BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00036835
         (695 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN12821.1 Putative ribonuclease H protein, partial [Glycine soja]     66   4e-10
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran...    58   4e-08
KYP59936.1 Putative ribonuclease H protein At1g65750 family [Caj...    55   2e-06

>KHN12821.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 139

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
 Frame = +1

Query: 412 ELRGIFHGLKIACTRGFRKIKVYSDLKVAVELLLHGCHRSHPCATLV-----*HRYKTSI 576
           EL  I+HGLK A  RGFR+I++Y+D    V LL+ GC+  HPC  LV      H +   I
Sbjct: 28  ELWEIYHGLKKAWERGFRRIRIYTDSMNVVSLLMKGCYMIHPCYQLVRSIHDIHHHGGFI 87

Query: 577 ----VKRGLDSLL*RSHALAKFGLSMDSNLHVFNIMSSFISNA 693
               V RG + +   + +LAK   S+ ++ H+F    SFI+NA
Sbjct: 88  YWMHVLRGANQV---ADSLAKHEASLPTSFHIFEFAPSFIANA 127


>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
          Length = 1250

 Score = 58.2 bits (139), Expect(2) = 4e-08
 Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 10/101 (9%)
 Frame = +1

Query: 412  ELRGIFHGLKIACTRGFRKIKVYSDLKVAVELLLHGCHRSHPCATLV*HRYKTSI-VKRG 588
            EL GI +GL++A  +G ++I+V SD  +A+ L+ +GC++ HP   LV    +T++ +  G
Sbjct: 1137 ELWGIINGLELAKNKGLKRIRVESDSMIAINLIRNGCNKEHPAFHLV----QTALRLTEG 1192

Query: 589  LDSLL*R---------SHALAKFGLSMDSNLHVFNIMSSFI 684
            ++S+L +         + ALAKF LS+ +N  +F+ +  F+
Sbjct: 1193 MESVLWQHTWREANQVADALAKFSLSLSNNCIIFDHVPGFL 1233



 Score = 27.3 bits (59), Expect(2) = 4e-08
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +3

Query: 258  VALNCDGAVTQRNNSSVQLQLVGVFCVIALEQVC----LIAFAAQLGDCSVLIAD 410
            +ALNCDGAVT          L G+     + + C    L+AF+A+ G  SV+ A+
Sbjct: 1092 IALNCDGAVT---------GLTGLAGCGGVLRNCHGGFLVAFSARAGSVSVVHAE 1137


>KYP59936.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 116

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
 Frame = +1

Query: 412 ELRGIFHGLKIACTRGFRKIKVYSDLKVAVELLLHGCHRSHPCATLV*HRYKTSIVKRGL 591
           EL  I+ G+  A  RGF K+ V SD  +AV LL +GC   HPC +LV  +   S V  G 
Sbjct: 3   ELWAIYIGITTAWNRGFTKLVVESDSLLAVGLLQNGCSSCHPCFSLV--QSILSFVAAGG 60

Query: 592 D----SLL*RSH----ALAKFGLSMDSNLHVFNIMSSFIS 687
           D     +L  ++     LA +G S+ +NLHVF  +  FIS
Sbjct: 61  DFECRHILREANQVADGLANYGRSLTNNLHVFENVMPFIS 100