BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00040843
         (491 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU28773.1 hypothetical protein TSUD_357590 [Trifolium subterran...    54   4e-07
KYP61726.1 Putative ribonuclease H protein At1g65750 family [Caj...    50   1e-06
KYP54863.1 Putative ribonuclease H protein At1g65750 family [Caj...    50   2e-06
KYP64536.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]        51   2e-06
GAU28852.1 hypothetical protein TSUD_21890 [Trifolium subterraneum]    45   4e-06
KYP49479.1 hypothetical protein KK1_028760 [Cajanus cajan]             53   4e-06

>GAU28773.1 hypothetical protein TSUD_357590 [Trifolium subterraneum]
          Length = 813

 Score = 54.3 bits (129), Expect(2) = 4e-07
 Identities = 24/54 (44%), Positives = 29/54 (53%)
 Frame = +2

Query: 326 STVADFGCWRDGLGCWNRNWRRNLFQWEDDQLRDLQLIIQAGLKGEGCDSWFWK 487
           STV + G W +G   W+  WRRNLF WE + L  L  I+         DSWFWK
Sbjct: 586 STVGEMGSWVEGHWVWDLRWRRNLFVWELNILESLHEILNHSTISAADDSWFWK 639



 Score = 26.9 bits (58), Expect(2) = 4e-07
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 228 LCWWSPYFGLLWLDGGPLCTRFPRLFSIN 314
           L  W  +    WL G PL T+F RLF ++
Sbjct: 553 LVQWGRWVVGXWLGGVPLRTQFQRLFQVS 581


>KYP61726.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 554

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 329 TVADFGCWRDGLGCWNRNWRRNLFQWEDDQLRDLQLII-QAGLKGEGCDSWFWK 487
           +VA+   WRDG   W  +WRR+LFQWE D L  L   +    LK + CD W WK
Sbjct: 313 SVANMVLWRDGGFEWIWSWRRSLFQWELDLLSQLAADLGSTVLKNDCCDRWCWK 366



 Score = 29.3 bits (64), Expect(2) = 1e-06
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 261 WLDGGPLCTRFPRLFSINLD 320
           W   GPLC R+ RLFSI  D
Sbjct: 290 WSGQGPLCNRYSRLFSIASD 309


>KYP54863.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 648

 Score = 49.7 bits (117), Expect(2) = 2e-06
 Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 329 TVADFGCWRDGLGCWNRNWRRNLFQWEDDQLRDLQLII-QAGLKGEGCDSWFWK 487
           +VA+   WRDG   W  +WRR+LFQWE D L  L   +    LK + CD W WK
Sbjct: 376 SVANMVLWRDGGFEWIWSWRRSLFQWELDLLSQLAADLGSIVLKNDCCDRWCWK 429



 Score = 29.3 bits (64), Expect(2) = 2e-06
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 261 WLDGGPLCTRFPRLFSINLD 320
           W   GPLC R+ RLFSI  D
Sbjct: 353 WSGQGPLCNRYSRLFSIASD 372


>KYP64536.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 502

 Score = 50.8 bits (120), Expect(2) = 2e-06
 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 326 STVADFGCWRDGLGCWNRNWRRNLFQWEDDQLRDLQLIIQA-GLKGEGCDSWFWK 487
           +T+AD    R+G   WN  WRR+LFQWE++QL+ L L +Q+  L  E  D W WK
Sbjct: 317 TTLADMCLRREGSVVWNWCWRRDLFQWEEEQLQLLYLELQSVKLFEEKSDGWRWK 371



 Score = 28.1 bits (61), Expect(2) = 2e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 216 LEFNLCWWSPYFGLLWLDGGPLCTRFPRLFSIN 314
           L FN  +W      +W   G L TR+ RL+SI+
Sbjct: 284 LSFNTMFWDD----VWYGSGALSTRYARLYSIS 312


>GAU28852.1 hypothetical protein TSUD_21890 [Trifolium subterraneum]
          Length = 836

 Score = 45.1 bits (105), Expect(2) = 4e-06
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 329 TVADFGCWRDGLGCWNRNWRRNLFQWEDDQLRDLQLIIQAGLK-GEGCDSWFWK 487
           TV+DF     G+  W   WRR LF WED+ L  L+ ++  GL   E  D W W+
Sbjct: 610 TVSDFWADSGGVYRWEFRWRRRLFVWEDELLLSLRDVLPMGLAFSEVEDEWLWR 663



 Score = 32.7 bits (73), Expect(2) = 4e-06
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 261 WLDGGPLCTRFPRLFSINL 317
           WL   PLC +FPRLFSI+L
Sbjct: 587 WLGNRPLCEQFPRLFSISL 605


>KYP49479.1 hypothetical protein KK1_028760 [Cajanus cajan]
          Length = 237

 Score = 53.1 bits (126), Expect(2) = 4e-06
 Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 326 STVADFGCWRDGLGCWNRNWRRNLFQWEDDQLRDLQLIIQA-GLKGEGCDSWFWK 487
           +T+AD    R+G   WN  WRR+LFQWE+DQL+ L L +Q+  L  E  D W WK
Sbjct: 29  TTLADLCLRREGSVVWNWCWRRDLFQWEEDQLQLLYLELQSVKLSEEKFDGWRWK 83



 Score = 24.6 bits (52), Expect(2) = 4e-06
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 258 LWLDGGPLCTRFPRLFSINLD 320
           +W   G L TR+ RL+SI+++
Sbjct: 6   VWNGSGALSTRYARLYSISIN 26