BLASTX nr result

ID: Glycyrrhiza30_contig00036873 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00036873
         (329 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003610808.1 PPR containing plant-like protein [Medicago trunc...    64   2e-09
XP_012574336.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   4e-08
XP_016187559.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   5e-07
XP_015960897.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   6e-07

>XP_003610808.1 PPR containing plant-like protein [Medicago truncatula] AES93766.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 1084

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 45/80 (56%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = +1

Query: 91  ISMRK--RELKTLPLLCRSLRSFRFSTRQVSQDTHTLQGLLHPDDTVFQ-NLPTPKPTPD 261
           +SMR+  RELKTL       RS +FS+   S   H L GL HP+D+ F  + PTP+   D
Sbjct: 1   MSMRRKNRELKTL-----LSRSLQFSS---SSSKHPLHGLHHPNDSTFSPSTPTPR---D 49

Query: 262 LSQDYAFLRNTLINST-PQS 318
           LSQDYAFLRNTLINST PQS
Sbjct: 50  LSQDYAFLRNTLINSTSPQS 69


>XP_012574336.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Cicer arietinum] XP_012574337.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial [Cicer arietinum]
          Length = 985

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
 Frame = +1

Query: 145 RSFRFSTRQVSQDTHTLQGLLHPDDTVFQNLPTPKPT----PDLSQDYAFLRNTLINSTP 312
           RS  FS+   S   HTL GLLHP+D +F +     P+     DLSQ Y FLRNTL+NSTP
Sbjct: 19  RSLNFSSSSSSSSHHTLPGLLHPNDPIFSDNNNSNPSNPFQNDLSQHYEFLRNTLLNSTP 78


>XP_016187559.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Arachis ipaensis] XP_016187567.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial [Arachis ipaensis]
           XP_016187574.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g06710, mitochondrial
           [Arachis ipaensis] XP_016187583.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Arachis ipaensis] XP_016187590.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial [Arachis ipaensis]
           XP_016187599.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g06710, mitochondrial
           [Arachis ipaensis] XP_016187608.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Arachis ipaensis] XP_016187616.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial [Arachis ipaensis]
           XP_016187624.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g06710, mitochondrial
           [Arachis ipaensis] XP_016187630.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Arachis ipaensis]
          Length = 987

 Score = 56.6 bits (135), Expect = 5e-07
 Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
 Frame = +1

Query: 103 KRELKTLPLLCRSLR--------SFRFSTRQVSQDTHTLQGLLHPDDTVFQNLPTPKPTP 258
           KR+  TL  L RSL         SF       +   +TL+GL+HPDD    +  T  P P
Sbjct: 5   KRDFNTLFSLSRSLLHLKSKIILSFSLPQSFSTSSDNTLEGLVHPDDPFLHH--TSPPAP 62

Query: 259 DLSQDYAFLRNTLINST 309
           DLS DYAFLR TL+NST
Sbjct: 63  DLSPDYAFLRTTLLNST 79


>XP_015960897.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Arachis duranensis] XP_015960902.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial [Arachis duranensis]
          Length = 987

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
 Frame = +1

Query: 103 KRELKTLPLLCRSLR--------SFRFSTRQVSQDTHTLQGLLHPDDTVFQNLPTPKPTP 258
           KR+L T+  L RSL         SF       +   +TL+GL+HPDD    +  T  P P
Sbjct: 5   KRDLNTVFSLSRSLLHLKSKIILSFSLPQSFSTSSDNTLEGLVHPDDPFLHH--TLPPAP 62

Query: 259 DLSQDYAFLRNTLINST 309
           DLS DYAFLR TL+NST
Sbjct: 63  DLSTDYAFLRTTLLNST 79


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