BLASTX nr result
ID: Glycyrrhiza30_contig00040204
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00040204
(287 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_003524637.2 PREDICTED: general transcription factor IIF subun... 117 2e-30
KHN20433.1 General transcription factor IIF subunit 2 [Glycine s... 116 4e-30
XP_007151782.1 hypothetical protein PHAVU_004G074500g [Phaseolus... 107 1e-26
KYP50910.1 hypothetical protein KK1_027269 [Cajanus cajan] 102 8e-26
XP_014506229.1 PREDICTED: general transcription factor IIF subun... 105 1e-25
XP_017440080.1 PREDICTED: general transcription factor IIF subun... 104 1e-25
XP_018828694.1 PREDICTED: general transcription factor IIF subun... 96 6e-22
XP_016201024.1 PREDICTED: general transcription factor IIF subun... 91 3e-20
XP_015967922.1 PREDICTED: general transcription factor IIF subun... 91 3e-20
XP_019459446.1 PREDICTED: general transcription factor IIF subun... 88 5e-19
XP_015877159.1 PREDICTED: general transcription factor IIF subun... 86 2e-18
XP_010658424.1 PREDICTED: transcription initiation factor IIF su... 85 3e-18
XP_002274802.1 PREDICTED: general transcription factor IIF subun... 85 6e-18
XP_004498699.2 PREDICTED: general transcription factor IIF subun... 84 7e-18
CBI31490.3 unnamed protein product, partial [Vitis vinifera] 85 1e-17
XP_008233347.1 PREDICTED: general transcription factor IIF subun... 80 5e-16
XP_007220710.1 hypothetical protein PRUPE_ppa021341mg [Prunus pe... 80 5e-16
XP_002534300.1 PREDICTED: general transcription factor IIF subun... 80 6e-16
XP_012086509.1 PREDICTED: general transcription factor IIF subun... 78 2e-15
KNA10990.1 hypothetical protein SOVF_139270 [Spinacia oleracea] 75 3e-14
>XP_003524637.2 PREDICTED: general transcription factor IIF subunit 2-like [Glycine
max] KRH57771.1 hypothetical protein GLYMA_05G083300
[Glycine max]
Length = 263
Score = 117 bits (293), Expect = 2e-30
Identities = 64/93 (68%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Frame = +3
Query: 18 MEDQCGS--KHHSSN-GIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPSDPSRPVAKVVV 188
MEDQCG KH ++N G VDTSKAERAVWLMKCPP+VSRSLRAPPSDPSRPVAKVVV
Sbjct: 1 MEDQCGGNGKHMNTNTNSNGYVDTSKAERAVWLMKCPPLVSRSLRAPPSDPSRPVAKVVV 60
Query: 189 XXXXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
QFTMELA TEAGHIP+CY
Sbjct: 61 -SIDPLNSNDDDSPPQFTMELAGTEAGHIPRCY 92
>KHN20433.1 General transcription factor IIF subunit 2 [Glycine soja]
Length = 265
Score = 116 bits (291), Expect = 4e-30
Identities = 64/95 (67%), Positives = 68/95 (71%), Gaps = 5/95 (5%)
Frame = +3
Query: 18 MEDQCGS--KHHSSN---GIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPSDPSRPVAKV 182
MEDQCG KH ++N G VDTSKAERAVWLMKCPP+VSRSLRAPPSDPSRPVAKV
Sbjct: 1 MEDQCGGNGKHMNTNTNTNSNGYVDTSKAERAVWLMKCPPLVSRSLRAPPSDPSRPVAKV 60
Query: 183 VVXXXXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
VV QFTMELA TEAGHIP+CY
Sbjct: 61 VV-SIDPLNSNDDDSPPQFTMELAGTEAGHIPRCY 94
>XP_007151782.1 hypothetical protein PHAVU_004G074500g [Phaseolus vulgaris]
ESW23776.1 hypothetical protein PHAVU_004G074500g
[Phaseolus vulgaris]
Length = 259
Score = 107 bits (267), Expect = 1e-26
Identities = 61/92 (66%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +3
Query: 18 MEDQCG--SKHHSSNGIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPSDPSRPVAKVVVX 191
MEDQ G S ++N VDTSKAERAVWLMKCPP+VSRS RAPPSDPSRPVAKVVV
Sbjct: 1 MEDQGGGGSTKQTNNAY---VDTSKAERAVWLMKCPPLVSRSFRAPPSDPSRPVAKVVV- 56
Query: 192 XXXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
QFTMELA TEAGHIPKCY
Sbjct: 57 SIDPLNSNDDDSPPQFTMELAGTEAGHIPKCY 88
>KYP50910.1 hypothetical protein KK1_027269 [Cajanus cajan]
Length = 164
Score = 102 bits (255), Expect = 8e-26
Identities = 59/90 (65%), Positives = 61/90 (67%)
Frame = +3
Query: 18 MEDQCGSKHHSSNGIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPSDPSRPVAKVVVXXX 197
MEDQ SKH + VDTSKAERAVWLMKCPP+VSRSLRAP PSRPVAKVVV
Sbjct: 1 MEDQVSSKH--TTNAAAYVDTSKAERAVWLMKCPPLVSRSLRAP---PSRPVAKVVV-SI 54
Query: 198 XXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
QFTMELA TEAGHIPKCY
Sbjct: 55 DPLNSNDDDSPPQFTMELAGTEAGHIPKCY 84
>XP_014506229.1 PREDICTED: general transcription factor IIF subunit 2-like [Vigna
radiata var. radiata]
Length = 263
Score = 105 bits (261), Expect = 1e-25
Identities = 61/97 (62%), Positives = 63/97 (64%), Gaps = 7/97 (7%)
Frame = +3
Query: 18 MEDQCGSKHHSSNGIGGD-------VDTSKAERAVWLMKCPPVVSRSLRAPPSDPSRPVA 176
MEDQ G G GG VDTSKAERAVWLMKCPP+VSR LRAPPSDPSRPVA
Sbjct: 1 MEDQGGG----GGGGGGTKQTNNSYVDTSKAERAVWLMKCPPLVSRCLRAPPSDPSRPVA 56
Query: 177 KVVVXXXXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
KVVV QFTMELA TEAGHIP+CY
Sbjct: 57 KVVV-SIDPLNSNDDDSPPQFTMELAGTEAGHIPRCY 92
>XP_017440080.1 PREDICTED: general transcription factor IIF subunit 2-like [Vigna
angularis] KOM56096.1 hypothetical protein
LR48_Vigan10g198800 [Vigna angularis] BAU01666.1
hypothetical protein VIGAN_11094100 [Vigna angularis
var. angularis]
Length = 259
Score = 104 bits (260), Expect = 1e-25
Identities = 58/90 (64%), Positives = 60/90 (66%)
Frame = +3
Query: 18 MEDQCGSKHHSSNGIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPSDPSRPVAKVVVXXX 197
MEDQ G VDTSKAERAVWLMKCPP+VSR LRAPPSDPSRPVAKVVV
Sbjct: 1 MEDQGGGGGTKQTN-NAYVDTSKAERAVWLMKCPPLVSRCLRAPPSDPSRPVAKVVV-SI 58
Query: 198 XXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
QFTMELA TEAGHIP+CY
Sbjct: 59 DPLNSNDDDSPPQFTMELAGTEAGHIPRCY 88
>XP_018828694.1 PREDICTED: general transcription factor IIF subunit 2 [Juglans
regia]
Length = 271
Score = 95.5 bits (236), Expect = 6e-22
Identities = 54/98 (55%), Positives = 66/98 (67%), Gaps = 8/98 (8%)
Frame = +3
Query: 18 MEDQCGS-KHHSSNGIGGDV-----DTSKAERAVWLMKCPPVVSRSLRAPPS--DPSRPV 173
M++Q GS + NG G ++ DTSKAERA+WLMKCPP+VSRSL++PP DP+RPV
Sbjct: 1 MDEQGGSTRSGQKNGNGNNIIDEFLDTSKAERAMWLMKCPPLVSRSLQSPPDAPDPARPV 60
Query: 174 AKVVVXXXXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
AKVV+ QFTMELA TE+GHIPKCY
Sbjct: 61 AKVVL--SIDPLRSNDDSSPQFTMELAGTESGHIPKCY 96
>XP_016201024.1 PREDICTED: general transcription factor IIF subunit 2-like [Arachis
ipaensis]
Length = 283
Score = 91.3 bits (225), Expect = 3e-20
Identities = 50/83 (60%), Positives = 58/83 (69%), Gaps = 4/83 (4%)
Frame = +3
Query: 51 SNGIGGDVDTSKAERAVWLMKCPPVVSRSLRA-PPSDPSRPVAKVVV---XXXXXXXXXX 218
S G GG ++TSKAERA+WLMKCPP+VSR L A P SDPSRPVAKV+V
Sbjct: 29 SYGYGGYLETSKAERAMWLMKCPPLVSRCLGASPSSDPSRPVAKVIVSIDPLNNSDNSSS 88
Query: 219 XXXXXQFTMELAATEAGHIPKCY 287
QFTMELAATEAG+IP+C+
Sbjct: 89 DDSPPQFTMELAATEAGNIPRCF 111
>XP_015967922.1 PREDICTED: general transcription factor IIF subunit 2-like [Arachis
duranensis]
Length = 286
Score = 91.3 bits (225), Expect = 3e-20
Identities = 50/83 (60%), Positives = 58/83 (69%), Gaps = 4/83 (4%)
Frame = +3
Query: 51 SNGIGGDVDTSKAERAVWLMKCPPVVSRSLRA-PPSDPSRPVAKVVV---XXXXXXXXXX 218
S G GG ++TSKAERA+WLMKCPP+VSR L A P SDPSRPVAKV+V
Sbjct: 32 SYGYGGYLETSKAERAMWLMKCPPLVSRCLGASPSSDPSRPVAKVIVSIDPLNNSDNSSS 91
Query: 219 XXXXXQFTMELAATEAGHIPKCY 287
QFTMELAATEAG+IP+C+
Sbjct: 92 DDSPPQFTMELAATEAGNIPRCF 114
>XP_019459446.1 PREDICTED: general transcription factor IIF subunit 2 [Lupinus
angustifolius] XP_019459447.1 PREDICTED: general
transcription factor IIF subunit 2 [Lupinus
angustifolius] OIW01462.1 hypothetical protein
TanjilG_30936 [Lupinus angustifolius]
Length = 268
Score = 87.8 bits (216), Expect = 5e-19
Identities = 53/100 (53%), Positives = 64/100 (64%), Gaps = 10/100 (10%)
Frame = +3
Query: 18 MEDQCGS-----KHHS----SNGIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPS-DPSR 167
ME+Q S +HH+ +N VDT+KAERAVWL+KCP +VSRSLR+ PS DPS
Sbjct: 1 MEEQGSSNINTKQHHNQATTTNNNNTYVDTTKAERAVWLLKCPSIVSRSLRSSPSDDPSL 60
Query: 168 PVAKVVVXXXXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
P+AKVV+ QFTMELA TEAG+IPKCY
Sbjct: 61 PIAKVVL--SIDPLNSNDDDSPQFTMELAGTEAGNIPKCY 98
>XP_015877159.1 PREDICTED: general transcription factor IIF subunit 2 [Ziziphus
jujuba]
Length = 287
Score = 86.3 bits (212), Expect = 2e-18
Identities = 49/86 (56%), Positives = 55/86 (63%), Gaps = 9/86 (10%)
Frame = +3
Query: 57 GIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPS---------DPSRPVAKVVVXXXXXXX 209
G GG +DT KAERAVWLMKCPP+V RSL+ P + DPSRPVAKVVV
Sbjct: 28 GGGGVMDTMKAERAVWLMKCPPLVYRSLQPPTTHASSASSSFDPSRPVAKVVV-SIDPLR 86
Query: 210 XXXXXXXXQFTMELAATEAGHIPKCY 287
QFTMELA TE+G+IPKCY
Sbjct: 87 SNDDSSPPQFTMELAGTESGNIPKCY 112
>XP_010658424.1 PREDICTED: transcription initiation factor IIF subunit beta isoform
X2 [Vitis vinifera]
Length = 220
Score = 84.7 bits (208), Expect = 3e-18
Identities = 47/81 (58%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 48 SSNGIGGDVDTSKAERAVWLMKCPPVVSRSL-RAPPSDPSRPVAKVVVXXXXXXXXXXXX 224
SSN +VDTS++ERAVWLMKCPPVVSRSL + SD RPVAKV+V
Sbjct: 5 SSNN--ANVDTSRSERAVWLMKCPPVVSRSLSSSSASDSLRPVAKVIVSLDPLLANDDDD 62
Query: 225 XXXQFTMELAATEAGHIPKCY 287
QFTMELA TE+G+ PKCY
Sbjct: 63 SPPQFTMELAGTESGNAPKCY 83
>XP_002274802.1 PREDICTED: general transcription factor IIF subunit 2 isoform X1
[Vitis vinifera]
Length = 257
Score = 84.7 bits (208), Expect = 6e-18
Identities = 47/81 (58%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 48 SSNGIGGDVDTSKAERAVWLMKCPPVVSRSL-RAPPSDPSRPVAKVVVXXXXXXXXXXXX 224
SSN +VDTS++ERAVWLMKCPPVVSRSL + SD RPVAKV+V
Sbjct: 5 SSNN--ANVDTSRSERAVWLMKCPPVVSRSLSSSSASDSLRPVAKVIVSLDPLLANDDDD 62
Query: 225 XXXQFTMELAATEAGHIPKCY 287
QFTMELA TE+G+ PKCY
Sbjct: 63 SPPQFTMELAGTESGNAPKCY 83
>XP_004498699.2 PREDICTED: general transcription factor IIF subunit 2 [Cicer
arietinum]
Length = 249
Score = 84.3 bits (207), Expect = 7e-18
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 57 GIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPSDPSRPVAKVVVXXXXXXXXXXXXXXXQ 236
G G VDT+K+ERA+WLMKCPP+VS+SLR+PPS PS P+AKVVV +
Sbjct: 3 GGNGYVDTTKSERAIWLMKCPPLVSQSLRSPPSHPSLPLAKVVV-SIDPLKSKDDDSPPE 61
Query: 237 FTMELAATEAGHIPKCY 287
FTMEL + GH+P C+
Sbjct: 62 FTMELGGSNQGHVPTCF 78
>CBI31490.3 unnamed protein product, partial [Vitis vinifera]
Length = 300
Score = 84.7 bits (208), Expect = 1e-17
Identities = 47/81 (58%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 48 SSNGIGGDVDTSKAERAVWLMKCPPVVSRSL-RAPPSDPSRPVAKVVVXXXXXXXXXXXX 224
SSN +VDTS++ERAVWLMKCPPVVSRSL + SD RPVAKV+V
Sbjct: 48 SSNN--ANVDTSRSERAVWLMKCPPVVSRSLSSSSASDSLRPVAKVIVSLDPLLANDDDD 105
Query: 225 XXXQFTMELAATEAGHIPKCY 287
QFTMELA TE+G+ PKCY
Sbjct: 106 SPPQFTMELAGTESGNAPKCY 126
>XP_008233347.1 PREDICTED: general transcription factor IIF subunit 2 [Prunus mume]
Length = 278
Score = 80.1 bits (196), Expect = 5e-16
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 14/104 (13%)
Frame = +3
Query: 18 MEDQCGSKHHSSNG--IGGDVDTSKAERAVWLMKCPPVVSRSLR----------APPSD- 158
MEDQ + SN G ++T++AERAVWLMKCPP+V++SL+ + PSD
Sbjct: 1 MEDQKQQQRQGSNNNNANGPLETTRAERAVWLMKCPPLVAKSLKPDASSTSASASSPSDQ 60
Query: 159 -PSRPVAKVVVXXXXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
SRPVAKVV+ QFTMELAATE+G++PKCY
Sbjct: 61 QSSRPVAKVVL-SIDPLNSNEDSSSPQFTMELAATESGNMPKCY 103
>XP_007220710.1 hypothetical protein PRUPE_ppa021341mg [Prunus persica] ONI23912.1
hypothetical protein PRUPE_2G215900 [Prunus persica]
Length = 278
Score = 80.1 bits (196), Expect = 5e-16
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 14/104 (13%)
Frame = +3
Query: 18 MEDQCGSKHHSSNG--IGGDVDTSKAERAVWLMKCPPVVSRSLR----------APPSD- 158
MEDQ + SN G ++T++AERAVWLMKCPP+V++SL+ + PSD
Sbjct: 1 MEDQKQQQQQGSNNNNANGPLETTRAERAVWLMKCPPLVAKSLKPDASSTSASASSPSDQ 60
Query: 159 -PSRPVAKVVVXXXXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
SRPVAKVV+ QFTMELAATE+G++PKCY
Sbjct: 61 QSSRPVAKVVL-SIDPLNSNDDSSSPQFTMELAATESGNMPKCY 103
>XP_002534300.1 PREDICTED: general transcription factor IIF subunit 2 isoform X1
[Ricinus communis] EEF28082.1 Transcription initiation
factor IIF subunit beta, putative [Ricinus communis]
Length = 278
Score = 79.7 bits (195), Expect = 6e-16
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Frame = +3
Query: 36 SKHHSSNG---IGGDVDTSKAERAVWLMKCPPVVSRSLR----APPSDPSRPVAKVVVXX 194
SK+ S NG IGG ++T++AE+AVWLMKCP +VS SL+ +P +DPSRP+AKV++
Sbjct: 16 SKNSSGNGGVVIGGTLETARAEKAVWLMKCPALVSNSLKKNPSSPDNDPSRPIAKVIL-S 74
Query: 195 XXXXXXXXXXXXXQFTMELAATEAGHIPKCY 287
QFTMELA E+G+ PK Y
Sbjct: 75 INPLNSNDDNSSRQFTMELAGNESGNAPKSY 105
>XP_012086509.1 PREDICTED: general transcription factor IIF subunit 2 [Jatropha
curcas] KDP25732.1 hypothetical protein JCGZ_23953
[Jatropha curcas]
Length = 275
Score = 78.2 bits (191), Expect = 2e-15
Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 60 IGGDVDTSKAERAVWLMKCPPVVSRSLRAPP-SDPSRPVAKVVVXXXXXXXXXXXXXXXQ 236
IGG V+T++AE+AVWLMKCP +VSRSL+ P DPSRPVAKVV+ Q
Sbjct: 27 IGGPVETARAEKAVWLMKCPALVSRSLKNPTLDDPSRPVAKVVL-SIDPLNSGDDNSSRQ 85
Query: 237 FTMELAATEAGHIPKCY 287
FTMELA E+G+ PK Y
Sbjct: 86 FTMELADNESGNAPKSY 102
>KNA10990.1 hypothetical protein SOVF_139270 [Spinacia oleracea]
Length = 253
Score = 75.1 bits (183), Expect = 3e-14
Identities = 38/77 (49%), Positives = 50/77 (64%)
Frame = +3
Query: 57 GIGGDVDTSKAERAVWLMKCPPVVSRSLRAPPSDPSRPVAKVVVXXXXXXXXXXXXXXXQ 236
G GG +DT+KAE+AVWLMKCP VVSRSL++ PVAKV+V Q
Sbjct: 12 GGGGHIDTTKAEKAVWLMKCPAVVSRSLQSSSIPTDLPVAKVIV--SVDPLCSKSDEATQ 69
Query: 237 FTMELAATEAGHIPKCY 287
FTMEL+ ++ G++PKC+
Sbjct: 70 FTMELSGSDLGNVPKCF 86