BLASTX nr result
ID: Glycyrrhiza30_contig00036435
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00036435
(280 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013452894.1 RNA processing factor 2, putative [Medicago trunc... 67 4e-11
XP_003549125.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 4e-11
GAU35738.1 hypothetical protein TSUD_370030 [Trifolium subterran... 63 1e-10
GAU38663.1 hypothetical protein TSUD_292450 [Trifolium subterran... 66 1e-10
XP_013452896.1 pentatricopeptide (PPR) repeat protein [Medicago ... 65 2e-10
GAU49965.1 hypothetical protein TSUD_290850 [Trifolium subterran... 64 3e-10
XP_013452082.1 pentatricopeptide (PPR) repeat protein [Medicago ... 61 6e-10
GAU35736.1 hypothetical protein TSUD_370010 [Trifolium subterran... 64 9e-10
GAU40441.1 hypothetical protein TSUD_397610 [Trifolium subterran... 62 1e-09
GAU24605.1 hypothetical protein TSUD_289680 [Trifolium subterran... 63 2e-09
XP_013441668.1 pentatricopeptide (PPR) repeat protein [Medicago ... 59 2e-09
XP_016203490.1 PREDICTED: pentatricopeptide repeat-containing pr... 63 2e-09
XP_016200142.1 PREDICTED: pentatricopeptide repeat-containing pr... 63 2e-09
XP_013442116.1 pentatricopeptide (PPR) repeat protein [Medicago ... 59 2e-09
XP_004512723.1 PREDICTED: pentatricopeptide repeat-containing pr... 62 2e-09
GAU32094.1 hypothetical protein TSUD_292180 [Trifolium subterran... 61 3e-09
XP_013457840.1 pentatricopeptide (PPR) repeat protein [Medicago ... 61 3e-09
KYP42429.1 hypothetical protein KK1_036175 [Cajanus cajan] 61 3e-09
XP_015966932.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 4e-09
XP_003620177.2 pentatricopeptide (PPR) repeat protein [Medicago ... 59 4e-09
>XP_013452894.1 RNA processing factor 2, putative [Medicago truncatula] KEH26922.1
RNA processing factor 2, putative [Medicago truncatula]
Length = 541
Score = 67.4 bits (163), Expect = 4e-11
Identities = 29/36 (80%), Positives = 34/36 (94%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGR 110
LFDEAL+LLSKMEDNGC PNA+TY+T+ICALFEN +
Sbjct: 489 LFDEALSLLSKMEDNGCTPNAITYQTLICALFENNK 524
>XP_003549125.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max] XP_014624499.1
PREDICTED: pentatricopeptide repeat-containing protein
At1g62930, chloroplastic-like [Glycine max] KHN31545.1
Pentatricopeptide repeat-containing protein,
chloroplastic [Glycine soja] KRH09154.1 hypothetical
protein GLYMA_16G199700 [Glycine max]
Length = 556
Score = 64.7 bits (156), Expect(2) = 4e-11
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEALALLSKMEDNGCIPNA+T++ IICALFE + K
Sbjct: 504 LFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEK 545
Score = 30.0 bits (66), Expect(2) = 4e-11
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 109 ENGKAEKENLLREMIARGLL 168
EN KAEK LLREMIARGLL
Sbjct: 539 ENDKAEK--LLREMIARGLL 556
>GAU35738.1 hypothetical protein TSUD_370030 [Trifolium subterraneum]
Length = 426
Score = 63.2 bits (152), Expect(2) = 1e-10
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEA LLSKMEDNGCIPNA+TY+TII ALFEN + K
Sbjct: 374 LFDEAAVLLSKMEDNGCIPNAITYQTIIYALFENDENDKAEK 415
Score = 30.0 bits (66), Expect(2) = 1e-10
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 109 ENGKAEKENLLREMIARGLL 168
EN KAEK LLREMIARGLL
Sbjct: 409 ENDKAEK--LLREMIARGLL 426
>GAU38663.1 hypothetical protein TSUD_292450 [Trifolium subterraneum]
Length = 781
Score = 65.9 bits (159), Expect = 1e-10
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEA+ALLSKM+DNGCIP+A+TYE IICALFEN + +K
Sbjct: 667 LFDEAMALLSKMKDNGCIPDAVTYEIIICALFENDENDKAKK 708
Score = 60.5 bits (145), Expect(2) = 4e-09
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEA+ALLSKMEDNGCIP+ +TY+TII LFEN K
Sbjct: 344 LFDEAMALLSKMEDNGCIPDVVTYQTIIYTLFENNENDHAEK 385
Score = 27.7 bits (60), Expect(2) = 4e-09
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 109 ENGKAEKENLLREMIARGLL 168
EN AEK LLREMIARGLL
Sbjct: 379 ENDHAEK--LLREMIARGLL 396
>XP_013452896.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
KEH26924.1 pentatricopeptide (PPR) repeat protein
[Medicago truncatula]
Length = 409
Score = 65.5 bits (158), Expect = 2e-10
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGR 110
LFDEAL+LLSKMEDNGC P+A+TY+T+ICALFEN +
Sbjct: 357 LFDEALSLLSKMEDNGCTPDAITYQTLICALFENNK 392
>GAU49965.1 hypothetical protein TSUD_290850 [Trifolium subterraneum]
Length = 502
Score = 63.5 bits (153), Expect(2) = 3e-10
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEA+ L+SKMEDNGCIPNALTY TII ALFEN + K
Sbjct: 446 LFDEAMVLMSKMEDNGCIPNALTYRTIIYALFENDENDKAEK 487
Score = 28.1 bits (61), Expect(2) = 3e-10
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 109 ENGKAEKENLLREMIARGLL 168
EN KAEK LL EMIARGLL
Sbjct: 481 ENDKAEK--LLHEMIARGLL 498
>XP_013452082.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
KEH26110.1 pentatricopeptide (PPR) repeat protein
[Medicago truncatula]
Length = 456
Score = 60.8 bits (146), Expect(2) = 6e-10
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEA+ LLSKMEDNGCIP+A+TYETII ALF+N + K
Sbjct: 404 LFDEAVTLLSKMEDNGCIPDAVTYETIIRALFKNDENDKAEK 445
Score = 30.0 bits (66), Expect(2) = 6e-10
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 109 ENGKAEKENLLREMIARGLL 168
EN KAEK LLREMIARGLL
Sbjct: 439 ENDKAEK--LLREMIARGLL 456
>GAU35736.1 hypothetical protein TSUD_370010 [Trifolium subterraneum]
Length = 459
Score = 63.5 bits (153), Expect = 9e-10
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEA+ L+SKMEDNGCIPNALTY TII ALFEN + K
Sbjct: 359 LFDEAMVLMSKMEDNGCIPNALTYRTIIYALFENDENDKAEK 400
>GAU40441.1 hypothetical protein TSUD_397610 [Trifolium subterraneum]
Length = 256
Score = 62.4 bits (150), Expect = 1e-09
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LF+EALALLSKMED GCIP+A+T+E +ICALFE+G + K
Sbjct: 204 LFEEALALLSKMEDKGCIPDAITFEILICALFESGENDKAEK 245
>GAU24605.1 hypothetical protein TSUD_289680 [Trifolium subterraneum]
Length = 473
Score = 62.8 bits (151), Expect = 2e-09
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENG 107
LFDEAL+L+SKMEDNGC PNA+TY+T+ICAL +NG
Sbjct: 419 LFDEALSLMSKMEDNGCTPNAVTYKTLICALSKNG 453
>XP_013441668.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
KEH15693.1 pentatricopeptide (PPR) repeat protein
[Medicago truncatula]
Length = 320
Score = 59.3 bits (142), Expect(2) = 2e-09
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEA+ LL KMEDNGCIPNA+TY TII ALF+N + K
Sbjct: 268 LFDEAMTLLEKMEDNGCIPNAVTYATIIHALFKNDENDKAEK 309
Score = 30.0 bits (66), Expect(2) = 2e-09
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 109 ENGKAEKENLLREMIARGLL 168
EN KAEK LLREMIARGLL
Sbjct: 303 ENDKAEK--LLREMIARGLL 320
>XP_016203490.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63130,
mitochondrial-like isoform X2 [Arachis ipaensis]
Length = 556
Score = 62.8 bits (151), Expect = 2e-09
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
L EALAL++KMED+GC+P+A+TYETIICALFENG + K
Sbjct: 502 LLHEALALMTKMEDSGCLPDAVTYETIICALFENGENDKAEK 543
>XP_016200142.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Arachis ipaensis]
Length = 787
Score = 62.8 bits (151), Expect = 2e-09
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
L EALAL++KMED+GC+P+A+TYETIICALFENG + K
Sbjct: 502 LLHEALALMTKMEDSGCLPDAVTYETIICALFENGENDKAEK 543
>XP_013442116.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
KEH16141.1 pentatricopeptide (PPR) repeat protein
[Medicago truncatula]
Length = 541
Score = 59.3 bits (142), Expect(2) = 2e-09
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
L DEALALLSKMEDNGCIPNA+T+E I+ ALF+N + K
Sbjct: 489 LLDEALALLSKMEDNGCIPNAVTFEIIVHALFKNDENEKAEK 530
Score = 29.6 bits (65), Expect(2) = 2e-09
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 109 ENGKAEKENLLREMIARGLL 168
EN KAEK LLREMIARGLL
Sbjct: 524 ENEKAEK--LLREMIARGLL 541
>XP_004512723.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Cicer arietinum] XP_012574713.1
PREDICTED: pentatricopeptide repeat-containing protein
At1g62670, mitochondrial-like [Cicer arietinum]
Length = 547
Score = 62.4 bits (150), Expect = 2e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGR 110
LFDE LALLSKMEDNGCIP+A+TYE +I ALFE G+
Sbjct: 495 LFDEVLALLSKMEDNGCIPDAITYEIVILALFEKGK 530
>GAU32094.1 hypothetical protein TSUD_292180 [Trifolium subterraneum]
Length = 498
Score = 61.2 bits (147), Expect(2) = 3e-09
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENG 107
+F+EALALLSKMED GCIP+A+T+E IICALFE+G
Sbjct: 446 MFEEALALLSKMEDKGCIPDAVTFEIIICALFESG 480
Score = 27.3 bits (59), Expect(2) = 3e-09
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 109 ENGKAEKENLLREMIARGLL 168
EN KA K LLREMIARGLL
Sbjct: 481 ENDKAVK--LLREMIARGLL 498
>XP_013457840.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
KEH31871.1 pentatricopeptide (PPR) repeat protein
[Medicago truncatula]
Length = 440
Score = 61.2 bits (147), Expect(2) = 3e-09
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGR 110
LFD+AL+L+SKMEDN C PNA+TYET+I ALFENG+
Sbjct: 388 LFDDALSLVSKMEDNSCTPNAVTYETLIRALFENGK 423
Score = 27.3 bits (59), Expect(2) = 3e-09
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +1
Query: 103 MVENGKAEKE-NLLREMIARGLL 168
+ ENGK +K LLREMI RG+L
Sbjct: 418 LFENGKNDKTVKLLREMIVRGIL 440
>KYP42429.1 hypothetical protein KK1_036175 [Cajanus cajan]
Length = 246
Score = 61.2 bits (147), Expect = 3e-09
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENGREWQGRK 128
LFDEALA+ SKMEDNGCIPN +T+E IICALFE + + K
Sbjct: 194 LFDEALAMKSKMEDNGCIPNVVTFERIICALFETDEKDKAEK 235
>XP_015966932.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Arachis duranensis]
Length = 554
Score = 57.8 bits (138), Expect(2) = 4e-09
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFENG 107
L EALAL++KMED+GC+P+A+TYETII ALFENG
Sbjct: 500 LLQEALALMTKMEDSGCLPDAVTYETIIRALFENG 534
Score = 30.4 bits (67), Expect(2) = 4e-09
Identities = 15/25 (60%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = +1
Query: 103 MVENGKAEK-ENLLREMIARGLLRK 174
+ ENG+ +K E LLREMI+RGLL++
Sbjct: 530 LFENGENDKAEQLLREMISRGLLQR 554
>XP_003620177.2 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
AES76395.2 pentatricopeptide (PPR) repeat protein
[Medicago truncatula]
Length = 543
Score = 58.9 bits (141), Expect(2) = 4e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3
Query: 3 LFDEALALLSKMEDNGCIPNALTYETIICALFE 101
LFD+ALALLSKMEDNGCIPNA TYE II +LFE
Sbjct: 491 LFDKALALLSKMEDNGCIPNAKTYEIIILSLFE 523
Score = 29.3 bits (64), Expect(2) = 4e-09
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 79 QLFVLSL-KMVENGKAEKENLLREMIARGLL 168
++ +LSL + EN AEK LLREMIARGLL
Sbjct: 515 EIIILSLFEKDENDMAEK--LLREMIARGLL 543