTMRKRMEFLDLD
Sbjct: 90 PPHMTRVSEAEIKRAQKAEREATDLKGTMRKRMEFLDLD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>XP_006598838.1 PREDICTED: sm-like protein LSM1B [Glycine max] KRH06211.1
hypothetical protein GLYMA_16G009500 [Glycine max]
Length = 95
Score = 74.3 bits (181), Expect = 1e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
P HMTRV+TAEIKRAQKAEREASDLKGTMRKRMEFLD D
Sbjct: 57 PEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 95
>XP_014516656.1 PREDICTED: sm-like protein LSM1B isoform X2 [Vigna radiata var.
radiata]
Length = 116
Score = 74.3 bits (181), Expect = 2e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
P HMTRV+TAEIKRAQKAEREASDLKGTMRKRMEFLD D
Sbjct: 78 PEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 116
>KYP50472.1 U6 snRNA-associated Sm-like protein LSm1 [Cajanus cajan]
Length = 128
Score = 74.3 bits (181), Expect = 2e-14
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
P HMTRV+TAEIKRAQKAEREASDLKGTMRKRMEFLDL+
Sbjct: 90 PEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDLE 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>XP_015902522.1 PREDICTED: sm-like protein LSM1B [Ziziphus jujuba]
Length = 128
Score = 74.3 bits (181), Expect = 2e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREA+DLKG+MRKRMEFLDLD
Sbjct: 90 PPHMTRVSAAEIKRAQKAEREATDLKGSMRKRMEFLDLD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>XP_014516657.1 PREDICTED: sm-like protein LSM1B [Vigna radiata var. radiata]
Length = 128
Score = 74.3 bits (181), Expect = 2e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
P HMTRV+TAEIKRAQKAEREASDLKGTMRKRMEFLD D
Sbjct: 90 PEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>XP_011012019.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Populus euphratica]
Length = 128
Score = 74.3 bits (181), Expect = 2e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEI+RAQKAEREA+DLKGTMRKRMEFLDLD
Sbjct: 90 PPHMTRVSEAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
>XP_007135420.1 hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
ESW07414.1 hypothetical protein PHAVU_010G127900g
[Phaseolus vulgaris]
Length = 128
Score = 74.3 bits (181), Expect = 2e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
P HMTRV+TAEIKRAQKAEREASDLKGTMRKRMEFLD D
Sbjct: 90 PEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>NP_001237465.1 uncharacterized protein LOC100306352 [Glycine max] XP_007135419.1
hypothetical protein PHAVU_010G127800g [Phaseolus
vulgaris] XP_014516654.1 PREDICTED: sm-like protein
LSM1B isoform X1 [Vigna radiata var. radiata] ACU14485.1
unknown [Glycine max] ESW07413.1 hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris] KHN01428.1 U6
snRNA-associated Sm-like protein LSm1 [Glycine soja]
KHN39613.1 U6 snRNA-associated Sm-like protein LSm1
[Glycine soja] KRH47635.1 hypothetical protein
GLYMA_07G040900 [Glycine max]
Length = 128
Score = 74.3 bits (181), Expect = 2e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
P HMTRV+TAEIKRAQKAEREASDLKGTMRKRMEFLD D
Sbjct: 90 PEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25
>XP_006369123.1 small nuclear ribonucleoprotein [Populus trichocarpa] ABK96777.1
unknown [Populus trichocarpa x Populus deltoides]
ERP65692.1 small nuclear ribonucleoprotein [Populus
trichocarpa]
Length = 128
Score = 74.3 bits (181), Expect = 2e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEI+RAQKAEREA+DLKGTMRKRMEFLDLD
Sbjct: 90 PPHMTRVSEAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
Score = 52.4 bits (124), Expect = 7e-06
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLA+YLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLV 25
>XP_018839212.1 PREDICTED: sm-like protein LSM1B [Juglans regia]
Length = 128
Score = 73.9 bits (180), Expect = 4e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREA+DLKG+MRKRMEFLDLD
Sbjct: 90 PPHMTRVSEAEIKRAQKAEREATDLKGSMRKRMEFLDLD 128
Score = 53.1 bits (126), Expect = 3e-06
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPED+YLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLV 25
>XP_018835043.1 PREDICTED: sm-like protein LSM1B [Juglans regia]
Length = 128
Score = 73.9 bits (180), Expect = 4e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = -3
Query: 164 PPHMTRVATAEIKRAQKAEREASDLKGTMRKRMEFLDLD 48
PPHMTRV+ AEIKRAQKAEREA+DLKG+MRKRMEFLDLD
Sbjct: 90 PPHMTRVSEAEIKRAQKAEREATDLKGSMRKRMEFLDLD 128
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 364 MSWAGPEDIYLSTSLASYLDKKLLV 290
MSWAGPEDIYLSTSLASYLDKKLLV
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLV 25