BLASTX nr result

ID: Glycyrrhiza30_contig00039071 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00039071
         (215 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003534794.2 PREDICTED: twinkle homolog protein, chloroplastic...    54   1e-06
XP_004512933.1 PREDICTED: twinkle homolog protein, chloroplastic...    52   5e-06
KHN14293.1 DNA primase/helicase [Glycine soja]                         52   6e-06
XP_003546288.2 PREDICTED: twinkle homolog protein, chloroplastic...    52   6e-06

>XP_003534794.2 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
           [Glycine max] KHN44661.1 DNA primase/helicase [Glycine
           soja] KRH36856.1 hypothetical protein GLYMA_09G028600
           [Glycine max]
          Length = 700

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 32/65 (49%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
 Frame = -2

Query: 181 MRFRYPHKTXXXXXXXXXLATMTTQPLFHSSTPFSN------SQTHRFRARRALFTVFCS 20
           MR RY H           L TMTTQ  FHSS PF N      SQ HRF   R  FTVFCS
Sbjct: 1   MRLRYSHTLRPLLFTSSKLTTMTTQTFFHSS-PFPNLKNTLFSQRHRFPCHRPFFTVFCS 59

Query: 19  KHVSK 5
           K +S+
Sbjct: 60  KPISR 64


>XP_004512933.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
           [Cicer arietinum]
          Length = 697

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
 Frame = -2

Query: 211 LHSLFSVSQNMRFRYPHKTXXXXXXXXXLATMTTQPLFHSSTPFSNSQ------THRFRA 50
           + S+F VSQNMRFRY H             +M TQ L  +STPFSN +      THRF+ 
Sbjct: 1   MSSIF-VSQNMRFRYHHALIVPFF------SMNTQTL-SNSTPFSNLKKPLSFLTHRFQP 52

Query: 49  RRALFTVFCSK 17
           +R +FTVFCSK
Sbjct: 53  KRTIFTVFCSK 63


>KHN14293.1 DNA primase/helicase [Glycine soja]
          Length = 698

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 33/65 (50%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
 Frame = -2

Query: 181 MRFRYPHKTXXXXXXXXXLATMTTQPLFHSSTPFSN------SQTHRFRARRALFTVFCS 20
           MR RYPH T         L TM TQ LFHSS PF N      SQ  RF + R  FTVFCS
Sbjct: 1   MRLRYPH-TLLPLFTSLKLTTMNTQTLFHSS-PFPNLKNTFFSQRRRFPSHRPFFTVFCS 58

Query: 19  KHVSK 5
           K +S+
Sbjct: 59  KPISR 63


>XP_003546288.2 PREDICTED: twinkle homolog protein,
           chloroplastic/mitochondrial-like [Glycine max]
           KRH11847.1 hypothetical protein GLYMA_15G134500 [Glycine
           max]
          Length = 698

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 33/65 (50%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
 Frame = -2

Query: 181 MRFRYPHKTXXXXXXXXXLATMTTQPLFHSSTPFSN------SQTHRFRARRALFTVFCS 20
           MR RYPH T         L TM TQ LFHSS PF N      SQ  RF + R  FTVFCS
Sbjct: 1   MRLRYPH-TLLPLFTSLKLTTMNTQTLFHSS-PFPNLKNTFFSQRRRFPSHRPFFTVFCS 58

Query: 19  KHVSK 5
           K +S+
Sbjct: 59  KPISR 63


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