BLASTX nr result
ID: Glycyrrhiza31_contig00000701
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza31_contig00000701
(3798 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027304.1 RNA polymerase alpha subunit (chloroplast) [Glycy... 646 0.0
AMC32270.1 RNA polymerase alpha subunit (chloroplast) [Glycyrrhi... 644 0.0
YP_009109843.1 RNA polymerase alpha subunit (chloroplast) [Trifo... 578 0.0
AJE71609.1 RNA polymerase alpha subunit (plastid) [Melilotus off... 577 0.0
YP_009109918.1 RNA polymerase alpha subunit (chloroplast) [Trifo... 576 0.0
YP_009334221.1 RpoA (chloroplast) [Caragana microphylla] APL9742... 573 0.0
AIJ28052.1 RNA polymerase alpha subunit (chloroplast) [Trifolium... 572 0.0
AIJ28178.1 RNA polymerase alpha subunit (chloroplast) [Trifolium... 571 0.0
YP_009141641.1 RNA polymerase alpha subunit (chloroplast) [Medic... 570 0.0
YP_009027180.1 RNA polymerase alpha subunit [Trifolium repens] A... 570 0.0
AJE72106.1 RNA polymerase alpha subunit (plastid) [Trifolium pra... 569 0.0
YP_009327917.1 RNA polymerase alpha subunit (chloroplast) [Medic... 568 0.0
AHY33091.1 RNA polymerase alpha subunit (chloroplast) [Indigofer... 568 0.0
ANS57936.1 RNA polymerase alpha subunit (chloroplast) [Medicago ... 567 0.0
YP_001381697.1 RNA polymerase alpha subunit [Medicago truncatula... 567 0.0
AJE72745.1 RNA polymerase alpha subunit (plastid) [Astragalus cr... 564 0.0
AGV52573.1 RNA polymerase alpha subunit (chloroplast) [Medicago ... 563 0.0
YP_009175791.1 RNA polymerase alpha subunit (chloroplast) [Astra... 563 0.0
AHY32925.1 RNA polymerase alpha subunit (chloroplast) [Ceratonia... 562 0.0
YP_008145375.1 RNA polymerase alpha subunit (chloroplast) [Glyci... 562 0.0
>YP_009027304.1 RNA polymerase alpha subunit (chloroplast) [Glycyrrhiza glabra]
AGU00101.1 RNA polymerase alpha subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 336
Score = 646 bits (1667), Expect = 0.0
Identities = 325/336 (96%), Positives = 325/336 (96%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR
Sbjct: 121 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL
Sbjct: 241 NNQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 300
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA
Sbjct: 301 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 336
>AMC32270.1 RNA polymerase alpha subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 336
Score = 644 bits (1661), Expect = 0.0
Identities = 323/336 (96%), Positives = 324/336 (96%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR
Sbjct: 121 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL
Sbjct: 241 NNQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 300
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
SELYNT PEDLMKIEHLRVKDVNFILT+LRIKEHFA
Sbjct: 301 SELYNTRPEDLMKIEHLRVKDVNFILTILRIKEHFA 336
>YP_009109843.1 RNA polymerase alpha subunit (chloroplast) [Trifolium glanduliferum]
AIJ27883.1 RNA polymerase alpha subunit (chloroplast)
[Trifolium glanduliferum]
Length = 333
Score = 578 bits (1489), Expect = 0.0
Identities = 291/336 (86%), Positives = 304/336 (90%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REK+KVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKIKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSN+YGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNMYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRK KK EIG KS+FIDQL+ PPRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKTKK---EIGLKSIFIDQLELPPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH RV+DV IL +L+I++HFA
Sbjct: 298 LELLNKSEEDLMKIEHFRVEDVKNILNILQIEKHFA 333
>AJE71609.1 RNA polymerase alpha subunit (plastid) [Melilotus officinalis]
AJE71680.1 RNA polymerase alpha subunit (plastid)
[Melilotus albus]
Length = 333
Score = 577 bits (1486), Expect = 0.0
Identities = 293/336 (87%), Positives = 303/336 (90%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEIID TQHIANLTEPIN SI LQIER RGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIIDNTQHIANLTEPINFSIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EI KS+FIDQL+ PPRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKK---EIALKSIFIDQLELPPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH RV+DV IL +L+I++HFA
Sbjct: 298 LELLNKSQEDLMKIEHFRVEDVKNILNILQIEKHFA 333
>YP_009109918.1 RNA polymerase alpha subunit (chloroplast) [Trifolium strictum]
AIJ28385.1 RNA polymerase alpha subunit (chloroplast)
[Trifolium strictum]
Length = 333
Score = 576 bits (1484), Expect = 0.0
Identities = 292/336 (86%), Positives = 303/336 (90%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRK KK EIG KS+FIDQL+ PPRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKTKK---EIGLKSIFIDQLELPPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH RV+DV IL +L+I++HFA
Sbjct: 298 LELLNKSEEDLMKIEHFRVEDVKNILNILQIEKHFA 333
>YP_009334221.1 RpoA (chloroplast) [Caragana microphylla] APL97428.1 RpoA
(chloroplast) [Caragana microphylla]
Length = 333
Score = 573 bits (1476), Expect = 0.0
Identities = 290/336 (86%), Positives = 302/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D QHIA LTEPINL + LQIERNRGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNRQHIAKLTEPINLCMELQIERNRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPL +HDRL KD LRKNKK EI KS+FIDQL+ PPRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLLTFHDRLVKDKLRKNKK---EIALKSIFIDQLELPPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
SEL N S EDLMK+EH RV+DV IL +L+IK+HFA
Sbjct: 298 SELLNKSQEDLMKMEHFRVEDVKQILNILQIKKHFA 333
>AIJ28052.1 RNA polymerase alpha subunit (chloroplast) [Trifolium lupinaster]
Length = 333
Score = 572 bits (1473), Expect = 0.0
Identities = 290/336 (86%), Positives = 301/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKTL N QDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERERGYRIKTLENSQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EIG KS+FIDQL+ PPRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKK---EIGLKSIFIDQLELPPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMK+EH RV+DV IL +L+I +HFA
Sbjct: 298 LELLNKSQEDLMKMEHFRVEDVKNILNILQIDKHFA 333
>AIJ28178.1 RNA polymerase alpha subunit (chloroplast) [Trifolium occidentale]
Length = 333
Score = 571 bits (1472), Expect = 0.0
Identities = 288/336 (85%), Positives = 303/336 (90%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKT++NIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTIDNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQE+LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEMLFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EIG KS+FIDQL+ PPRIYNCLKK+NI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKK---EIGLKSIFIDQLELPPRIYNCLKKANIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMK+EH RV+DV IL +L+I +HFA
Sbjct: 298 LELLNKSQEDLMKMEHFRVEDVKNILNILQIDKHFA 333
>YP_009141641.1 RNA polymerase alpha subunit (chloroplast) [Medicago hybrida]
YP_009141716.1 RNA polymerase alpha subunit (chloroplast)
[Medicago papillosa] AIL56166.1 RNA polymerase alpha
subunit (chloroplast) [Medicago hybrida] AIL56241.1 RNA
polymerase alpha subunit (chloroplast) [Medicago
papillosa] AMC32273.1 RNA polymerase alpha subunit
(chloroplast) [Medicago sativa]
Length = 333
Score = 570 bits (1470), Expect = 0.0
Identities = 290/336 (86%), Positives = 302/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVL+SNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EI KS+FIDQL+ PRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLLKDKLRKNKK---EIALKSIFIDQLELSPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEHLRV+DV IL +L+I++HFA
Sbjct: 298 LELLNKSQEDLMKIEHLRVEDVKNILNILQIEKHFA 333
>YP_009027180.1 RNA polymerase alpha subunit [Trifolium repens] AGO63607.1 RNA
polymerase alpha subunit (plastid) [Trifolium repens]
AJE72603.1 RNA polymerase alpha subunit (plastid)
[Trifolium repens]
Length = 333
Score = 570 bits (1469), Expect = 0.0
Identities = 287/336 (85%), Positives = 304/336 (90%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKT++NIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTIDNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQE+LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEMLFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENFNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRK+KK EIG++S+FIDQL+ PPRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKSKK---EIGFQSIFIDQLELPPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMK+EH RV+DV IL +L+I +HFA
Sbjct: 298 LELLNKSQEDLMKMEHFRVEDVKNILNILQIDKHFA 333
>AJE72106.1 RNA polymerase alpha subunit (plastid) [Trifolium pratense]
Length = 333
Score = 569 bits (1466), Expect = 0.0
Identities = 288/336 (85%), Positives = 302/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVST+TLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTQTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKT++NIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTIDNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRK KK EIG KS+FIDQL+ PPRIYNCLKKS+I+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKKKK---EIGLKSIFIDQLELPPRIYNCLKKSDIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH RV+DV IL +L+I +HFA
Sbjct: 298 LELLNKSQEDLMKIEHFRVEDVQNILNILQIDKHFA 333
>YP_009327917.1 RNA polymerase alpha subunit (chloroplast) [Medicago falcata]
AOG66174.1 RNA polymerase alpha subunit (chloroplast)
[Medicago sativa] APC60461.1 RNA polymerase alpha subunit
(chloroplast) [Medicago falcata]
Length = 333
Score = 568 bits (1464), Expect = 0.0
Identities = 289/336 (86%), Positives = 301/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVL+SNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANL EPINL I LQIER RGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLIEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EI KS+FIDQL+ PRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLLKDKLRKNKK---EIALKSIFIDQLELSPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEHLRV+DV IL +L+I++HFA
Sbjct: 298 LELLNKSQEDLMKIEHLRVEDVKNILNILQIEKHFA 333
>AHY33091.1 RNA polymerase alpha subunit (chloroplast) [Indigofera tinctoria]
Length = 333
Score = 568 bits (1463), Expect = 0.0
Identities = 287/336 (85%), Positives = 301/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
MVREKV+VSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQES+HEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL IGLQIERNRGY IKTL N+QDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIGLQIERNRGYGIKTLKNLQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HD LAK LRKNKK EI KS+FIDQL+ PPRIYNCLK+SNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDILAKAKLRKNKK---EIALKSIFIDQLELPPRIYNCLKRSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH RV+DV IL +L I++HFA
Sbjct: 298 LELLNKSREDLMKIEHFRVEDVKHILEILEIEKHFA 333
>ANS57936.1 RNA polymerase alpha subunit (chloroplast) [Medicago sativa]
Length = 333
Score = 567 bits (1461), Expect = 0.0
Identities = 289/336 (86%), Positives = 301/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVL+SNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEAL EASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALSEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EI KS+FIDQL+ PRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLLKDKLRKNKK---EIALKSIFIDQLELSPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEHLRV+DV IL +L+I++HFA
Sbjct: 298 LELLNKSQEDLMKIEHLRVEDVKNILNILQIEKHFA 333
>YP_001381697.1 RNA polymerase alpha subunit [Medicago truncatula] AFR59943.1 RNA
polymerase alpha subunit (plastid) [Medicago truncatula]
AFR60019.1 RNA polymerase alpha subunit (plastid)
[Medicago truncatula] AFR60095.1 RNA polymerase alpha
subunit (plastid) [Medicago truncatula]
Length = 333
Score = 567 bits (1461), Expect = 0.0
Identities = 288/336 (85%), Positives = 300/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVS RTLQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSARTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVL+SNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EI KS+FIDQL+ PRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLLKDKLRKNKK---EIALKSIFIDQLELSPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH RV+DV IL +L+I++HFA
Sbjct: 298 LELLNKSQEDLMKIEHFRVEDVKNILNILQIEKHFA 333
>AJE72745.1 RNA polymerase alpha subunit (plastid) [Astragalus crassicarpus]
Length = 333
Score = 564 bits (1454), Expect = 0.0
Identities = 287/336 (85%), Positives = 300/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+ EKVKVSTRTLQWKCVESRVDSK LYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIGEKVKVSTRTLQWKCVESRVDSKHLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICF+GPGY+TAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFQGPGYLTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIERNRGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDDTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EI S+FIDQL+ PPRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKK---EIPLNSIFIDQLELPPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH RV+DV IL +L+I++ FA
Sbjct: 298 LELLNKSQEDLMKIEHFRVEDVKNILNILQIEKDFA 333
>AGV52573.1 RNA polymerase alpha subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 335
Score = 563 bits (1451), Expect = 0.0
Identities = 288/338 (85%), Positives = 301/338 (89%), Gaps = 2/338 (0%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+REKVKVS RTLQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIREKVKVSARTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVL+SNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIER RGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQ--EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXX 2820
NANHSIHSYVNGNEKQ EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEIEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLN 240
Query: 2821 XXXXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNIN 3000
QHKVTLPLF +HDRL KD LRKNKK EI +KS+FIDQL+ PRIYNCLKKSNI+
Sbjct: 241 FENNQHKVTLPLFTFHDRLLKDKLRKNKK---EIAFKSIFIDQLELSPRIYNCLKKSNIH 297
Query: 3001 TLSELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
TL EL N S EDLMKIEH RV+DV IL +L+I++HFA
Sbjct: 298 TLLELLNKSQEDLMKIEHFRVEDVKNILNILQIEKHFA 335
>YP_009175791.1 RNA polymerase alpha subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] YP_009242985.1 RNA polymerase alpha
subunit (chloroplast) [Astragalus mongholicus] ALH42762.1
RNA polymerase alpha subunit (chloroplast) [Astragalus
mongholicus var. nakaianus] AMQ99248.1 RNA polymerase
alpha subunit (chloroplast) [Astragalus mongholicus]
ANK78919.1 RNA polymerase alpha subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 333
Score = 563 bits (1450), Expect = 0.0
Identities = 287/336 (85%), Positives = 299/336 (88%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
M+ EKVKVST TLQWKCVESRVDSK LYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
Sbjct: 1 MIGEKVKVSTGTLQWKCVESRVDSKHLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICF+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFQGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL I LQIERNRGYRIKTLNNIQDGSY IDAVFMPVR
Sbjct: 121 IILPPSVEIVDDTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL KD LRKNKK EI S+FIDQL+ PPRIYNCLKKSNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKK---EIPLNSIFIDQLELPPRIYNCLKKSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH RV+DV IL +L+I++ FA
Sbjct: 298 VELLNKSQEDLMKIEHFRVEDVKNILNILQIEKDFA 333
>AHY32925.1 RNA polymerase alpha subunit (chloroplast) [Ceratonia siliqua]
Length = 331
Score = 562 bits (1449), Expect = 0.0
Identities = 284/336 (84%), Positives = 300/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
MVREKV+VSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITRAK EK+PHEYSTIVGIQES+HEILMNLK+IVLRSNLYGT+DASIC KGPGYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIQESVHEILMNLKKIVLRSNLYGTQDASICVKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIANLTEPINL IGLQIERNRGYRIKTLNN QDGSYPIDAVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIGLQIERNRGYRIKTLNNFQDGSYPIDAVFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHADEENLNLE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HDRL K LRKNKK EI KS+FIDQL+ PPRIYNCLK+SNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDRLVK--LRKNKK---EIALKSIFIDQLELPPRIYNCLKRSNIHTL 295
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMKIEH R++DV IL +L I++HFA
Sbjct: 296 LELLNKSQEDLMKIEHFRIEDVKRILDILEIEKHFA 331
>YP_008145375.1 RNA polymerase alpha subunit (chloroplast) [Glycine tomentella]
AGO44272.1 RNA polymerase alpha subunit (chloroplast)
[Glycine tomentella]
Length = 333
Score = 562 bits (1449), Expect = 0.0
Identities = 277/336 (82%), Positives = 300/336 (89%)
Frame = +1
Query: 2107 MVREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 2286
MVREK++VSTRTLQWKCVESR+DSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKIRVSTRTLQWKCVESRIDSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 2287 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 2466
CITR K EKIPHEYSTI+GI+ES+HEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
Sbjct: 61 CITRVKSEKIPHEYSTIIGIEESVHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 2467 IILPPSVEIIDKTQHIANLTEPINLSIGLQIERNRGYRIKTLNNIQDGSYPIDAVFMPVR 2646
IILPPSVEI+D TQHIAN+TEP+NL I L+IERNRGYRIKTL N QDGSYPIDA+FMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANVTEPVNLCIELKIERNRGYRIKTLKNFQDGSYPIDAIFMPVR 180
Query: 2647 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAXXXXXXXX 2826
N NHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA
Sbjct: 181 NVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEDKFNLE 240
Query: 2827 XXQHKVTLPLFAYHDRLAKDNLRKNKKEIIEIGWKSVFIDQLDFPPRIYNCLKKSNINTL 3006
QHKVTLPLF +HD LAK+ LRKNKK EI KS+FIDQL+ PPRIYNCLK+SNI+TL
Sbjct: 241 NNQHKVTLPLFTFHDILAKEKLRKNKK---EIALKSIFIDQLELPPRIYNCLKRSNIHTL 297
Query: 3007 SELYNTSPEDLMKIEHLRVKDVNFILTVLRIKEHFA 3114
EL N S EDLMK+EH RV+DV +IL L I++HFA
Sbjct: 298 LELLNNSQEDLMKLEHFRVEDVKYILDFLEIEKHFA 333